RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
SLIT3-201ENST00000332966 SYCP2Q9BX26 1530 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 CBX8Q9HC52 389 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
SLIT3-201ENST00000332966 GOLGA8BA8MQT2 603 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 YEATS4O95619 227 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
SLIT3-201ENST00000332966 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 POLR3DP05423 398 aaPredicted RBP18.36■□□□□ 0.53
SLIT3-201ENST00000332966 FBLN1P23142 703 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 SYKP43405 635 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 GPATCH11Q8N954 259 aa18.36■□□□□ 0.53
SLIT3-201ENST00000332966 CEP112Q8N8E3 955 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 NUP133Q8WUM0 1156 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 CLSTN2Q9H4D0 955 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 KDM6BO15054 1643 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
SLIT3-201ENST00000332966 RSPH14Q9UHP6 348 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 KDM5BQ9UGL1 1544 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 IDI1Q13907 227 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 SPA17Q15506 151 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 ISM2Q6H9L7 571 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 KDM5DQ9BY66 1539 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
SLIT3-201ENST00000332966 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 MAGI2Q86UL8 1455 aa18.35■□□□□ 0.53
SLIT3-201ENST00000332966 CTAGE15A4D2H0 777 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 PI4KAP2A4QPH2 592 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 CTAGE8P0CG41 777 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 ELF2Q15723 593 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 CTAGE6Q86UF2 777 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 CTAGE4Q8IX94 777 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 SOS1Q07889 1333 aaPredicted RBP18.34■□□□□ 0.53
SLIT3-201ENST00000332966 MSH6P52701 1360 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 CREB3L3Q68CJ9 461 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 IFNKQ9P0W0 207 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 AOX1Q06278 1338 aa18.34■□□□□ 0.53
SLIT3-201ENST00000332966 MNAT1P51948 309 aa18.33■□□□□ 0.53
SLIT3-201ENST00000332966 ATL3Q6DD88 541 aa18.33■□□□□ 0.53
SLIT3-201ENST00000332966 KANK3Q6NY19 840 aa18.33■□□□□ 0.53
SLIT3-201ENST00000332966 KIAA0556O60303 1618 aa18.33■□□□□ 0.53
SLIT3-201ENST00000332966 ADGRL1O94910 1474 aa18.33■□□□□ 0.53
SLIT3-201ENST00000332966 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.53
SLIT3-201ENST00000332966 TUBBP07437 444 aa18.33■□□□□ 0.53
SLIT3-201ENST00000332966 RTL1A6NKG5 1358 aa18.33■□□□□ 0.52
SLIT3-201ENST00000332966 IFIT1P09914 478 aaKnown RBP18.33■□□□□ 0.52
SLIT3-201ENST00000332966 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
SLIT3-201ENST00000332966 C10orf67Q8IYJ2 551 aa18.33■□□□□ 0.52
SLIT3-201ENST00000332966 CDK5RAP3Q96JB5 506 aa18.33■□□□□ 0.52
SLIT3-201ENST00000332966 ZFP91Q96JP5 570 aaPredicted RBP18.33■□□□□ 0.52
SLIT3-201ENST00000332966 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
SLIT3-201ENST00000332966 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
SLIT3-201ENST00000332966 SNX14Q9Y5W7 946 aa18.32■□□□□ 0.52
SLIT3-201ENST00000332966 UBAC1Q9BSL1 405 aa18.32■□□□□ 0.52
SLIT3-201ENST00000332966 PAFAH1B1P43034 410 aa18.32■□□□□ 0.52
SLIT3-201ENST00000332966 Q6ZUG5 572 aa18.32■□□□□ 0.52
SLIT3-201ENST00000332966 CCDC175P0C221 793 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 EVCP57679 992 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 TTC31Q49AM3 519 aaPredicted RBP18.31■□□□□ 0.52
SLIT3-201ENST00000332966 PHAXQ9H814 394 aaKnown RBP18.31■□□□□ 0.52
SLIT3-201ENST00000332966 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 CCDC196A0A1B0GTZ2 297 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 KRBA2Q6ZNG9 492 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 ABCC4O15439 1325 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 ZNF213O14771 459 aa18.31■□□□□ 0.52
SLIT3-201ENST00000332966 RAD50Q92878 1312 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
SLIT3-201ENST00000332966 FAM160A1Q05DH4 1040 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 TAF4BQ92750 862 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 TRAPPC8Q9Y2L5 1435 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 TATP17735 454 aaPredicted RBP18.3■□□□□ 0.52
SLIT3-201ENST00000332966 HSPA4P34932 840 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 VPS18Q9P253 973 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 IMPACTQ9P2X3 320 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 SGSM2O43147 1006 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
SLIT3-201ENST00000332966 EHBP1Q8NDI1 1231 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 MAP3K2Q9Y2U5 619 aa18.3■□□□□ 0.52
SLIT3-201ENST00000332966 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 RNF187Q5TA31 235 aaPredicted RBP18.29■□□□□ 0.52
SLIT3-201ENST00000332966 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 AKAP2Q9Y2D5 859 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 MBD5Q9P267 1494 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 SPTLC2O15270 562 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 CPA1P15085 419 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 HSP90AB2PQ58FF8 381 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 PTPRTO14522 1441 aa18.29■□□□□ 0.52
SLIT3-201ENST00000332966 CKAP4Q07065 602 aaKnown RBP18.28■□□□□ 0.52
SLIT3-201ENST00000332966 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
SLIT3-201ENST00000332966 SSH2Q76I76 1423 aa18.28■□□□□ 0.52
SLIT3-201ENST00000332966 RAPGEF3O95398 923 aa18.28■□□□□ 0.52
SLIT3-201ENST00000332966 LIG1P18858 919 aa18.28■□□□□ 0.52
SLIT3-201ENST00000332966 PLCH2O75038 1416 aa18.28■□□□□ 0.52
SLIT3-201ENST00000332966 CTAGE9A4FU28 777 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms