RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 NBR1Q14596 966 aa3.4□□□□□ -1.86
RGPD6-201ENST00000329516 PPP1R9BQ96SB3 815 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 CFDP1Q9UEE9 299 aaPredicted RBP3.4□□□□□ -1.87
RGPD6-201ENST00000329516 AOX1Q06278 1338 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 SASH1O94885 1247 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 CENPEQ02224 2701 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 RFX7Q2KHR2 1363 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 EIF5BO60841 1220 aaKnown RBP3.4□□□□□ -1.87
RGPD6-201ENST00000329516 TFRCP02786 760 aaKnown RBP3.4□□□□□ -1.87
RGPD6-201ENST00000329516 MTX1Q13505 466 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 VOPP1Q96AW1 172 aa3.4□□□□□ -1.87
RGPD6-201ENST00000329516 ZNF609O15014 1411 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 FDPSP14324 419 aaKnown RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 INTS3Q68E01 1043 aaKnown RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NUMBLQ9Y6R0 609 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 SCN4AP35499 1836 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 TULP2O00295 520 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NCAPHQ15003 741 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 WDR43Q15061 677 aaKnown RBP eCLIP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 ZBTB7CA1YPR0 619 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NBPF26B4DH59 902 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 RBM6P78332 1123 aaKnown RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 FUT2Q10981 343 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 GLIPR1L2Q4G1C9 344 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NBPF14Q5TI25 921 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NBPF10Q6P3W6 841 aaKnown RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NBPF15Q8N660 670 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 ANKRD44Q8N8A2 993 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 KDM4FA0A1W2PPD8 638 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 PSEN1P49768 467 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 EVCP57679 992 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NUCB1Q02818 461 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 ADCK5Q3MIX3 580 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 TRIM44Q96DX7 344 aaPredicted RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 DNHD1Q96M86 4753 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 COL11A1P12107 1806 aaPredicted RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 EML5Q05BV3 1969 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 GIGYF1O75420 1035 aaPredicted RBP3.39□□□□□ -1.87
RGPD6-201ENST00000329516 TCP11L2Q8N4U5 519 aa3.39□□□□□ -1.87
RGPD6-201ENST00000329516 NOVP48745 357 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 USPL1Q5W0Q7 1092 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 ZGPATQ8N5A5 531 aaKnown RBP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 CHMLP26374 656 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 FBLN2P98095 1184 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 RTL5Q5HYW3 569 aaPredicted RBP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 SCARA3Q6AZY7 606 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 GZF1Q9H116 711 aaPredicted RBP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 MKRN1Q9UHC7 482 aaKnown RBP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 BAZ2BQ9UIF8 2168 aaKnown RBP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 EIF4G2P78344 907 aaKnown RBP eCLIP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 PPP6R1Q9UPN7 881 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 M0R2N6 131 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 NCLP19338 710 aaKnown RBP3.38□□□□□ -1.87
RGPD6-201ENST00000329516 ENGASEQ8NFI3 743 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 AFG3L2Q9Y4W6 797 aa3.38□□□□□ -1.87
RGPD6-201ENST00000329516 TNNT2P45379 298 aaPredicted RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 EIF4A2Q14240 407 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 HSP90AB2PQ58FF8 381 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 MBIPQ9NS73 344 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 PTPRSQ13332 1948 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 ATG14Q6ZNE5 492 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 STK36Q9NRP7 1315 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 FGD1P98174 961 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 SNW1Q13573 536 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 IPO9Q96P70 1041 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 G3V3G9 751 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 SMARCA5O60264 1052 aaPredicted RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 NOP2P46087 812 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 DCAF8Q5TAQ9 597 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 CSF1RP07333 972 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 SOS1Q07889 1333 aaPredicted RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 MAP3K13O43283 966 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 CALRP27797 417 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 TMPOP42166 694 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 DPYDQ12882 1025 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 SPRED3Q2MJR0 410 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 UBAP2Q5T6F2 1119 aaKnown RBP3.37□□□□□ -1.87
RGPD6-201ENST00000329516 KCNN1Q92952 543 aa3.37□□□□□ -1.87
RGPD6-201ENST00000329516 MTHFSP49914 203 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 AK7Q96M32 723 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 PGAP2Q9UHJ9 254 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 ANKFY1Q9P2R3 1169 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 NID2Q14112 1375 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 MYH4Q9Y623 1939 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 POTEFA5A3E0 1075 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 NME9Q86XW9 330 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 PPP4R2Q9NY27 417 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 CCDC93Q567U6 631 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 TRIM63Q969Q1 353 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 STAP2Q9UGK3 403 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 SENP2Q9HC62 589 aa3.36□□□□□ -1.87
RGPD6-201ENST00000329516 GTF2F1P35269 517 aaKnown RBP eCLIP3.35□□□□□ -1.87
RGPD6-201ENST00000329516 RAB3GAP1Q15042 981 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 TLR7Q9NYK1 1049 aaKnown RBP3.35□□□□□ -1.87
RGPD6-201ENST00000329516 PPM1GO15355 546 aaPredicted RBP3.35□□□□□ -1.87
RGPD6-201ENST00000329516 SP100P23497 879 aaPredicted RBP3.35□□□□□ -1.87
RGPD6-201ENST00000329516 DCTN1Q14203 1278 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 RABEP1Q15276 862 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 PPP1R1BQ9UD71 204 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms