RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 SYT9Q86SS6 491 aa7.22□□□□□ -1.25
SKP1-201ENST00000328392 VTI1AQ96AJ9 217 aa7.22□□□□□ -1.25
SKP1-201ENST00000328392 SCARF2Q96GP6 870 aaPredicted RBP7.22□□□□□ -1.25
SKP1-201ENST00000328392 BTBD6Q96KE9 485 aa7.22□□□□□ -1.25
SKP1-201ENST00000328392 LRFN2Q9ULH4 789 aa7.22□□□□□ -1.25
SKP1-201ENST00000328392 KCNH4Q9UQ05 1017 aa7.22□□□□□ -1.25
SKP1-201ENST00000328392 GRNP28799 593 aaKnown RBP7.21□□□□□ -1.26
SKP1-201ENST00000328392 SPEM2Q0P670 501 aa7.21□□□□□ -1.26
SKP1-201ENST00000328392 MKNK1Q9BUB5 465 aa7.21□□□□□ -1.26
SKP1-201ENST00000328392 RRAGCQ9HB90 399 aa7.21□□□□□ -1.26
SKP1-201ENST00000328392 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
SKP1-201ENST00000328392 AMPD1P23109 780 aa7.2□□□□□ -1.26
SKP1-201ENST00000328392 KCNQ4P56696 695 aa7.2□□□□□ -1.26
SKP1-201ENST00000328392 AEBP1Q8IUX7 1158 aa7.2□□□□□ -1.26
SKP1-201ENST00000328392 MYO19Q96H55 970 aa7.2□□□□□ -1.26
SKP1-201ENST00000328392 SAP130Q9H0E3 1048 aa7.2□□□□□ -1.26
SKP1-201ENST00000328392 AVENQ9NQS1 362 aaPredicted RBP7.2□□□□□ -1.26
SKP1-201ENST00000328392 CXXC1Q9P0U4 656 aaPredicted RBP7.2□□□□□ -1.26
SKP1-201ENST00000328392 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
SKP1-201ENST00000328392 GDF11O95390 407 aa7.19□□□□□ -1.26
SKP1-201ENST00000328392 TRIM26Q12899 539 aaPredicted RBP7.19□□□□□ -1.26
SKP1-201ENST00000328392 HIF1AQ16665 826 aa7.19□□□□□ -1.26
SKP1-201ENST00000328392 COX20Q5RI15 118 aa7.19□□□□□ -1.26
SKP1-201ENST00000328392 IER5Q5VY09 327 aa7.19□□□□□ -1.26
SKP1-201ENST00000328392 TMEM151AQ8N4L1 468 aa7.19□□□□□ -1.26
SKP1-201ENST00000328392 BEND7Q8N7W2 519 aaPredicted RBP7.19□□□□□ -1.26
SKP1-201ENST00000328392 INPP5BP32019 993 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 IDH3AP50213 366 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 NAA30Q147X3 362 aaPredicted RBP7.18□□□□□ -1.26
SKP1-201ENST00000328392 C11orf91Q3C1V1 193 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 LINC00114Q6XXX2 140 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 CHSY3Q70JA7 882 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 KCTD17Q8N5Z5 321 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 CLP1Q92989 425 aaKnown RBP7.18□□□□□ -1.26
SKP1-201ENST00000328392 MDFIQ99750 246 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 USP20Q9Y2K6 914 aa7.18□□□□□ -1.26
SKP1-201ENST00000328392 SIN3BO75182 1162 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 MICAL2O94851 1124 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 SCNN1AP37088 669 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 BHMTQ93088 406 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 IFT43Q96FT9 208 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 GSX2Q9BZM3 304 aa7.17□□□□□ -1.26
SKP1-201ENST00000328392 ELOA3CA0A087WX78 387 aaPredicted RBP7.16□□□□□ -1.26
SKP1-201ENST00000328392 ELOA3DA6NLF2 546 aaPredicted RBP7.16□□□□□ -1.26
SKP1-201ENST00000328392 PHF20L1A8MW92 1017 aa7.16□□□□□ -1.26
SKP1-201ENST00000328392 OPLAHO14841 1288 aa7.16□□□□□ -1.26
SKP1-201ENST00000328392 ELOA3BQ3SY89 546 aa7.16□□□□□ -1.26
SKP1-201ENST00000328392 ELOA3Q8NG57 546 aa7.16□□□□□ -1.26
SKP1-201ENST00000328392 SUV39H2Q9H5I1 410 aa7.16□□□□□ -1.26
SKP1-201ENST00000328392 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.263e-6■■■■■ 37.2
SKP1-201ENST00000328392 ATP2B4P23634 1241 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 DGKGP49619 791 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 KANK3Q6NY19 840 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 TREML1Q86YW5 311 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 ETFBKMTQ8IXQ9 262 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 SEPT3Q9UH03 358 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 MKL2Q9ULH7 1088 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 STARD13Q9Y3M8 1113 aa7.15□□□□□ -1.26
SKP1-201ENST00000328392 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 TNFRSF10BO14763 440 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 COL8A1P27658 744 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 ARSDP51689 593 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 C16orf46Q6P387 395 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 TNFRSF25Q93038 417 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 IGFLR1Q9H665 355 aa7.14□□□□□ -1.27
SKP1-201ENST00000328392 NFKB1P19838 968 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 ADH7P40394 386 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 TBC1D8BQ0IIM8 1120 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 NEUROD1Q13562 356 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 CCINQ13939 588 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 KRT25Q7Z3Z0 450 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 COL26A1Q96A83 441 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 DCAF5Q96JK2 942 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
SKP1-201ENST00000328392 ALAS2P22557 587 aa7.12□□□□□ -1.27
SKP1-201ENST00000328392 TARSP26639 723 aaKnown RBP7.12□□□□□ -1.27
SKP1-201ENST00000328392 C8orf86Q6ZUL3 223 aa7.12□□□□□ -1.27
SKP1-201ENST00000328392 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
SKP1-201ENST00000328392 PODXL2Q9NZ53 605 aa7.12□□□□□ -1.27
SKP1-201ENST00000328392 RTCBQ9Y3I0 505 aaKnown RBP7.12□□□□□ -1.27
SKP1-201ENST00000328392 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
SKP1-201ENST00000328392 ZBTB7CA1YPR0 619 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 ZBTB39O15060 712 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 SASH3O75995 380 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 ALBP02768 609 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 ITGB2P05107 769 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 EPB42P16452 691 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
SKP1-201ENST00000328392 TRIM11Q96F44 468 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 PNMA5Q96PV4 448 aa7.11□□□□□ -1.27
SKP1-201ENST00000328392 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
SKP1-201ENST00000328392 KRBA1A5PL33 1030 aa7.1□□□□□ -1.27
SKP1-201ENST00000328392 GNB5O14775 395 aa7.1□□□□□ -1.27
SKP1-201ENST00000328392 PTCD1O75127 700 aaKnown RBP7.1□□□□□ -1.27
SKP1-201ENST00000328392 BRD2P25440 801 aaKnown RBP7.1□□□□□ -1.27
SKP1-201ENST00000328392 COL9A3Q14050 684 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms