RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PIK3C2AO00443 1686 aa19.88■□□□□ 0.77
SSH1-201ENST00000326470 NLRP6P59044 892 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 MAP4K1Q92918 833 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 CEMIPQ8WUJ3 1361 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 PSMA5P28066 241 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 FERMT3Q86UX7 667 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
SSH1-201ENST00000326470 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 SCAND2PQ9GZW5 306 aaPredicted RBP19.87■□□□□ 0.77
SSH1-201ENST00000326470 TNMDQ9H2S6 317 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 CHMP3Q9Y3E7 222 aa19.87■□□□□ 0.77
SSH1-201ENST00000326470 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
SSH1-201ENST00000326470 IFIT2P09913 472 aaKnown RBP19.86■□□□□ 0.77
SSH1-201ENST00000326470 ERC1Q8IUD2 1116 aa19.86■□□□□ 0.77
SSH1-201ENST00000326470 CBX8Q9HC52 389 aa19.86■□□□□ 0.77
SSH1-201ENST00000326470 ZHX1Q9UKY1 873 aaPredicted RBP19.86■□□□□ 0.77
SSH1-201ENST00000326470 FAM173BQ6P4H8 233 aa19.86■□□□□ 0.77
SSH1-201ENST00000326470 RBM43Q6ZSC3 357 aaKnown RBP19.86■□□□□ 0.77
SSH1-201ENST00000326470 CCDC186Q7Z3E2 898 aa19.86■□□□□ 0.77
SSH1-201ENST00000326470 DDX19AQ9NUU7 478 aaKnown RBP19.86■□□□□ 0.77
SSH1-201ENST00000326470 DACT1Q9NYF0 836 aa19.86■□□□□ 0.77
SSH1-201ENST00000326470 KCNJ4P48050 445 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 ANO6Q4KMQ2 910 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 HIP1O00291 1037 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 ANKRD1Q15327 319 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 CKAP2LQ8IYA6 745 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 SNRKQ9NRH2 765 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 NPHP3Q7Z494 1330 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 ADCY9O60503 1353 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
SSH1-201ENST00000326470 SLC27A2O14975 620 aa19.84■□□□□ 0.77
SSH1-201ENST00000326470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.84■□□□□ 0.77
SSH1-201ENST00000326470 PLA2G4DQ86XP0 818 aa19.84■□□□□ 0.77
SSH1-201ENST00000326470 GOLGA6L4A6NEF3 574 aa19.84■□□□□ 0.77
SSH1-201ENST00000326470 SYCP1Q15431 976 aa19.84■□□□□ 0.77
SSH1-201ENST00000326470 TDRD7Q8NHU6 1098 aaKnown RBP19.84■□□□□ 0.77
SSH1-201ENST00000326470 SPATA32Q96LK8 384 aa19.84■□□□□ 0.77
SSH1-201ENST00000326470 ALDH8A1Q9H2A2 487 aaPredicted RBP19.84■□□□□ 0.77
SSH1-201ENST00000326470 AMOTL2Q9Y2J4 779 aa19.84■□□□□ 0.77
SSH1-201ENST00000326470 ZNF75DP51815 510 aa19.83■□□□□ 0.77
SSH1-201ENST00000326470 LTV1Q96GA3 475 aaPredicted RBP19.83■□□□□ 0.77
SSH1-201ENST00000326470 FAM227BQ96M60 508 aa19.83■□□□□ 0.77
SSH1-201ENST00000326470 CLSTN2Q9H4D0 955 aa19.83■□□□□ 0.77
SSH1-201ENST00000326470 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.76
SSH1-201ENST00000326470 SPDYE4A6NLX3 237 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.76
SSH1-201ENST00000326470 LRMPQ12912 555 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 BLOC1S2Q6QNY1 142 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 AACSQ86V21 672 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 DRC7Q8IY82 874 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
SSH1-201ENST00000326470 TRIM5Q9C035 493 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 MED1Q15648 1581 aaPredicted RBP19.82■□□□□ 0.76
SSH1-201ENST00000326470 SMTNL1A8MU46 457 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 COL9A3Q14050 684 aaPredicted RBP19.82■□□□□ 0.76
SSH1-201ENST00000326470 ZSCAN25Q6NSZ9 544 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 FEZ1Q99689 392 aa19.82■□□□□ 0.76
SSH1-201ENST00000326470 PA2G4Q9UQ80 394 aaKnown RBP19.82■□□□□ 0.76
SSH1-201ENST00000326470 ALDH1L1O75891 902 aa19.81■□□□□ 0.76
SSH1-201ENST00000326470 RPS6KB1P23443 525 aa19.81■□□□□ 0.76
SSH1-201ENST00000326470 NCBP1Q09161 790 aaKnown RBP19.81■□□□□ 0.76
SSH1-201ENST00000326470 RNF20Q5VTR2 975 aa19.81■□□□□ 0.76
SSH1-201ENST00000326470 LARP1Q6PKG0 1096 aaKnown RBP19.81■□□□□ 0.76
SSH1-201ENST00000326470 NRBP1Q9UHY1 535 aa19.81■□□□□ 0.76
SSH1-201ENST00000326470 ANXA1P04083 346 aa19.81■□□□□ 0.76
SSH1-201ENST00000326470 C9orf78Q9NZ63 289 aaPredicted RBP19.81■□□□□ 0.76
SSH1-201ENST00000326470 TFIP11Q9UBB9 837 aaKnown RBP19.81■□□□□ 0.76
SSH1-201ENST00000326470 HDAC5Q9UQL6 1122 aa19.81■□□□□ 0.76
SSH1-201ENST00000326470 KIF20AO95235 890 aa19.8■□□□□ 0.76
SSH1-201ENST00000326470 USHBP1Q8N6Y0 703 aa19.8■□□□□ 0.76
SSH1-201ENST00000326470 C16orf45Q96MC5 204 aaPredicted RBP19.8■□□□□ 0.76
SSH1-201ENST00000326470 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
SSH1-201ENST00000326470 NPHP4O75161 1426 aaPredicted RBP19.8■□□□□ 0.76
SSH1-201ENST00000326470 TOB2Q14106 344 aaPredicted RBP19.8■□□□□ 0.76
SSH1-201ENST00000326470 KCNQ3O43525 872 aa19.79■□□□□ 0.76
SSH1-201ENST00000326470 ZNF165P49910 485 aa19.79■□□□□ 0.76
SSH1-201ENST00000326470 CAVIN2O95810 425 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 TNNT1P13805 278 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 NUTM2GQ5VZR2 741 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 PAXBP1Q9Y5B6 917 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 NR1I2O75469 434 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 PGBD1Q96JS3 809 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 TCEANC2Q96MN5 208 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 DBF4Q9UBU7 674 aaPredicted RBP19.78■□□□□ 0.76
SSH1-201ENST00000326470 KDM3BQ7LBC6 1761 aa19.78■□□□□ 0.76
SSH1-201ENST00000326470 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.76
SSH1-201ENST00000326470 A0A0D9SFI3 127 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 GIGYF1O75420 1035 aaPredicted RBP19.77■□□□□ 0.76
SSH1-201ENST00000326470 TSGA10IPQ3SY00 556 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 EAF2Q96CJ1 260 aaPredicted RBP19.77■□□□□ 0.76
SSH1-201ENST00000326470 MAP3K2Q9Y2U5 619 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 MED23Q9ULK4 1368 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 SASH1O94885 1247 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 CDC25BP30305 580 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 DNAJC25Q9H1X3 360 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 OGFRQ9NZT2 677 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 HMG20BQ9P0W2 317 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 CLIP2Q9UDT6 1046 aa19.77■□□□□ 0.76
SSH1-201ENST00000326470 MARF1Q9Y4F3 1742 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms