RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 NUP188Q5SRE5 1749 aa23.51■■□□□ 1.35
CHMP6-201ENST00000325167 H7C1W4 665 aa23.51■■□□□ 1.35
CHMP6-201ENST00000325167 K7ELQ4 463 aaPredicted RBP23.51■■□□□ 1.35
CHMP6-201ENST00000325167 A1BGP04217 495 aa23.51■■□□□ 1.35
CHMP6-201ENST00000325167 PIP4K2AP48426 406 aaPredicted RBP23.51■■□□□ 1.35
CHMP6-201ENST00000325167 CIZ1Q9ULV3 898 aaPredicted RBP23.51■■□□□ 1.35
CHMP6-201ENST00000325167 BCL9O00512 1426 aa23.5■■□□□ 1.35
CHMP6-201ENST00000325167 ANAPC15P60006 121 aa23.5■■□□□ 1.35
CHMP6-201ENST00000325167 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
CHMP6-201ENST00000325167 ATG3Q9NT62 314 aa23.5■■□□□ 1.35
CHMP6-201ENST00000325167 PA2G4Q9UQ80 394 aaKnown RBP23.5■■□□□ 1.35
CHMP6-201ENST00000325167 ST18O60284 1047 aa23.49■■□□□ 1.35
CHMP6-201ENST00000325167 CASP7P55210 303 aa23.49■■□□□ 1.35
CHMP6-201ENST00000325167 SPATA31A1Q5TZJ5 1347 aa23.49■■□□□ 1.35
CHMP6-201ENST00000325167 AACSQ86V21 672 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 FAM182BQ5T319 152 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 KIF6Q6ZMV9 814 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 TTLL7Q6ZT98 887 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 RUFY2Q8WXA3 655 aa23.48■■□□□ 1.35
CHMP6-201ENST00000325167 THSD7AQ9UPZ6 1657 aa23.47■■□□□ 1.35
CHMP6-201ENST00000325167 ITGB4P16144 1822 aa23.47■■□□□ 1.35
CHMP6-201ENST00000325167 SASH1O94885 1247 aa23.47■■□□□ 1.35
CHMP6-201ENST00000325167 TRIM28Q13263 835 aaKnown RBP23.47■■□□□ 1.35
CHMP6-201ENST00000325167 ASAP1Q9ULH1 1129 aa23.47■■□□□ 1.35
CHMP6-201ENST00000325167 HIP1O00291 1037 aa23.46■■□□□ 1.35
CHMP6-201ENST00000325167 EPHA10Q5JZY3 1008 aa23.46■■□□□ 1.35
CHMP6-201ENST00000325167 HSP90AA1P07900 732 aaKnown RBP23.45■■□□□ 1.34
CHMP6-201ENST00000325167 EVI5LQ96CN4 794 aa23.45■■□□□ 1.34
CHMP6-201ENST00000325167 IL17RAQ96F46 866 aa23.45■■□□□ 1.34
CHMP6-201ENST00000325167 RFX5P48382 616 aaPredicted RBP23.44■■□□□ 1.34
CHMP6-201ENST00000325167 DEFB132Q7Z7B7 95 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 AK9Q5TCS8 1911 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 MCM2P49736 904 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 TCIRG1Q13488 830 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 HSP90AB3PQ58FF7 597 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 DNAJC10Q8IXB1 793 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 ANO2Q9NQ90 1003 aa23.44■■□□□ 1.34
CHMP6-201ENST00000325167 PTPN12Q05209 780 aaKnown RBP23.43■■□□□ 1.34
CHMP6-201ENST00000325167 DDB1Q16531 1140 aa23.43■■□□□ 1.34
CHMP6-201ENST00000325167 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
CHMP6-201ENST00000325167 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
CHMP6-201ENST00000325167 ZBTB3Q9H5J0 574 aa23.42■■□□□ 1.34
CHMP6-201ENST00000325167 SGSM2O43147 1006 aa23.41■■□□□ 1.34
CHMP6-201ENST00000325167 SF3B2Q13435 895 aaKnown RBP23.41■■□□□ 1.34
CHMP6-201ENST00000325167 EAF2Q96CJ1 260 aaPredicted RBP23.41■■□□□ 1.34
CHMP6-201ENST00000325167 DIAPH3Q9NSV4 1193 aa23.41■■□□□ 1.34
CHMP6-201ENST00000325167 DDIT3P35638 169 aa23.41■■□□□ 1.34
CHMP6-201ENST00000325167 KIAA1211Q6ZU35 1233 aa23.41■■□□□ 1.34
CHMP6-201ENST00000325167 SIL1Q9H173 461 aa23.41■■□□□ 1.34
CHMP6-201ENST00000325167 FOXO4P98177 505 aa23.4■■□□□ 1.34
CHMP6-201ENST00000325167 LMBR1LQ6UX01 489 aa23.4■■□□□ 1.34
CHMP6-201ENST00000325167 MAP3K15Q6ZN16 1313 aa23.4■■□□□ 1.34
CHMP6-201ENST00000325167 FBXO3Q9UK99 471 aa23.39■■□□□ 1.34
CHMP6-201ENST00000325167 TJP1Q07157 1748 aa23.39■■□□□ 1.33
CHMP6-201ENST00000325167 FRAT2O75474 233 aaPredicted RBP23.38■■□□□ 1.33
CHMP6-201ENST00000325167 CYP19A1P11511 503 aaPredicted RBP23.38■■□□□ 1.33
CHMP6-201ENST00000325167 SPRYD3Q8NCJ5 442 aa23.38■■□□□ 1.33
CHMP6-201ENST00000325167 GPR108Q9NPR9 543 aa23.38■■□□□ 1.33
CHMP6-201ENST00000325167 SRCAPQ6ZRS2 3230 aa23.38■■□□□ 1.33
CHMP6-201ENST00000325167 RAD50Q92878 1312 aa23.37■■□□□ 1.33
CHMP6-201ENST00000325167 PCCAP05165 728 aaPredicted RBP23.37■■□□□ 1.33
CHMP6-201ENST00000325167 TNNI3KQ59H18 835 aa23.37■■□□□ 1.33
CHMP6-201ENST00000325167 GIGYF2Q6Y7W6 1299 aaKnown RBP23.37■■□□□ 1.33
CHMP6-201ENST00000325167 TICAM2Q86XR7 235 aa23.37■■□□□ 1.33
CHMP6-201ENST00000325167 PLA2G12BQ9BX93 195 aa23.37■■□□□ 1.33
CHMP6-201ENST00000325167 FPGT-TNNI3KV9GXZ4 949 aa23.37■■□□□ 1.33
CHMP6-201ENST00000325167 CIAO1O76071 339 aa23.36■■□□□ 1.33
CHMP6-201ENST00000325167 CD2BP2O95400 341 aaKnown RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 MAP4K4O95819 1239 aaPredicted RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 HSPA4P34932 840 aa23.36■■□□□ 1.33
CHMP6-201ENST00000325167 IL6STP40189 918 aaPredicted RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 IL15P40933 162 aaPredicted RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 SYTL4Q96C24 671 aaPredicted RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 CCDC8Q9H0W5 538 aaPredicted RBP23.36■■□□□ 1.33
CHMP6-201ENST00000325167 DOT1LQ8TEK3 1739 aa23.35■■□□□ 1.33
CHMP6-201ENST00000325167 ERVV-1B6SEH8 477 aa23.35■■□□□ 1.33
CHMP6-201ENST00000325167 ATP5JP18859 108 aa23.35■■□□□ 1.33
CHMP6-201ENST00000325167 CWC22Q9HCG8 908 aaKnown RBP23.35■■□□□ 1.33
CHMP6-201ENST00000325167 CHMP3Q9Y3E7 222 aa23.35■■□□□ 1.33
CHMP6-201ENST00000325167 RFX7Q2KHR2 1363 aa23.35■■□□□ 1.33
CHMP6-201ENST00000325167 KLHDC4Q8TBB5 520 aa23.35■■□□□ 1.33
CHMP6-201ENST00000325167 JARID2Q92833 1246 aaPredicted RBP23.35■■□□□ 1.33
CHMP6-201ENST00000325167 ZBTB38Q8NAP3 1195 aaPredicted RBP23.34■■□□□ 1.33
CHMP6-201ENST00000325167 CDHR2Q9BYE9 1310 aa23.34■■□□□ 1.33
CHMP6-201ENST00000325167 TFCP2Q12800 502 aa23.33■■□□□ 1.33
CHMP6-201ENST00000325167 ZNF330Q9Y3S2 320 aaPredicted RBP23.33■■□□□ 1.33
CHMP6-201ENST00000325167 SMARCC1Q92922 1105 aaPredicted RBP23.32■■□□□ 1.32
CHMP6-201ENST00000325167 LSG1Q9H089 658 aaKnown RBP23.32■■□□□ 1.32
CHMP6-201ENST00000325167 PTMSP20962 102 aa23.32■■□□□ 1.32
CHMP6-201ENST00000325167 CWC27Q6UX04 472 aaKnown RBP23.32■■□□□ 1.32
CHMP6-201ENST00000325167 SNRKQ9NRH2 765 aa23.32■■□□□ 1.32
CHMP6-201ENST00000325167 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
CHMP6-201ENST00000325167 EYA2O00167 538 aa23.31■■□□□ 1.32
CHMP6-201ENST00000325167 NEK4P51957 841 aa23.31■■□□□ 1.32
CHMP6-201ENST00000325167 CCDC57Q2TAC2 916 aa23.31■■□□□ 1.32
CHMP6-201ENST00000325167 SLC4A9Q96Q91 983 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms