RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CDC37L1Q7L3B6 337 aa15.34■□□□□ 0.05
HMGCS1-201ENST00000325110 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
HMGCS1-201ENST00000325110 XAGE3Q8WTP9 111 aa15.34■□□□□ 0.05
HMGCS1-201ENST00000325110 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
HMGCS1-201ENST00000325110 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
HMGCS1-201ENST00000325110 CCDC192P0DO97 292 aa15.33■□□□□ 0.05
HMGCS1-201ENST00000325110 UBE3BQ7Z3V4 1068 aa15.33■□□□□ 0.05
HMGCS1-201ENST00000325110 NUP62CLQ9H1M0 184 aa15.33■□□□□ 0.05
HMGCS1-201ENST00000325110 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 ZNF500O60304 480 aaPredicted RBP15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 GIGYF1O75420 1035 aaPredicted RBP15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 TNMDQ9H2S6 317 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 SH2B1Q9NRF2 756 aaPredicted RBP15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 MTMR6Q9Y217 621 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 C3P01024 1663 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.04
HMGCS1-201ENST00000325110 PEAK1Q9H792 1746 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 LETM1O95202 739 aaPredicted RBP15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 LINS1Q8NG48 757 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 TTC14Q96N46 770 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 TRIM5Q9C035 493 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 RPAP1Q9BWH6 1393 aaPredicted RBP15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
HMGCS1-201ENST00000325110 ANKLE2Q86XL3 938 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 DACT1Q9NYF0 836 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 ADCY9O60503 1353 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 SLC27A2O14975 620 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 ALDH1L1O75891 902 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 PDCP20941 246 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 GUCY1B3Q02153 619 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 COL9A3Q14050 684 aaPredicted RBP15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 NOLC1Q14978 699 aaKnown RBP eCLIP15.31■□□□□ 0.042e-10■□□□□ 10.7
HMGCS1-201ENST00000325110 MAP3K11Q16584 847 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
HMGCS1-201ENST00000325110 HIP1O00291 1037 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 CHGBP05060 677 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 MCM5P33992 734 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 CCDC85AQ96PX6 553 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 TAF6LQ9Y6J9 622 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 GOLGA6L6A8MZA4 724 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 SASH1O94885 1247 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 LARP1Q6PKG0 1096 aaKnown RBP15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 LUZP1Q86V48 1076 aa15.3■□□□□ 0.04
HMGCS1-201ENST00000325110 JAK2O60674 1132 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 KDM4AO75164 1064 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 LIG1P18858 919 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 TTC6Q86TZ1 520 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 SEC62Q99442 399 aaKnown RBP15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 A0A0G2JS52 829 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 PRDM10Q9NQV6 1147 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 CCT2P78371 535 aaKnown RBP15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
HMGCS1-201ENST00000325110 A0A087WZG4 1122 aa15.28■□□□□ 0.04
HMGCS1-201ENST00000325110 GORABQ5T7V8 394 aa15.28■□□□□ 0.04
HMGCS1-201ENST00000325110 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
HMGCS1-201ENST00000325110 DDX17Q92841 729 aaKnown RBP15.28■□□□□ 0.04
HMGCS1-201ENST00000325110 BRF1Q92994 677 aa15.28■□□□□ 0.04
HMGCS1-201ENST00000325110 HOXB7P09629 217 aa15.27■□□□□ 0.04
HMGCS1-201ENST00000325110 TFCP2Q12800 502 aa15.27■□□□□ 0.04
HMGCS1-201ENST00000325110 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
HMGCS1-201ENST00000325110 ZRSR1Q15695 479 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-201ENST00000325110 CHST3Q7LGC8 479 aa15.27■□□□□ 0.04
HMGCS1-201ENST00000325110 PROSER2Q86WR7 435 aaPredicted RBP15.27■□□□□ 0.04
HMGCS1-201ENST00000325110 UVSSAQ2YD98 709 aa15.27■□□□□ 0.03
HMGCS1-201ENST00000325110 TATP17735 454 aaPredicted RBP15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 ANKRD1Q15327 319 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 ANO6Q4KMQ2 910 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 GOLGA6L19H0YKK7 550 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 EPHA10Q5JZY3 1008 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 GOLIM4O00461 696 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 RAB11FIP4Q86YS3 637 aa15.26■□□□□ 0.03
HMGCS1-201ENST00000325110 BECN2A8MW95 431 aa15.25■□□□□ 0.03
HMGCS1-201ENST00000325110 PTGS1P23219 599 aa15.25■□□□□ 0.03
HMGCS1-201ENST00000325110 TYRO3Q06418 890 aa15.25■□□□□ 0.03
HMGCS1-201ENST00000325110 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
HMGCS1-201ENST00000325110 Q6ZUG5 572 aa15.25■□□□□ 0.03
HMGCS1-201ENST00000325110 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
HMGCS1-201ENST00000325110 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms