RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 RBM8AQ9Y5S9 174 aaKnown RBP10.42□□□□□ -0.74
CLK1-201ENST00000321356 MED23Q9ULK4 1368 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
CLK1-201ENST00000321356 C5P01031 1676 aa10.41□□□□□ -0.74
CLK1-201ENST00000321356 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
CLK1-201ENST00000321356 FIBPO43427 364 aa10.41□□□□□ -0.74
CLK1-201ENST00000321356 PTMAP06454 111 aaKnown RBP10.41□□□□□ -0.74
CLK1-201ENST00000321356 ZKSCAN1P17029 563 aaPredicted RBP10.41□□□□□ -0.74
CLK1-201ENST00000321356 PSME1Q06323 249 aa10.41□□□□□ -0.74
CLK1-201ENST00000321356 ME3Q16798 604 aa10.41□□□□□ -0.74
CLK1-201ENST00000321356 SASS6Q6UVJ0 657 aa10.41□□□□□ -0.74
CLK1-201ENST00000321356 EAF2Q96CJ1 260 aaPredicted RBP10.41□□□□□ -0.74
CLK1-201ENST00000321356 ALDH8A1Q9H2A2 487 aaPredicted RBP10.41□□□□□ -0.74
CLK1-201ENST00000321356 DDX21Q9NR30 783 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLK1-201ENST00000321356 USP25Q9UHP3 1055 aa10.41□□□□□ -0.74
CLK1-201ENST00000321356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.41□□□□□ -0.74
CLK1-201ENST00000321356 PRAMEF22A3QJZ6 481 aa10.4□□□□□ -0.74
CLK1-201ENST00000321356 GCP02774 474 aa10.4□□□□□ -0.74
CLK1-201ENST00000321356 HCLS1P14317 486 aaPredicted RBP10.4□□□□□ -0.74
CLK1-201ENST00000321356 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
CLK1-201ENST00000321356 NMIQ13287 307 aaPredicted RBP10.4□□□□□ -0.74
CLK1-201ENST00000321356 PDIA6Q15084 440 aa10.4□□□□□ -0.74
CLK1-201ENST00000321356 FAM227BQ96M60 508 aa10.4□□□□□ -0.74
CLK1-201ENST00000321356 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
CLK1-201ENST00000321356 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
CLK1-201ENST00000321356 UQCRHLA0A096LP55 91 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 DYNC1I1O14576 645 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 SLC27A2O14975 620 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 KDM4AO75164 1064 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 ADCY5O95622 1261 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 UQCRHP07919 91 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 PIBF1Q8WXW3 757 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.75
CLK1-201ENST00000321356 ELP1O95163 1332 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 DDX58O95786 925 aaKnown RBP10.39□□□□□ -0.75
CLK1-201ENST00000321356 IGKV5-2P06315 115 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 PSMA5P28066 241 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 G3BP1Q13283 466 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLK1-201ENST00000321356 TSGA10IPQ3SY00 556 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 ANKRD24Q8TF21 1146 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 MST1RQ04912 1400 aa10.39□□□□□ -0.75
CLK1-201ENST00000321356 RGPD5Q99666 1765 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
CLK1-201ENST00000321356 GIMAP6Q6P9H5 292 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 MAP7D2Q96T17 732 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
CLK1-201ENST00000321356 ZBTB7CA1YPR0 619 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 VPS37CA5D8V6 355 aaPredicted RBP10.38□□□□□ -0.75
CLK1-201ENST00000321356 PDCP20941 246 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 RPS6KB1P23443 525 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 ANKRD1Q15327 319 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 ANKLE2Q86XL3 938 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 CCDC8Q9H0W5 538 aaPredicted RBP10.38□□□□□ -0.75
CLK1-201ENST00000321356 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
CLK1-201ENST00000321356 NEURL1BA8MQ27 555 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 KCNJ4P48050 445 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 USPL1Q5W0Q7 1092 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 LARP1BQ659C4 914 aaKnown RBP10.37□□□□□ -0.75
CLK1-201ENST00000321356 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
CLK1-201ENST00000321356 CDC37L1Q7L3B6 337 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 HMG20BQ9P0W2 317 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 ABCC6O95255 1503 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
CLK1-201ENST00000321356 COL15A1P39059 1388 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 RFX7Q2KHR2 1363 aa10.37□□□□□ -0.75
CLK1-201ENST00000321356 AP5Z1O43299 807 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 DTNBO60941 627 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 KRT85P78386 507 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 TOB2Q14106 344 aaPredicted RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 BLOC1S2Q6QNY1 142 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 FSD1Q9BTV5 496 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 KIF1AQ12756 1690 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 ALS2Q96Q42 1657 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 TAF5LO75529 589 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 RBM10P98175 930 aaKnown RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 GCKRQ14397 625 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLK1-201ENST00000321356 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 PRIMPOLQ96LW4 560 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 ZNF830Q96NB3 372 aaPredicted RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 BOLA2Q9H3K6 86 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 TTC12Q9H892 705 aaPredicted RBP10.36□□□□□ -0.75
CLK1-201ENST00000321356 COPRSQ9NQ92 184 aa10.36□□□□□ -0.75
CLK1-201ENST00000321356 ERBB3P21860 1342 aa10.35□□□□□ -0.75
CLK1-201ENST00000321356 CCDC192P0DO97 292 aa10.35□□□□□ -0.75
CLK1-201ENST00000321356 ATP5JP18859 108 aa10.35□□□□□ -0.75
CLK1-201ENST00000321356 AIMP1Q12904 312 aaKnown RBP10.35□□□□□ -0.75
CLK1-201ENST00000321356 EPHA10Q5JZY3 1008 aa10.35□□□□□ -0.75
CLK1-201ENST00000321356 LRP10Q7Z4F1 713 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms