RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 KCNQ4P56696 695 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 GCKRQ14397 625 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
GINS3-201ENST00000318129 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 TPM2P07951 284 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 BECN1Q14457 450 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
GINS3-201ENST00000318129 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
GINS3-201ENST00000318129 COL15A1P39059 1388 aa12.55□□□□□ -0.4
GINS3-201ENST00000318129 ESPNB1AK53 854 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 AK7Q96M32 723 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 SLKQ9H2G2 1235 aaPredicted RBP12.54□□□□□ -0.4
GINS3-201ENST00000318129 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 GNPATO15228 680 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 HMMRO75330 724 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 IGHDP01880 384 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 RGS3P49796 1198 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 LRRC4BQ9NT99 713 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
GINS3-201ENST00000318129 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 ADRA2BP18089 450 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
GINS3-201ENST00000318129 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
GINS3-201ENST00000318129 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
GINS3-201ENST00000318129 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 NBPF7P0C2Y1 421 aaPredicted RBP12.53□□□□□ -0.4
GINS3-201ENST00000318129 HLFQ16534 295 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
GINS3-201ENST00000318129 RGPD3A6NKT7 1758 aaPredicted RBP12.52□□□□□ -0.4
GINS3-201ENST00000318129 RGPD4Q7Z3J3 1758 aa12.52□□□□□ -0.4
GINS3-201ENST00000318129 MRE11P49959 708 aa12.52□□□□□ -0.41
GINS3-201ENST00000318129 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
GINS3-201ENST00000318129 PROM2Q8N271 834 aa12.52□□□□□ -0.41
GINS3-201ENST00000318129 TNS1Q9HBL0 1735 aaKnown RBP12.52□□□□□ -0.41
GINS3-201ENST00000318129 H7C1W4 665 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
GINS3-201ENST00000318129 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 NUP98P52948 1817 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 ZPR1O75312 459 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 SIRT2Q8IXJ6 389 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 GCC1Q96CN9 775 aa12.51□□□□□ -0.41
GINS3-201ENST00000318129 ANKRD36CQ5JPF3 1778 aa12.5□□□□□ -0.41
GINS3-201ENST00000318129 PARP10Q53GL7 1025 aa12.5□□□□□ -0.41
GINS3-201ENST00000318129 SSFA2P28290 1259 aa12.5□□□□□ -0.41
GINS3-201ENST00000318129 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
GINS3-201ENST00000318129 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
GINS3-201ENST00000318129 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
GINS3-201ENST00000318129 MCM4P33991 863 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 RFC4P35249 363 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 MTX1Q13505 466 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
GINS3-201ENST00000318129 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 SEC24BO95487 1268 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 BAG6P46379 1132 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 CASP7P55210 303 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
GINS3-201ENST00000318129 SUCLG2Q96I99 432 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
GINS3-201ENST00000318129 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
GINS3-201ENST00000318129 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
GINS3-201ENST00000318129 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
GINS3-201ENST00000318129 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
GINS3-201ENST00000318129 GPTP24298 496 aa12.48□□□□□ -0.41
GINS3-201ENST00000318129 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
GINS3-201ENST00000318129 SSH3Q8TE77 659 aa12.48□□□□□ -0.41
GINS3-201ENST00000318129 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
GINS3-201ENST00000318129 UBR3Q6ZT12 1888 aa12.47□□□□□ -0.41
GINS3-201ENST00000318129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
GINS3-201ENST00000318129 POLA2Q14181 598 aa12.47□□□□□ -0.41
GINS3-201ENST00000318129 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
GINS3-201ENST00000318129 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
GINS3-201ENST00000318129 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
GINS3-201ENST00000318129 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
GINS3-201ENST00000318129 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
GINS3-201ENST00000318129 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
GINS3-201ENST00000318129 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
GINS3-201ENST00000318129 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.41
GINS3-201ENST00000318129 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.41
GINS3-201ENST00000318129 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.41
GINS3-201ENST00000318129 USP42Q9H9J4 1324 aaKnown RBP12.46□□□□□ -0.41
GINS3-201ENST00000318129 SCN7AQ01118 1682 aa12.46□□□□□ -0.41
GINS3-201ENST00000318129 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.42
GINS3-201ENST00000318129 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.42
GINS3-201ENST00000318129 PHF14O94880 888 aa12.46□□□□□ -0.42
GINS3-201ENST00000318129 EN1Q05925 392 aaPredicted RBP12.46□□□□□ -0.42
GINS3-201ENST00000318129 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.42
GINS3-201ENST00000318129 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.42
GINS3-201ENST00000318129 TRAK2O60296 914 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 BCL2L12Q9HB09 334 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms