RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 LDHDQ86WU2 507 aa26.31■■□□□ 1.8
SERF1A-201ENST00000317633 TAF1DQ9H5J8 278 aaPredicted RBP26.31■■□□□ 1.8
SERF1A-201ENST00000317633 FZD9O00144 591 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 NTSR2O95665 410 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 POTEIP0CG38 1075 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 POTEJP0CG39 1038 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 PDIA6Q15084 440 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 CRAMP1Q96RY5 1269 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 HACL1Q9UJ83 578 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 ZNF541Q9H0D2 1346 aa26.3■■□□□ 1.8
SERF1A-201ENST00000317633 LRP10Q7Z4F1 713 aa26.29■■□□□ 1.8
SERF1A-201ENST00000317633 NLRP3Q96P20 1036 aa26.29■■□□□ 1.8
SERF1A-201ENST00000317633 CREBZFQ9NS37 354 aa26.29■■□□□ 1.8
SERF1A-201ENST00000317633 WDR43Q15061 677 aaKnown RBP eCLIP26.28■■□□□ 1.8
SERF1A-201ENST00000317633 NEUROD2Q15784 382 aa26.28■■□□□ 1.8
SERF1A-201ENST00000317633 HSP90AB3PQ58FF7 597 aa26.28■■□□□ 1.8
SERF1A-201ENST00000317633 UTP14AQ9BVJ6 771 aaKnown RBP26.28■■□□□ 1.8
SERF1A-201ENST00000317633 TMX4Q9H1E5 349 aaPredicted RBP26.28■■□□□ 1.8
SERF1A-201ENST00000317633 SNED1Q8TER0 1413 aa26.28■■□□□ 1.8
SERF1A-201ENST00000317633 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
SERF1A-201ENST00000317633 GPC2Q8N158 579 aa26.27■■□□□ 1.8
SERF1A-201ENST00000317633 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
SERF1A-201ENST00000317633 RNF123Q5XPI4 1314 aa26.27■■□□□ 1.8
SERF1A-201ENST00000317633 ANKRD36CQ5JPF3 1778 aa26.27■■□□□ 1.8
SERF1A-201ENST00000317633 PPEF1O14829 653 aaPredicted RBP26.26■■□□□ 1.79
SERF1A-201ENST00000317633 EAPPQ56P03 285 aaPredicted RBP26.26■■□□□ 1.79
SERF1A-201ENST00000317633 PNMA8AQ86V59 439 aaPredicted RBP26.26■■□□□ 1.79
SERF1A-201ENST00000317633 ANXA1P04083 346 aa26.25■■□□□ 1.79
SERF1A-201ENST00000317633 EPHX2P34913 555 aa26.25■■□□□ 1.79
SERF1A-201ENST00000317633 EIF6P56537 245 aaKnown RBP26.25■■□□□ 1.79
SERF1A-201ENST00000317633 PROSER3Q2NL68 480 aa26.25■■□□□ 1.79
SERF1A-201ENST00000317633 SLC10A5Q5PT55 438 aa26.25■■□□□ 1.79
SERF1A-201ENST00000317633 CHL1O00533 1208 aa26.24■■□□□ 1.79
SERF1A-201ENST00000317633 COPS6Q7L5N1 327 aa26.24■■□□□ 1.79
SERF1A-201ENST00000317633 CLEC11AQ9Y240 323 aa26.24■■□□□ 1.79
SERF1A-201ENST00000317633 AIMP1Q12904 312 aaKnown RBP26.23■■□□□ 1.79
SERF1A-201ENST00000317633 NECTIN2Q92692 538 aa26.23■■□□□ 1.79
SERF1A-201ENST00000317633 PASKQ96RG2 1323 aa26.22■■□□□ 1.79
SERF1A-201ENST00000317633 TCERG1O14776 1098 aaKnown RBP26.22■■□□□ 1.79
SERF1A-201ENST00000317633 LARGE2Q8N3Y3 721 aa26.22■■□□□ 1.79
SERF1A-201ENST00000317633 XAGE3Q8WTP9 111 aa26.22■■□□□ 1.79
SERF1A-201ENST00000317633 DDX21Q9NR30 783 aaKnown RBP eCLIP26.22■■□□□ 1.79
SERF1A-201ENST00000317633 LAS1LQ9Y4W2 734 aaKnown RBP26.22■■□□□ 1.79
SERF1A-201ENST00000317633 C3orf67Q6ZVT6 689 aa26.21■■□□□ 1.79
SERF1A-201ENST00000317633 HSPA1AP0DMV8 641 aaKnown RBP26.2■■□□□ 1.78
SERF1A-201ENST00000317633 HSPA1BP0DMV9 641 aaKnown RBP26.2■■□□□ 1.78
SERF1A-201ENST00000317633 COL13A1Q5TAT6 717 aaPredicted RBP26.2■■□□□ 1.78
SERF1A-201ENST00000317633 TRIM35Q9UPQ4 493 aa26.2■■□□□ 1.78
SERF1A-201ENST00000317633 LMOD1P29536 600 aaPredicted RBP26.19■■□□□ 1.78
SERF1A-201ENST00000317633 TCIRG1Q13488 830 aa26.19■■□□□ 1.78
SERF1A-201ENST00000317633 NLRP10Q86W26 655 aa26.19■■□□□ 1.78
SERF1A-201ENST00000317633 VPS33BQ9H267 617 aa26.19■■□□□ 1.78
SERF1A-201ENST00000317633 MKRN1Q9UHC7 482 aaKnown RBP26.19■■□□□ 1.78
SERF1A-201ENST00000317633 ATP6V0A2Q9Y487 856 aa26.19■■□□□ 1.78
SERF1A-201ENST00000317633 GJA3Q9Y6H8 435 aa26.19■■□□□ 1.78
SERF1A-201ENST00000317633 ADAMTSL1Q8N6G6 1762 aa26.19■■□□□ 1.78
SERF1A-201ENST00000317633 LAMB2P55268 1798 aa26.18■■□□□ 1.78
SERF1A-201ENST00000317633 ITGBL1O95965 494 aaPredicted RBP26.18■■□□□ 1.78
SERF1A-201ENST00000317633 HOXB7P09629 217 aa26.18■■□□□ 1.78
SERF1A-201ENST00000317633 NIM1KQ8IY84 436 aa26.18■■□□□ 1.78
SERF1A-201ENST00000317633 TRMT112Q9UI30 125 aaKnown RBP26.18■■□□□ 1.78
SERF1A-201ENST00000317633 ADAMTS8Q9UP79 889 aa26.18■■□□□ 1.78
SERF1A-201ENST00000317633 TMEM88BA6NKF7 163 aa26.17■■□□□ 1.78
SERF1A-201ENST00000317633 BBOX1O75936 387 aa26.17■■□□□ 1.78
SERF1A-201ENST00000317633 HDGFL1Q5TGJ6 251 aa26.17■■□□□ 1.78
SERF1A-201ENST00000317633 SUPT20HQ8NEM7 779 aa26.17■■□□□ 1.78
SERF1A-201ENST00000317633 ABCC4O15439 1325 aa26.16■■□□□ 1.78
SERF1A-201ENST00000317633 SH3TC1Q8TE82 1336 aa26.16■■□□□ 1.78
SERF1A-201ENST00000317633 KRT24Q2M2I5 525 aa26.16■■□□□ 1.78
SERF1A-201ENST00000317633 CHPF2Q9P2E5 772 aa26.16■■□□□ 1.78
SERF1A-201ENST00000317633 PCNTO95613 3336 aa26.16■■□□□ 1.78
SERF1A-201ENST00000317633 COL4A5P29400 1685 aa26.15■■□□□ 1.78
SERF1A-201ENST00000317633 PPIP5K2O43314 1243 aa26.15■■□□□ 1.78
SERF1A-201ENST00000317633 DDX46Q7L014 1031 aaKnown RBP26.15■■□□□ 1.78
SERF1A-201ENST00000317633 CNTROBQ8N137 903 aa26.15■■□□□ 1.78
SERF1A-201ENST00000317633 CFAP44Q96MT7 982 aa26.15■■□□□ 1.78
SERF1A-201ENST00000317633 DBF4Q9UBU7 674 aaPredicted RBP26.15■■□□□ 1.78
SERF1A-201ENST00000317633 CNTNAP1P78357 1384 aa26.15■■□□□ 1.78
SERF1A-201ENST00000317633 HCLS1P14317 486 aaPredicted RBP26.14■■□□□ 1.78
SERF1A-201ENST00000317633 SP8Q8IXZ3 490 aa26.14■■□□□ 1.78
SERF1A-201ENST00000317633 MAP1SQ66K74 1059 aaPredicted RBP26.13■■□□□ 1.77
SERF1A-201ENST00000317633 PLBD2Q8NHP8 589 aa26.13■■□□□ 1.77
SERF1A-201ENST00000317633 DPP8Q6V1X1 898 aaPredicted RBP26.12■■□□□ 1.77
SERF1A-201ENST00000317633 ANKRD13DQ6ZTN6 518 aa26.12■■□□□ 1.77
SERF1A-201ENST00000317633 TNS4Q8IZW8 715 aa26.12■■□□□ 1.77
SERF1A-201ENST00000317633 PRKRIP1Q9H875 184 aaPredicted RBP26.12■■□□□ 1.77
SERF1A-201ENST00000317633 SCNN1DP51172 638 aa26.11■■□□□ 1.77
SERF1A-201ENST00000317633 AOC3Q16853 763 aa26.11■■□□□ 1.77
SERF1A-201ENST00000317633 SLC51AQ86UW1 340 aa26.11■■□□□ 1.77
SERF1A-201ENST00000317633 MPNDQ8N594 471 aa26.11■■□□□ 1.77
SERF1A-201ENST00000317633 RTFDC1Q9BY42 306 aaPredicted RBP26.11■■□□□ 1.77
SERF1A-201ENST00000317633 HYPKQ9NX55 129 aa26.11■■□□□ 1.77
SERF1A-201ENST00000317633 GRAPQ13588 217 aa26.1■■□□□ 1.77
SERF1A-201ENST00000317633 USP50Q70EL3 339 aaPredicted RBP26.1■■□□□ 1.77
SERF1A-201ENST00000317633 TMC4Q7Z404 712 aa26.1■■□□□ 1.77
SERF1A-201ENST00000317633 GRAPLQ8TC17 118 aaPredicted RBP26.1■■□□□ 1.77
SERF1A-201ENST00000317633 ZNRF3Q9ULT6 936 aa26.1■■□□□ 1.77
SERF1A-201ENST00000317633 LTBP1Q14766 1721 aa26.09■■□□□ 1.77
SERF1A-201ENST00000317633 DUSP27Q5VZP5 1158 aa26.09■■□□□ 1.77
SERF1A-201ENST00000317633 EPS15P42566 896 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms