RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 DDB1Q16531 1140 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 QTRT2Q9H974 415 aaKnown RBP13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 CYP27B1O15528 508 aa13.9□□□□□ -0.19
LDLRAD3-201ENST00000315571 HOMEZQ8IX15 550 aa13.9□□□□□ -0.19
LDLRAD3-201ENST00000315571 NEK11Q8NG66 645 aa13.9□□□□□ -0.19
LDLRAD3-201ENST00000315571 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.19
LDLRAD3-201ENST00000315571 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.19
LDLRAD3-201ENST00000315571 TMEM63CQ9P1W3 806 aa13.9□□□□□ -0.19
LDLRAD3-201ENST00000315571 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
LDLRAD3-201ENST00000315571 ZNF772Q68DY9 489 aaPredicted RBP13.89□□□□□ -0.19
LDLRAD3-201ENST00000315571 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
LDLRAD3-201ENST00000315571 DISP2A7MBM2 1401 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 PARP4Q9UKK3 1724 aaKnown RBP13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 ST18O60284 1047 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 FKBP5Q13451 457 aaPredicted RBP13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 LMBRD1Q9NUN5 540 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 GOLIM4O00461 696 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 GYS2P54840 703 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 TTLL5Q6EMB2 1281 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 TSR2Q969E8 191 aaKnown RBP13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 SNX21Q969T3 373 aa13.88□□□□□ -0.19
LDLRAD3-201ENST00000315571 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 SART3Q15020 963 aaKnown RBP13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 E2F4Q16254 413 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 ICE2Q659A1 982 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 DDX41Q9UJV9 622 aaKnown RBP13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 ANKRD45Q5TZF3 282 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 ST7Q9NRC1 585 aa13.87□□□□□ -0.19
LDLRAD3-201ENST00000315571 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-201ENST00000315571 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
LDLRAD3-201ENST00000315571 LRRFIP2Q9Y608 721 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-201ENST00000315571 ATRNO75882 1429 aa13.86□□□□□ -0.19
LDLRAD3-201ENST00000315571 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-201ENST00000315571 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 TPM4P67936 248 aa13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 ZNF397Q8NF99 534 aaPredicted RBP13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 TNS2Q63HR2 1409 aa13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 MIS18AQ9NYP9 233 aa13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
LDLRAD3-201ENST00000315571 TRIM66O15016 1216 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 CABP4P57796 275 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 TTC31Q49AM3 519 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 GORABQ5T7V8 394 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 FAM184AQ8NB25 1140 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 KIF18AQ8NI77 898 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 MBIPQ9NS73 344 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 TPM3P06753 285 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 SYT10Q6XYQ8 523 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 CEMIPQ8WUJ3 1361 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 CASQ1P31415 396 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 PKP1Q13835 747 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 TMED8Q6PL24 325 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 PKD1L3Q7Z443 1732 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 GPT2Q8TD30 523 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 YY1AP1Q9H869 796 aa13.84□□□□□ -0.19
LDLRAD3-201ENST00000315571 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.19
LDLRAD3-201ENST00000315571 TXLNBQ8N3L3 684 aa13.83□□□□□ -0.19
LDLRAD3-201ENST00000315571 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 LEKR1Q6ZMV7 388 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 IBTKQ9P2D0 1353 aaPredicted RBP13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 BTBD11A6QL63 1104 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 CHL1O00533 1208 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 JRKLQ9Y4A0 524 aa13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 KDM6AO15550 1401 aaPredicted RBP13.83□□□□□ -0.2
LDLRAD3-201ENST00000315571 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 AK7Q96M32 723 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 LMAN1P49257 510 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 NKX1-1Q15270 411 aaPredicted RBP13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 ARGLU1Q9NWB6 273 aaPredicted RBP13.82□□□□□ -0.2
LDLRAD3-201ENST00000315571 MYO1CO00159 1063 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 CALRP27797 417 aaKnown RBP13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 RBM6P78332 1123 aaKnown RBP13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 TRIM5Q9C035 493 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 SMTNL1A8MU46 457 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 APBB1O00213 710 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 CCDC172P0C7W6 258 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 A0A1B0GUL7 405 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms