RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
CDC42-201ENST00000315554 CAMTA2O94983 1202 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 HOXB7P09629 217 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 XAGE3Q8WTP9 111 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 PODXL2Q9NZ53 605 aa10.14□□□□□ -0.79
CDC42-201ENST00000315554 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
CDC42-201ENST00000315554 ERBB4Q15303 1308 aa10.13□□□□□ -0.79
CDC42-201ENST00000315554 MMP10P09238 476 aa10.13□□□□□ -0.79
CDC42-201ENST00000315554 POLD1P28340 1107 aa10.13□□□□□ -0.79
CDC42-201ENST00000315554 LRP10Q7Z4F1 713 aa10.13□□□□□ -0.79
CDC42-201ENST00000315554 PHAXQ9H814 394 aaKnown RBP10.13□□□□□ -0.79
CDC42-201ENST00000315554 DDX21Q9NR30 783 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDC42-201ENST00000315554 VAMP4O75379 141 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 DDR1Q08345 913 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 HLFQ16534 295 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 NLGN1Q8N2Q7 840 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
CDC42-201ENST00000315554 DBF4Q9UBU7 674 aaPredicted RBP10.12□□□□□ -0.79
CDC42-201ENST00000315554 FAM177BA6PVY3 158 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 NFIXQ14938 502 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 CCDC30Q5VVM6 783 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 KIF6Q6ZMV9 814 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 LRP5O75197 1615 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 SCN7AQ01118 1682 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 ZBED9Q6R2W3 1325 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 MAP3K15Q6ZN16 1313 aa10.11□□□□□ -0.79
CDC42-201ENST00000315554 G2E3Q7L622 706 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 TRMT2AQ8IZ69 625 aaKnown RBP10.1□□□□□ -0.79
CDC42-201ENST00000315554 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 STK31Q9BXU1 1019 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
CDC42-201ENST00000315554 GPTP24298 496 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 TM4SF1P30408 202 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 EMP3P54852 163 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
CDC42-201ENST00000315554 HYPKQ9NX55 129 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 PARP3Q9Y6F1 533 aa10.1□□□□□ -0.79
CDC42-201ENST00000315554 BCORQ6W2J9 1755 aa10.09□□□□□ -0.79
CDC42-201ENST00000315554 NUBP1P53384 320 aa10.09□□□□□ -0.79
CDC42-201ENST00000315554 NIP7Q9Y221 180 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDC42-201ENST00000315554 COL24A1Q17RW2 1714 aa10.08□□□□□ -0.8
CDC42-201ENST00000315554 SERPINB2P05120 415 aa10.08□□□□□ -0.8
CDC42-201ENST00000315554 NLGN2Q8NFZ4 835 aa10.08□□□□□ -0.8
CDC42-201ENST00000315554 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
CDC42-201ENST00000315554 ZNF652Q9Y2D9 606 aa10.08□□□□□ -0.8
CDC42-201ENST00000315554 ERVV-1B6SEH8 477 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 ATP5J2-PTCD1G3V325 749 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
CDC42-201ENST00000315554 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 RIC3Q7Z5B4 369 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 PLBD2Q8NHP8 589 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 SETDB2Q96T68 719 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 CARMIL3Q8ND23 1372 aa10.07□□□□□ -0.8
CDC42-201ENST00000315554 UBN2Q6ZU65 1347 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 NPHP1O15259 732 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 FLIIQ13045 1269 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 CLEC4GQ6UXB4 293 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
CDC42-201ENST00000315554 SSH1Q8WYL5 1049 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 HS3ST6Q96QI5 342 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 SYT17Q9BSW7 474 aa10.06□□□□□ -0.8
CDC42-201ENST00000315554 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 PI4KAP2A4QPH2 592 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 FKBP5Q13451 457 aaPredicted RBP10.05□□□□□ -0.8
CDC42-201ENST00000315554 SUSD4Q5VX71 490 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 ZNF34Q8IZ26 560 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
CDC42-201ENST00000315554 PI4KAP1Q8N8J0 262 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 MYD88Q99836 296 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 SMC4Q9NTJ3 1288 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
CDC42-201ENST00000315554 MAP3K2Q9Y2U5 619 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 ADCY9O60503 1353 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 NUP98P52948 1817 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 SRCAPQ6ZRS2 3230 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 C10orf71Q711Q0 1435 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 ATP10DQ9P241 1426 aa10.05□□□□□ -0.8
CDC42-201ENST00000315554 F6X3S4 739 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 DDX58O95786 925 aaKnown RBP10.04□□□□□ -0.8
CDC42-201ENST00000315554 TCIRG1Q13488 830 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 CNBD1Q8NA66 436 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 AFDNP55196 1824 aaKnown RBP10.04□□□□□ -0.8
CDC42-201ENST00000315554 A0A0G2JLW4 131 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
CDC42-201ENST00000315554 CHRNA5P30532 468 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 ERFEQ4G0M1 354 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
CDC42-201ENST00000315554 KSR2Q6VAB6 950 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 SYNE4Q8N205 404 aa10.04□□□□□ -0.8
CDC42-201ENST00000315554 JARID2Q92833 1246 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms