RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 VPS53Q5VIR6 699 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 SNRKQ9NRH2 765 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 USP16Q9Y5T5 823 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 CCDC171Q6TFL3 1326 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 SYCE3A1L190 88 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 ADCK5Q3MIX3 580 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 ANKRD13DQ6ZTN6 518 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 LARP6Q9BRS8 491 aaKnown RBP27.33■■□□□ 1.97
SIAH2-201ENST00000312960 SIL1Q9H173 461 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 TLR7Q9NYK1 1049 aaKnown RBP27.33■■□□□ 1.97
SIAH2-201ENST00000312960 CYP27B1O15528 508 aa27.32■■□□□ 1.96
SIAH2-201ENST00000312960 CSB-PGBD3P0DP91 1061 aa27.32■■□□□ 1.96
SIAH2-201ENST00000312960 SLAIN2Q9P270 581 aa27.32■■□□□ 1.96
SIAH2-201ENST00000312960 MRC1P22897 1456 aa27.32■■□□□ 1.96
SIAH2-201ENST00000312960 JAKMIP1Q96N16 626 aaKnown RBP27.32■■□□□ 1.96
SIAH2-201ENST00000312960 KLHDC4Q8TBB5 520 aa27.31■■□□□ 1.96
SIAH2-201ENST00000312960 CABLES1Q8TDN4 633 aa27.31■■□□□ 1.96
SIAH2-201ENST00000312960 MAP4K1Q92918 833 aa27.31■■□□□ 1.96
SIAH2-201ENST00000312960 FAM227BQ96M60 508 aa27.31■■□□□ 1.96
SIAH2-201ENST00000312960 PDRG1Q9NUG6 133 aa27.31■■□□□ 1.96
SIAH2-201ENST00000312960 NMIQ13287 307 aaPredicted RBP27.3■■□□□ 1.96
SIAH2-201ENST00000312960 USP48Q86UV5 1035 aa27.3■■□□□ 1.96
SIAH2-201ENST00000312960 TTC5Q8N0Z6 440 aa27.3■■□□□ 1.96
SIAH2-201ENST00000312960 ZSCAN22P10073 491 aaPredicted RBP27.3■■□□□ 1.96
SIAH2-201ENST00000312960 SPATA31A3Q5VYP0 1347 aa27.3■■□□□ 1.96
SIAH2-201ENST00000312960 CYP46A1Q9Y6A2 500 aa27.3■■□□□ 1.96
SIAH2-201ENST00000312960 FOXD4L6Q3SYB3 417 aaPredicted RBP27.29■■□□□ 1.96
SIAH2-201ENST00000312960 FOXD4L3Q6VB84 417 aaPredicted RBP27.29■■□□□ 1.96
SIAH2-201ENST00000312960 TMEM87AQ8NBN3 555 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 RBM8AQ9Y5S9 174 aaKnown RBP27.29■■□□□ 1.96
SIAH2-201ENST00000312960 LARGE1O95461 756 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 SYT1P21579 422 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 FMNL2Q96PY5 1086 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 BOLA2Q9H3K6 86 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 COPRSQ9NQ92 184 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 SMC3Q9UQE7 1217 aa27.29■■□□□ 1.96
SIAH2-201ENST00000312960 STX6O43752 255 aa27.28■■□□□ 1.96
SIAH2-201ENST00000312960 GADD45BO75293 160 aaPredicted RBP27.28■■□□□ 1.96
SIAH2-201ENST00000312960 CHRNA2Q15822 529 aa27.28■■□□□ 1.96
SIAH2-201ENST00000312960 ZSCAN31Q96LW9 406 aaPredicted RBP27.28■■□□□ 1.96
SIAH2-201ENST00000312960 GDPD2Q9HCC8 539 aa27.28■■□□□ 1.96
SIAH2-201ENST00000312960 TNS3Q68CZ2 1445 aa27.28■■□□□ 1.96
SIAH2-201ENST00000312960 ZKSCAN1P17029 563 aaPredicted RBP27.28■■□□□ 1.96
SIAH2-201ENST00000312960 CREB3L3Q68CJ9 461 aa27.28■■□□□ 1.96
SIAH2-201ENST00000312960 PDLIM2Q96JY6 352 aa27.28■■□□□ 1.96
SIAH2-201ENST00000312960 SH2B1Q9NRF2 756 aaPredicted RBP27.27■■□□□ 1.96
SIAH2-201ENST00000312960 RFX5P48382 616 aaPredicted RBP27.26■■□□□ 1.95
SIAH2-201ENST00000312960 SYAP1Q96A49 352 aaPredicted RBP27.26■■□□□ 1.95
SIAH2-201ENST00000312960 COL15A1P39059 1388 aa27.26■■□□□ 1.95
SIAH2-201ENST00000312960 PIP4K2AP48426 406 aaPredicted RBP27.25■■□□□ 1.95
SIAH2-201ENST00000312960 PKD1L3Q7Z443 1732 aa27.25■■□□□ 1.95
SIAH2-201ENST00000312960 A0A0D9SFI3 127 aa27.25■■□□□ 1.95
SIAH2-201ENST00000312960 RABL6Q3YEC7 729 aaPredicted RBP27.25■■□□□ 1.95
SIAH2-201ENST00000312960 FSD1Q9BTV5 496 aa27.25■■□□□ 1.95
SIAH2-201ENST00000312960 TCHHQ07283 1943 aa27.24■■□□□ 1.95
SIAH2-201ENST00000312960 PTPN12Q05209 780 aaKnown RBP27.24■■□□□ 1.95
SIAH2-201ENST00000312960 CCDC83Q8IWF9 413 aa27.24■■□□□ 1.95
SIAH2-201ENST00000312960 SLC27A2O14975 620 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 HS1BP3Q53T59 392 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 ZSCAN30Q86W11 494 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 MED23Q9ULK4 1368 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 F13A1P00488 732 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 KCNJ4P48050 445 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 CABP4P57796 275 aa27.23■■□□□ 1.95
SIAH2-201ENST00000312960 JARID2Q92833 1246 aaPredicted RBP27.23■■□□□ 1.95
SIAH2-201ENST00000312960 CPDO75976 1380 aa27.22■■□□□ 1.95
SIAH2-201ENST00000312960 CNPY2Q9Y2B0 182 aa27.22■■□□□ 1.95
SIAH2-201ENST00000312960 GJB2P29033 226 aa27.22■■□□□ 1.95
SIAH2-201ENST00000312960 ST3GAL1Q11201 340 aa27.21■■□□□ 1.95
SIAH2-201ENST00000312960 ME3Q16798 604 aa27.21■■□□□ 1.95
SIAH2-201ENST00000312960 UBE3BQ7Z3V4 1068 aa27.21■■□□□ 1.95
SIAH2-201ENST00000312960 ATP5JP18859 108 aa27.21■■□□□ 1.95
SIAH2-201ENST00000312960 PSMA5P28066 241 aa27.21■■□□□ 1.95
SIAH2-201ENST00000312960 SOS2Q07890 1332 aaPredicted RBP27.21■■□□□ 1.95
SIAH2-201ENST00000312960 TNNI3KQ59H18 835 aa27.2■■□□□ 1.95
SIAH2-201ENST00000312960 DDX54Q8TDD1 881 aaKnown RBP27.2■■□□□ 1.95
SIAH2-201ENST00000312960 DBNLQ9UJU6 430 aaKnown RBP27.2■■□□□ 1.95
SIAH2-201ENST00000312960 ATP6V1DQ9Y5K8 247 aa27.2■■□□□ 1.95
SIAH2-201ENST00000312960 FPGT-TNNI3KV9GXZ4 949 aa27.2■■□□□ 1.95
SIAH2-201ENST00000312960 JCADQ9P266 1359 aa27.2■■□□□ 1.94
SIAH2-201ENST00000312960 PLBD2Q8NHP8 589 aa27.2■■□□□ 1.94
SIAH2-201ENST00000312960 TSPY26PQ9H489 355 aa27.2■■□□□ 1.94
SIAH2-201ENST00000312960 PHF14O94880 888 aa27.19■■□□□ 1.94
SIAH2-201ENST00000312960 CASP7P55210 303 aa27.19■■□□□ 1.94
SIAH2-201ENST00000312960 TFCP2Q12800 502 aa27.19■■□□□ 1.94
SIAH2-201ENST00000312960 ATP5J2-PTCD1G3V325 749 aa27.19■■□□□ 1.94
SIAH2-201ENST00000312960 PTCD1O75127 700 aaKnown RBP27.19■■□□□ 1.94
SIAH2-201ENST00000312960 RNF20Q5VTR2 975 aa27.19■■□□□ 1.94
SIAH2-201ENST00000312960 MTMR6Q9Y217 621 aa27.19■■□□□ 1.94
SIAH2-201ENST00000312960 A0A087WZG4 1122 aa27.18■■□□□ 1.94
SIAH2-201ENST00000312960 TPCN1Q9ULQ1 816 aa27.18■■□□□ 1.94
SIAH2-201ENST00000312960 GLI3P10071 1580 aa27.18■■□□□ 1.94
SIAH2-201ENST00000312960 ARFGEF2Q9Y6D5 1785 aa27.18■■□□□ 1.94
SIAH2-201ENST00000312960 AFDNP55196 1824 aaKnown RBP27.18■■□□□ 1.94
SIAH2-201ENST00000312960 ZNF589Q86UQ0 364 aaPredicted RBP27.17■■□□□ 1.94
SIAH2-201ENST00000312960 ALDH8A1Q9H2A2 487 aaPredicted RBP27.17■■□□□ 1.94
SIAH2-201ENST00000312960 COL9A3Q14050 684 aaPredicted RBP27.17■■□□□ 1.94
SIAH2-201ENST00000312960 TSGA10IPQ3SY00 556 aa27.17■■□□□ 1.94
SIAH2-201ENST00000312960 EDC3Q96F86 508 aaKnown RBP27.17■■□□□ 1.94
SIAH2-201ENST00000312960 UBE2HP62256 183 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms