RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 KIF18AQ8NI77 898 aa20.05■□□□□ 0.8
GABRB3-202ENST00000311550 STX1AQ16623 288 aa20.05■□□□□ 0.8
GABRB3-202ENST00000311550 CT47A1Q5JQC4 288 aaPredicted RBP20.05■□□□□ 0.8
GABRB3-202ENST00000311550 AXDND1Q5T1B0 1012 aaPredicted RBP20.05■□□□□ 0.8
GABRB3-202ENST00000311550 MICU3Q86XE3 530 aa20.05■□□□□ 0.8
GABRB3-202ENST00000311550 ANKRD18BA2A2Z9 1011 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 CEP131Q9UPN4 1083 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 ALDH1L1O75891 902 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 SSBP05455 408 aaKnown RBP eCLIP20.04■□□□□ 0.8
GABRB3-202ENST00000311550 TOP1P11387 765 aaKnown RBP20.04■□□□□ 0.8
GABRB3-202ENST00000311550 CNNM3Q8NE01 707 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 SOS1Q07889 1333 aaPredicted RBP20.04■□□□□ 0.8
GABRB3-202ENST00000311550 ARHGAP29Q52LW3 1261 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
GABRB3-202ENST00000311550 EPB41L2O43491 1005 aaKnown RBP20.03■□□□□ 0.8
GABRB3-202ENST00000311550 TMC6Q7Z403 805 aa20.03■□□□□ 0.8
GABRB3-202ENST00000311550 TTC12Q9H892 705 aaPredicted RBP20.03■□□□□ 0.8
GABRB3-202ENST00000311550 RANBP6O60518 1105 aaKnown RBP20.03■□□□□ 0.8
GABRB3-202ENST00000311550 URI1O94763 535 aaPredicted RBP20.03■□□□□ 0.8
GABRB3-202ENST00000311550 LMBR1LQ6UX01 489 aa20.03■□□□□ 0.8
GABRB3-202ENST00000311550 ANO6Q4KMQ2 910 aa20.03■□□□□ 0.8
GABRB3-202ENST00000311550 TMX1Q9H3N1 280 aa20.02■□□□□ 0.8
GABRB3-202ENST00000311550 Q6ZUG5 572 aa20.02■□□□□ 0.8
GABRB3-202ENST00000311550 PDCL3Q9H2J4 239 aa20.02■□□□□ 0.8
GABRB3-202ENST00000311550 CWC15Q9P013 229 aaKnown RBP20.02■□□□□ 0.79
GABRB3-202ENST00000311550 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
GABRB3-202ENST00000311550 SSRP1Q08945 709 aaKnown RBP20.01■□□□□ 0.79
GABRB3-202ENST00000311550 MAP3K5Q99683 1374 aa20.01■□□□□ 0.79
GABRB3-202ENST00000311550 ERICH4A6NGS2 130 aa20.01■□□□□ 0.79
GABRB3-202ENST00000311550 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
GABRB3-202ENST00000311550 KDM5CP41229 1560 aa20.01■□□□□ 0.79
GABRB3-202ENST00000311550 EIF5P55010 431 aaKnown RBP20.01■□□□□ 0.79
GABRB3-202ENST00000311550 CPLX3Q8WVH0 158 aa20.01■□□□□ 0.79
GABRB3-202ENST00000311550 CCDC196A0A1B0GTZ2 297 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 SLC5A1P13866 664 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
GABRB3-202ENST00000311550 ZKSCAN5Q9Y2L8 839 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 KLF18A0A0U1RQI7 1052 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 KIF2AO00139 706 aaPredicted RBP20■□□□□ 0.79
GABRB3-202ENST00000311550 NOM1Q5C9Z4 860 aaKnown RBP20■□□□□ 0.79
GABRB3-202ENST00000311550 LEKR1Q6ZMV7 388 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 TMEM67Q5HYA8 995 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 LINS1Q8NG48 757 aa20■□□□□ 0.79
GABRB3-202ENST00000311550 ZSCAN16Q9H4T2 348 aaPredicted RBP20■□□□□ 0.79
GABRB3-202ENST00000311550 ERLIN1O75477 346 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 NCOA7Q8NI08 942 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 DTNBO60941 627 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 NOLC1Q14978 699 aaKnown RBP eCLIP19.99■□□□□ 0.79
GABRB3-202ENST00000311550 CREB3L3Q68CJ9 461 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 TTC41PQ6P2S7 1318 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 METAP2P50579 478 aaKnown RBP eCLIP19.99■□□□□ 0.79
GABRB3-202ENST00000311550 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 CCDC181Q5TID7 509 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 CCDC186Q7Z3E2 898 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 RRAGDQ9NQL2 400 aaPredicted RBP19.99■□□□□ 0.79
GABRB3-202ENST00000311550 HOXC9P31274 260 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 CAVIN4Q5BKX8 364 aa19.99■□□□□ 0.79
GABRB3-202ENST00000311550 FAM200AQ8TCP9 573 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 DNAJC25Q9H1X3 360 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 CEP170Q5SW79 1584 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 CHL1O00533 1208 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 ZSCAN12O43309 604 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 USP5P45974 858 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 CDR1P51861 262 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 CHST3Q7LGC8 479 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 TMCO3Q6UWJ1 677 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 NFATC2IPQ8NCF5 419 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 FAM193AP78312 1265 aa19.98■□□□□ 0.79
GABRB3-202ENST00000311550 HSP90AB3PQ58FF7 597 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 INTS4Q96HW7 963 aaKnown RBP19.97■□□□□ 0.79
GABRB3-202ENST00000311550 ZFYVE27Q5T4F4 411 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 CTCFLQ8NI51 663 aaPredicted RBP19.97■□□□□ 0.79
GABRB3-202ENST00000311550 SLC26A6Q9BXS9 759 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 SYT1P21579 422 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 RBSNQ9H1K0 784 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 KIAA1328Q86T90 577 aa19.97■□□□□ 0.79
GABRB3-202ENST00000311550 MBD5Q9P267 1494 aa19.96■□□□□ 0.79
GABRB3-202ENST00000311550 PPP4R3BQ5MIZ7 849 aa19.96■□□□□ 0.79
GABRB3-202ENST00000311550 IQCA1Q86XH1 822 aa19.96■□□□□ 0.79
GABRB3-202ENST00000311550 NEMFO60524 1076 aa19.96■□□□□ 0.79
GABRB3-202ENST00000311550 SPDYE4A6NLX3 237 aa19.95■□□□□ 0.78
GABRB3-202ENST00000311550 DYNC1I1O14576 645 aa19.95■□□□□ 0.78
GABRB3-202ENST00000311550 BICC1Q9H694 974 aaKnown RBP19.95■□□□□ 0.78
GABRB3-202ENST00000311550 MKNK2Q9HBH9 465 aa19.95■□□□□ 0.78
GABRB3-202ENST00000311550 CCDC102AQ96A19 550 aa19.95■□□□□ 0.78
GABRB3-202ENST00000311550 CFAP65Q6ZU64 1925 aaKnown RBP19.95■□□□□ 0.78
GABRB3-202ENST00000311550 GSDMDP57764 484 aa19.95■□□□□ 0.78
GABRB3-202ENST00000311550 H0YHG0 523 aa19.95■□□□□ 0.78
GABRB3-202ENST00000311550 EDC4Q6P2E9 1401 aaKnown RBP19.94■□□□□ 0.78
GABRB3-202ENST00000311550 HSP90AA4PQ58FG1 418 aa19.94■□□□□ 0.78
GABRB3-202ENST00000311550 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
GABRB3-202ENST00000311550 EIF3JO75822 258 aaKnown RBP19.94■□□□□ 0.78
GABRB3-202ENST00000311550 TFCP2Q12800 502 aa19.94■□□□□ 0.78
GABRB3-202ENST00000311550 CABLES1Q8TDN4 633 aa19.94■□□□□ 0.78
GABRB3-202ENST00000311550 CASQ1P31415 396 aa19.94■□□□□ 0.78
GABRB3-202ENST00000311550 RUFY3Q7L099 469 aa19.94■□□□□ 0.78
GABRB3-202ENST00000311550 RNF41Q9H4P4 317 aaPredicted RBP19.94■□□□□ 0.78
GABRB3-202ENST00000311550 TYRO3Q06418 890 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms