RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
HDLBP-201ENST00000310931 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-201ENST00000310931 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 BCAR3O75815 825 aa11.21□□□□□ -0.61
HDLBP-201ENST00000310931 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
HDLBP-201ENST00000310931 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-201ENST00000310931 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
HDLBP-201ENST00000310931 MCM5P33992 734 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 LMAN1P49257 510 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 MPRIPQ6WCQ1 1025 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.21□□□□□ -0.621e-6■■□□□ 14
HDLBP-201ENST00000310931 MEGF6O75095 1541 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 SLIT2O94813 1529 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 SMC2O95347 1197 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 THUMPD2Q9BTF0 503 aaKnown RBP11.21□□□□□ -0.62
HDLBP-201ENST00000310931 NAT10Q9H0A0 1025 aaKnown RBP11.21□□□□□ -0.62
HDLBP-201ENST00000310931 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.62
HDLBP-201ENST00000310931 DDB1Q16531 1140 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 ANKRD20A12PQ8NF67 263 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-201ENST00000310931 MRC1P22897 1456 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 SPATA31A7Q8IWB4 1347 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 KDM2BQ8NHM5 1336 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 FIBPO43427 364 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 FILIP1Q7Z7B0 1213 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-201ENST00000310931 ANO2Q9NQ90 1003 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 RGPD5Q99666 1765 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 TNS2Q63HR2 1409 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 CCT4P50991 539 aaKnown RBP11.2□□□□□ -0.62
HDLBP-201ENST00000310931 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
HDLBP-201ENST00000310931 SYCE3A1L190 88 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 CCDC192P0DO97 292 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 SMARCC1Q92922 1105 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 LRP6O75581 1613 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 FNBP4Q8N3X1 1017 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 SNRPA1P09661 255 aaKnown RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 NF2P35240 595 aa11.19□□□□□ -0.62
HDLBP-201ENST00000310931 DBF4Q9UBU7 674 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-201ENST00000310931 KIF18AQ8NI77 898 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 C8orf37Q96NL8 207 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 USP21Q9UK80 565 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 ADAMTS7Q9UKP4 1686 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 OFD1O75665 1012 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
HDLBP-201ENST00000310931 EIF4A1P60842 406 aaKnown RBP11.18□□□□□ -0.62
HDLBP-201ENST00000310931 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
HDLBP-201ENST00000310931 TXLNBQ8N3L3 684 aa11.18□□□□□ -0.62
HDLBP-201ENST00000310931 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
HDLBP-201ENST00000310931 PAIP2Q9BPZ3 127 aaKnown RBP11.18□□□□□ -0.62
HDLBP-201ENST00000310931 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
HDLBP-201ENST00000310931 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
HDLBP-201ENST00000310931 ZNF772Q68DY9 489 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-201ENST00000310931 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
HDLBP-201ENST00000310931 CCDC91Q7Z6B0 441 aa11.17□□□□□ -0.62
HDLBP-201ENST00000310931 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-201ENST00000310931 RGPD2P0DJD1 1756 aa11.17□□□□□ -0.62
HDLBP-201ENST00000310931 ZRSR2Q15696 482 aaKnown RBP11.17□□□□□ -0.62
HDLBP-201ENST00000310931 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
HDLBP-201ENST00000310931 ZNF790Q6PG37 636 aa11.17□□□□□ -0.62
HDLBP-201ENST00000310931 C8orf58Q8NAV2 365 aa11.17□□□□□ -0.62
HDLBP-201ENST00000310931 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 GOLGA6L10A6NI86 522 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 IGHDP01880 384 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 HSPA1LP34931 641 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 TTC31Q49AM3 519 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-201ENST00000310931 PANK1Q8TE04 598 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 NRAPQ86VF7 1730 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-201ENST00000310931 GBP2P32456 591 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-201ENST00000310931 LGR6Q9HBX8 967 aa11.16□□□□□ -0.62
HDLBP-201ENST00000310931 KIF2AO00139 706 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-201ENST00000310931 CYP27B1O15528 508 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 A0A0G2JS52 829 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 NEK4P51957 841 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 NEXNQ0ZGT2 675 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 TMX1Q9H3N1 280 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 SCN11AQ9UI33 1791 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
HDLBP-201ENST00000310931 STARD3NLO95772 234 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms