RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 FGD1P98174 961 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 GABPB1Q06547 395 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-202ENST00000310645 NECTIN1Q15223 517 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 AACSQ86V21 672 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 KRT222Q8N1A0 295 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 IL17REQ8NFR9 667 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 ST7Q9NRC1 585 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-202ENST00000310645 LRRC8AQ8IWT6 810 aa17.33■□□□□ 0.36
COL6A2-202ENST00000310645 JAK2O60674 1132 aa17.32■□□□□ 0.36
COL6A2-202ENST00000310645 PPFIA3O75145 1194 aa17.32■□□□□ 0.36
COL6A2-202ENST00000310645 NMIQ13287 307 aaPredicted RBP17.32■□□□□ 0.36
COL6A2-202ENST00000310645 ERCC4Q92889 916 aaPredicted RBP17.32■□□□□ 0.36
COL6A2-202ENST00000310645 TM6SF1Q9BZW5 370 aa17.32■□□□□ 0.36
COL6A2-202ENST00000310645 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
COL6A2-202ENST00000310645 TUBGCP6Q96RT7 1819 aa17.32■□□□□ 0.36
COL6A2-202ENST00000310645 H3BQV1 296 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 C11orf57Q6ZUT1 292 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-202ENST00000310645 MORC2Q9Y6X9 1032 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-202ENST00000310645 ELP1O95163 1332 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 SLC27A2O14975 620 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 SYCP1Q15431 976 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 HSP90AB4PQ58FF6 505 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-202ENST00000310645 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 PSMA5P28066 241 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-202ENST00000310645 GPATCH3Q96I76 525 aa17.31■□□□□ 0.36
COL6A2-202ENST00000310645 TERF2Q15554 542 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 RIMS1Q86UR5 1692 aaKnown RBP17.3■□□□□ 0.36
COL6A2-202ENST00000310645 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 DLC1Q96QB1 1528 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 PREX1Q8TCU6 1659 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 VGLL3A8MV65 326 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
COL6A2-202ENST00000310645 FBXO38Q6PIJ6 1188 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 BOLA2Q9H3K6 86 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
COL6A2-202ENST00000310645 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
COL6A2-202ENST00000310645 TRERF1Q96PN7 1200 aa17.29■□□□□ 0.36
COL6A2-202ENST00000310645 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
COL6A2-202ENST00000310645 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
COL6A2-202ENST00000310645 TAF3Q5VWG9 929 aa17.29■□□□□ 0.36
COL6A2-202ENST00000310645 BRF1Q92994 677 aa17.29■□□□□ 0.36
COL6A2-202ENST00000310645 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
COL6A2-202ENST00000310645 FTOQ9C0B1 505 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL6A2-202ENST00000310645 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
COL6A2-202ENST00000310645 EVI5LQ96CN4 794 aa17.28■□□□□ 0.36
COL6A2-202ENST00000310645 SIL1Q9H173 461 aa17.28■□□□□ 0.36
COL6A2-202ENST00000310645 A0A0D9SFI3 127 aa17.28■□□□□ 0.36
COL6A2-202ENST00000310645 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
COL6A2-202ENST00000310645 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
COL6A2-202ENST00000310645 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
COL6A2-202ENST00000310645 MAP4K1Q92918 833 aa17.27■□□□□ 0.36
COL6A2-202ENST00000310645 BEND3Q5T5X7 828 aa17.27■□□□□ 0.35
COL6A2-202ENST00000310645 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.35
COL6A2-202ENST00000310645 NAP1L2Q9ULW6 460 aaPredicted RBP17.27■□□□□ 0.35
COL6A2-202ENST00000310645 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
COL6A2-202ENST00000310645 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
COL6A2-202ENST00000310645 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
COL6A2-202ENST00000310645 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
COL6A2-202ENST00000310645 TMEM51Q9NW97 253 aa17.26■□□□□ 0.35
COL6A2-202ENST00000310645 IQCB1Q15051 598 aa17.25■□□□□ 0.35
COL6A2-202ENST00000310645 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
COL6A2-202ENST00000310645 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
COL6A2-202ENST00000310645 GTF3C6Q969F1 213 aa17.25■□□□□ 0.35
COL6A2-202ENST00000310645 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
COL6A2-202ENST00000310645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.25■□□□□ 0.35
COL6A2-202ENST00000310645 KCNQ3O43525 872 aa17.25■□□□□ 0.35
COL6A2-202ENST00000310645 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
COL6A2-202ENST00000310645 CCDC66A2RUB6 948 aa17.25■□□□□ 0.35
COL6A2-202ENST00000310645 ERCC6LQ2NKX8 1250 aa17.25■□□□□ 0.35
COL6A2-202ENST00000310645 RBM43Q6ZSC3 357 aaKnown RBP17.25■□□□□ 0.35
COL6A2-202ENST00000310645 SLU7O95391 586 aaKnown RBP17.24■□□□□ 0.35
COL6A2-202ENST00000310645 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 TLR7Q9NYK1 1049 aaKnown RBP17.24■□□□□ 0.35
COL6A2-202ENST00000310645 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 NLRP6P59044 892 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
COL6A2-202ENST00000310645 AOPEPQ8N6M6 819 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 ERO1AQ96HE7 468 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 FLT4P35916 1363 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 HTATSF1O43719 755 aaKnown RBP17.24■□□□□ 0.35
COL6A2-202ENST00000310645 ZNF589Q86UQ0 364 aaPredicted RBP17.24■□□□□ 0.35
COL6A2-202ENST00000310645 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
COL6A2-202ENST00000310645 KCNB2Q92953 911 aa17.24■□□□□ 0.35
COL6A2-202ENST00000310645 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 STX1AQ16623 288 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 NYAP1Q6ZVC0 841 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 EAF2Q96CJ1 260 aaPredicted RBP17.23■□□□□ 0.35
COL6A2-202ENST00000310645 OVOS2A0A0J9YW53 1432 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 OVOS2Q6IE36 1432 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 CCDC73Q6ZRK6 1079 aa17.23■□□□□ 0.35
COL6A2-202ENST00000310645 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms