RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 TFCP2Q12800 502 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 NECAB1Q8N987 351 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 A0A0D9SFI3 127 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 A1BGP04217 495 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 CYP46A1Q9Y6A2 500 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 CHGBP05060 677 aa13.87□□□□□ -0.19
PTPN2-201ENST00000309660 LMBR1LQ6UX01 489 aa13.87□□□□□ -0.19
PTPN2-201ENST00000309660 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
PTPN2-201ENST00000309660 CCDC85AQ96PX6 553 aaPredicted RBP13.87□□□□□ -0.19
PTPN2-201ENST00000309660 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
PTPN2-201ENST00000309660 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
PTPN2-201ENST00000309660 EVA1CP58658 441 aa13.87□□□□□ -0.19
PTPN2-201ENST00000309660 FIBPO43427 364 aa13.86□□□□□ -0.19
PTPN2-201ENST00000309660 GADD45BO75293 160 aaPredicted RBP13.86□□□□□ -0.19
PTPN2-201ENST00000309660 TTLL7Q6ZT98 887 aa13.86□□□□□ -0.19
PTPN2-201ENST00000309660 SPATA31A3Q5VYP0 1347 aa13.86□□□□□ -0.19
PTPN2-201ENST00000309660 A0A0G2JS52 829 aa13.86□□□□□ -0.19
PTPN2-201ENST00000309660 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
PTPN2-201ENST00000309660 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
PTPN2-201ENST00000309660 STK3Q13188 491 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
PTPN2-201ENST00000309660 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
PTPN2-201ENST00000309660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.192e-7■■■□□ 15.9
PTPN2-201ENST00000309660 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
PTPN2-201ENST00000309660 TTC14Q96N46 770 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 DBNDD2Q9BQY9 259 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 DBNLQ9UJU6 430 aaKnown RBP13.85□□□□□ -0.19
PTPN2-201ENST00000309660 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
PTPN2-201ENST00000309660 OVOS2A0A0G2JMS6 1433 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
PTPN2-201ENST00000309660 ESPNB1AK53 854 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 SYT1P21579 422 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
PTPN2-201ENST00000309660 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 TAF6LQ9Y6J9 622 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 TNS3Q68CZ2 1445 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 GJB2P29033 226 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 PTPN12Q05209 780 aaKnown RBP13.84□□□□□ -0.19
PTPN2-201ENST00000309660 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
PTPN2-201ENST00000309660 UTYO14607 1347 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 STX6O43752 255 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 MBD3O95983 291 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 TNNI3KQ59H18 835 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 FPGT-TNNI3KV9GXZ4 949 aa13.84□□□□□ -0.19
PTPN2-201ENST00000309660 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 ZNF445P59923 1031 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
PTPN2-201ENST00000309660 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 SEC62Q99442 399 aaKnown RBP13.83□□□□□ -0.2
PTPN2-201ENST00000309660 ERBB4Q15303 1308 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 HIP1O00291 1037 aa13.83□□□□□ -0.2
PTPN2-201ENST00000309660 ZNF594Q96JF6 807 aaPredicted RBP13.83□□□□□ -0.2
PTPN2-201ENST00000309660 TRPM3Q9HCF6 1732 aaPredicted RBP13.83□□□□□ -0.2
PTPN2-201ENST00000309660 SLC27A2O14975 620 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 TIMM10P62072 90 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 FGD1P98174 961 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 SLFNL1Q499Z3 407 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 BLOC1S2Q6QNY1 142 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 PLBD2Q8NHP8 589 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
PTPN2-201ENST00000309660 ZSCAN22P10073 491 aaPredicted RBP13.82□□□□□ -0.2
PTPN2-201ENST00000309660 ME3Q16798 604 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
PTPN2-201ENST00000309660 PHRF1Q9P1Y6 1649 aaKnown RBP13.82□□□□□ -0.2
PTPN2-201ENST00000309660 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 LRP10Q7Z4F1 713 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 KAT6BQ8WYB5 2073 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 COPRSQ9NQ92 184 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
PTPN2-201ENST00000309660 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 ZSWIM6Q9HCJ5 1215 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 TPCN1Q9ULQ1 816 aa13.81□□□□□ -0.2
PTPN2-201ENST00000309660 GOLIM4O00461 696 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-201ENST00000309660 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 RPAP1Q9BWH6 1393 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-201ENST00000309660 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-201ENST00000309660 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 HSP90B1P14625 803 aaKnown RBP13.8□□□□□ -0.2
PTPN2-201ENST00000309660 IL2RBP14784 551 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 PSMA5P28066 241 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
PTPN2-201ENST00000309660 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 MPNDQ8N594 471 aa13.8□□□□□ -0.2
PTPN2-201ENST00000309660 SYTL4Q96C24 671 aaPredicted RBP13.8□□□□□ -0.2
PTPN2-201ENST00000309660 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms