RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SMARCA5O60264 1052 aaPredicted RBP10.46□□□□□ -0.74
CHD6-201ENST00000309279 TRAK2O60296 914 aa10.46□□□□□ -0.74
CHD6-201ENST00000309279 MYL6BP14649 208 aa10.46□□□□□ -0.74
CHD6-201ENST00000309279 IGSF5Q9NSI5 407 aa10.46□□□□□ -0.74
CHD6-201ENST00000309279 HYPKQ9NX55 129 aa10.46□□□□□ -0.74
CHD6-201ENST00000309279 ANXA1P04083 346 aa10.45□□□□□ -0.74
CHD6-201ENST00000309279 GYS1P13807 737 aa10.45□□□□□ -0.74
CHD6-201ENST00000309279 FAM43BQ6ZT52 329 aaPredicted RBP10.45□□□□□ -0.74
CHD6-201ENST00000309279 ANKRD13AQ8IZ07 590 aa10.45□□□□□ -0.74
CHD6-201ENST00000309279 MTFR1LQ9H019 292 aa10.45□□□□□ -0.74
CHD6-201ENST00000309279 TBC1D2BQ9UPU7 963 aa10.45□□□□□ -0.74
CHD6-201ENST00000309279 BCORQ6W2J9 1755 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 ERVV-1B6SEH8 477 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 MSH5O43196 834 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 ZPR1O75312 459 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 CAMTA2O94983 1202 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 CLEC4GQ6UXB4 293 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 COPS6Q7L5N1 327 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
CHD6-201ENST00000309279 SPATA32Q96LK8 384 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 NAP1L2Q9ULW6 460 aaPredicted RBP10.44□□□□□ -0.74
CHD6-201ENST00000309279 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
CHD6-201ENST00000309279 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 ZBTB7AO95365 584 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 TTLL7Q6ZT98 887 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
CHD6-201ENST00000309279 SRP68Q9UHB9 627 aaKnown RBP10.44□□□□□ -0.74
CHD6-201ENST00000309279 NUP98P52948 1817 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 BRD1O95696 1058 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 NOL8Q76FK4 1167 aaKnown RBP10.43□□□□□ -0.74
CHD6-201ENST00000309279 XAGE3Q8WTP9 111 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 SECISBP2LQ93073 1101 aaKnown RBP10.43□□□□□ -0.74
CHD6-201ENST00000309279 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 PHAXQ9H814 394 aaKnown RBP10.43□□□□□ -0.74
CHD6-201ENST00000309279 MAP3K15Q6ZN16 1313 aa10.43□□□□□ -0.74
CHD6-201ENST00000309279 TCERG1O14776 1098 aaKnown RBP10.42□□□□□ -0.74
CHD6-201ENST00000309279 TM4SF1P30408 202 aa10.42□□□□□ -0.74
CHD6-201ENST00000309279 PTGER2P43116 358 aa10.42□□□□□ -0.74
CHD6-201ENST00000309279 KIF6Q6ZMV9 814 aa10.42□□□□□ -0.74
CHD6-201ENST00000309279 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
CHD6-201ENST00000309279 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
CHD6-201ENST00000309279 SPON1Q9HCB6 807 aa10.42□□□□□ -0.74
CHD6-201ENST00000309279 AIMP1Q12904 312 aaKnown RBP10.41□□□□□ -0.74
CHD6-201ENST00000309279 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
CHD6-201ENST00000309279 G2E3Q7L622 706 aa10.41□□□□□ -0.74
CHD6-201ENST00000309279 PLBD2Q8NHP8 589 aa10.41□□□□□ -0.74
CHD6-201ENST00000309279 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
CHD6-201ENST00000309279 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
CHD6-201ENST00000309279 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.74
CHD6-201ENST00000309279 FLIIQ13045 1269 aa10.4□□□□□ -0.74
CHD6-201ENST00000309279 HLFQ16534 295 aa10.4□□□□□ -0.74
CHD6-201ENST00000309279 MSL1Q68DK7 614 aa10.4□□□□□ -0.74
CHD6-201ENST00000309279 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
CHD6-201ENST00000309279 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
CHD6-201ENST00000309279 ZNF652Q9Y2D9 606 aa10.4□□□□□ -0.74
CHD6-201ENST00000309279 ATP10DQ9P241 1426 aa10.4□□□□□ -0.75
CHD6-201ENST00000309279 A6NJR5 290 aa10.4□□□□□ -0.75
CHD6-201ENST00000309279 NFIXQ14938 502 aa10.4□□□□□ -0.75
CHD6-201ENST00000309279 TBC1D9BQ66K14 1250 aa10.4□□□□□ -0.75
CHD6-201ENST00000309279 KSR2Q6VAB6 950 aa10.4□□□□□ -0.75
CHD6-201ENST00000309279 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.75
CHD6-201ENST00000309279 LRP5O75197 1615 aa10.39□□□□□ -0.75
CHD6-201ENST00000309279 DDX58O95786 925 aaKnown RBP10.39□□□□□ -0.75
CHD6-201ENST00000309279 MMP10P09238 476 aa10.39□□□□□ -0.75
CHD6-201ENST00000309279 ZNF34Q8IZ26 560 aa10.39□□□□□ -0.75
CHD6-201ENST00000309279 TMTC2Q8N394 836 aa10.39□□□□□ -0.75
CHD6-201ENST00000309279 KCNV2Q8TDN2 545 aa10.39□□□□□ -0.75
CHD6-201ENST00000309279 ARFGEF2Q9Y6D5 1785 aa10.39□□□□□ -0.75
CHD6-201ENST00000309279 ADCY9O60503 1353 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 ANKRD36CQ5JPF3 1778 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 NRXN2Q9P2S2 1712 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 PI4KAP2A4QPH2 592 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 UNCXA6NJT0 531 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
CHD6-201ENST00000309279 POLD1P28340 1107 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 DDR1Q08345 913 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 TRIM28Q13263 835 aaKnown RBP10.38□□□□□ -0.75
CHD6-201ENST00000309279 TCIRG1Q13488 830 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 HSP90AB3PQ58FF7 597 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 RIC3Q7Z5B4 369 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 PI4KAP1Q8N8J0 262 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 IPO4Q8TEX9 1081 aaKnown RBP10.38□□□□□ -0.75
CHD6-201ENST00000309279 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 SETDB2Q96T68 719 aa10.38□□□□□ -0.75
CHD6-201ENST00000309279 AFDNP55196 1824 aaKnown RBP10.38□□□□□ -0.75
CHD6-201ENST00000309279 PTPRCP08575 1304 aa10.37□□□□□ -0.75
CHD6-201ENST00000309279 FKBP5Q13451 457 aaPredicted RBP10.37□□□□□ -0.75
CHD6-201ENST00000309279 METTL22Q9BUU2 404 aaPredicted RBP10.37□□□□□ -0.75
CHD6-201ENST00000309279 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
CHD6-201ENST00000309279 SMC4Q9NTJ3 1288 aa10.37□□□□□ -0.75
CHD6-201ENST00000309279 NIP7Q9Y221 180 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHD6-201ENST00000309279 GOLGB1Q14789 3259 aaKnown RBP10.37□□□□□ -0.75
CHD6-201ENST00000309279 CARMIL3Q8ND23 1372 aa10.37□□□□□ -0.75
CHD6-201ENST00000309279 GTPBP6O43824 516 aaPredicted RBP10.36□□□□□ -0.75
CHD6-201ENST00000309279 GLIPR1L2Q4G1C9 344 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms