RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CELF2O95319 508 aaKnown RBP15.98■□□□□ 0.15
SMIM4-201ENST00000307106 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
SMIM4-201ENST00000307106 CC2D2BQ6DHV5 1058 aa15.98■□□□□ 0.15
SMIM4-201ENST00000307106 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
SMIM4-201ENST00000307106 GAS2L2Q8NHY3 880 aa15.98■□□□□ 0.15
SMIM4-201ENST00000307106 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
SMIM4-201ENST00000307106 CIAPIN1Q6FI81 312 aa15.97■□□□□ 0.15
SMIM4-201ENST00000307106 HHIPL1Q96JK4 782 aa15.97■□□□□ 0.15
SMIM4-201ENST00000307106 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
SMIM4-201ENST00000307106 RGL2O15211 777 aa15.96■□□□□ 0.15
SMIM4-201ENST00000307106 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
SMIM4-201ENST00000307106 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
SMIM4-201ENST00000307106 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
SMIM4-201ENST00000307106 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
SMIM4-201ENST00000307106 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
SMIM4-201ENST00000307106 GLIS2Q9BZE0 524 aaPredicted RBP15.95■□□□□ 0.14
SMIM4-201ENST00000307106 GPRC5DQ9NZD1 345 aa15.95■□□□□ 0.14
SMIM4-201ENST00000307106 LAMB2P55268 1798 aa15.95■□□□□ 0.14
SMIM4-201ENST00000307106 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
SMIM4-201ENST00000307106 SOX10P56693 466 aa15.94■□□□□ 0.14
SMIM4-201ENST00000307106 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMIM4-201ENST00000307106 HLFQ16534 295 aa15.94■□□□□ 0.14
SMIM4-201ENST00000307106 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
SMIM4-201ENST00000307106 ZNF408Q9H9D4 720 aa15.94■□□□□ 0.14
SMIM4-201ENST00000307106 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
SMIM4-201ENST00000307106 NBPF26B4DH59 902 aa15.93■□□□□ 0.14
SMIM4-201ENST00000307106 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
SMIM4-201ENST00000307106 NBPF10Q6P3W6 841 aaKnown RBP15.93■□□□□ 0.14
SMIM4-201ENST00000307106 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
SMIM4-201ENST00000307106 NBPF15Q8N660 670 aa15.93■□□□□ 0.14
SMIM4-201ENST00000307106 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
SMIM4-201ENST00000307106 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
SMIM4-201ENST00000307106 RIC1Q4ADV7 1423 aa15.93■□□□□ 0.14
SMIM4-201ENST00000307106 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
SMIM4-201ENST00000307106 NOGQ13253 232 aa15.92■□□□□ 0.14
SMIM4-201ENST00000307106 PRPF38BQ5VTL8 546 aaKnown RBP15.92■□□□□ 0.14
SMIM4-201ENST00000307106 ZIC5Q96T25 663 aa15.92■□□□□ 0.14
SMIM4-201ENST00000307106 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
SMIM4-201ENST00000307106 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
SMIM4-201ENST00000307106 ANKRD36CQ5JPF3 1778 aa15.91■□□□□ 0.14
SMIM4-201ENST00000307106 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
SMIM4-201ENST00000307106 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
SMIM4-201ENST00000307106 HOXA10P31260 410 aaPredicted RBP15.91■□□□□ 0.14
SMIM4-201ENST00000307106 SLC51AQ86UW1 340 aa15.91■□□□□ 0.14
SMIM4-201ENST00000307106 TAF1P21675 1872 aa15.91■□□□□ 0.14
SMIM4-201ENST00000307106 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
SMIM4-201ENST00000307106 PPEF1O14829 653 aaPredicted RBP15.9■□□□□ 0.14
SMIM4-201ENST00000307106 AOC3Q16853 763 aa15.9■□□□□ 0.14
SMIM4-201ENST00000307106 PGAP2Q9UHJ9 254 aa15.9■□□□□ 0.14
SMIM4-201ENST00000307106 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
SMIM4-201ENST00000307106 GMPSP49915 693 aaPredicted RBP15.89■□□□□ 0.13
SMIM4-201ENST00000307106 CXCL9Q07325 125 aa15.89■□□□□ 0.13
SMIM4-201ENST00000307106 CDC37L1Q7L3B6 337 aa15.89■□□□□ 0.13
SMIM4-201ENST00000307106 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
SMIM4-201ENST00000307106 CRAMP1Q96RY5 1269 aa15.89■□□□□ 0.13
SMIM4-201ENST00000307106 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
SMIM4-201ENST00000307106 HUNKP57058 714 aa15.88■□□□□ 0.13
SMIM4-201ENST00000307106 ZC3H15Q8WU90 426 aaKnown RBP15.88■□□□□ 0.13
SMIM4-201ENST00000307106 ZNRF3Q9ULT6 936 aa15.88■□□□□ 0.13
SMIM4-201ENST00000307106 HIRAP54198 1017 aaPredicted RBP15.87■□□□□ 0.13
SMIM4-201ENST00000307106 TMX4Q9H1E5 349 aaPredicted RBP15.87■□□□□ 0.13
SMIM4-201ENST00000307106 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
SMIM4-201ENST00000307106 SAGE1Q9NXZ1 904 aa15.87■□□□□ 0.13
SMIM4-201ENST00000307106 CDHR2Q9BYE9 1310 aa15.87■□□□□ 0.13
SMIM4-201ENST00000307106 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
SMIM4-201ENST00000307106 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
SMIM4-201ENST00000307106 TRPM4Q8TD43 1214 aa15.86■□□□□ 0.13
SMIM4-201ENST00000307106 PHACTR3Q96KR7 559 aa15.86■□□□□ 0.13
SMIM4-201ENST00000307106 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
SMIM4-201ENST00000307106 NGEFQ8N5V2 710 aa15.85■□□□□ 0.13
SMIM4-201ENST00000307106 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
SMIM4-201ENST00000307106 FAM155AB1AL88 458 aaPredicted RBP15.84■□□□□ 0.13
SMIM4-201ENST00000307106 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 GPTP24298 496 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 RGMBQ6NW40 437 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 MCM10Q7L590 875 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 USP48Q86UV5 1035 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 SUPT20HQ8NEM7 779 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
SMIM4-201ENST00000307106 ATP6V0A2Q9Y487 856 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 DDX60Q8IY21 1712 aaKnown RBP15.84■□□□□ 0.13
SMIM4-201ENST00000307106 MAP3K15Q6ZN16 1313 aa15.84■□□□□ 0.13
SMIM4-201ENST00000307106 TRPA1O75762 1119 aa15.83■□□□□ 0.12
SMIM4-201ENST00000307106 KIF23Q02241 960 aaPredicted RBP15.83■□□□□ 0.12
SMIM4-201ENST00000307106 SUSD4Q5VX71 490 aa15.83■□□□□ 0.12
SMIM4-201ENST00000307106 C3orf67Q6ZVT6 689 aa15.83■□□□□ 0.12
SMIM4-201ENST00000307106 RNF186Q9NXI6 227 aa15.83■□□□□ 0.12
SMIM4-201ENST00000307106 CNOT7Q9UIV1 285 aaKnown RBP15.83■□□□□ 0.12
SMIM4-201ENST00000307106 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 SHTN1A0MZ66 631 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 RAD17O75943 681 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 TNIP1Q15025 636 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 DLK2Q6UY11 383 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 KIF6Q6ZMV9 814 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
SMIM4-201ENST00000307106 CCDC102AQ96A19 550 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 RTFDC1Q9BY42 306 aaPredicted RBP15.82■□□□□ 0.12
SMIM4-201ENST00000307106 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
SMIM4-201ENST00000307106 H7C1D1 291 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms