RNA–Protein interactions for RNA: ENST00000304457.11

EXOSC10-201, Transcript of exosome component 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXOSC10, Length 2,721 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-201ENST00000304457 NUCB2P80303 420 aa11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 GSPT1P15170 499 aaKnown RBP11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 PPP4R3BQ5MIZ7 849 aa11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 MCTP1Q6DN14 999 aa11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 LMBRD1Q9NUN5 540 aa11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
EXOSC10-201ENST00000304457 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
EXOSC10-201ENST00000304457 PKD1L3Q7Z443 1732 aa11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 USP54Q70EL1 1684 aa11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 FAM193AP78312 1265 aa11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 NFE2L2Q16236 605 aa11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.54
EXOSC10-201ENST00000304457 LRSAM1Q6UWE0 723 aa11.65□□□□□ -0.55
EXOSC10-201ENST00000304457 NME9Q86XW9 330 aa11.65□□□□□ -0.55
EXOSC10-201ENST00000304457 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.55
EXOSC10-201ENST00000304457 ABTB2Q8N961 1025 aa11.65□□□□□ -0.55
EXOSC10-201ENST00000304457 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.55
EXOSC10-201ENST00000304457 CDC45O75419 566 aa11.64□□□□□ -0.55
EXOSC10-201ENST00000304457 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
EXOSC10-201ENST00000304457 LRRC4BQ9NT99 713 aa11.64□□□□□ -0.55
EXOSC10-201ENST00000304457 ZGPATQ8N5A5 531 aaKnown RBP11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 MAFGO15525 162 aa11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 GNAI1P63096 354 aa11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
EXOSC10-201ENST00000304457 SOX12O15370 315 aa11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 ACEP12821 1306 aa11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 CD163L1Q9NR16 1453 aa11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 PRPF40AO75400 957 aaKnown RBP11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 KCNH5Q8NCM2 988 aa11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
EXOSC10-201ENST00000304457 FOXD4L6Q3SYB3 417 aaPredicted RBP11.61□□□□□ -0.55
EXOSC10-201ENST00000304457 FOXD4L3Q6VB84 417 aaPredicted RBP11.61□□□□□ -0.55
EXOSC10-201ENST00000304457 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
EXOSC10-201ENST00000304457 FAM208AQ9UK61 1670 aaKnown RBP11.61□□□□□ -0.55
EXOSC10-201ENST00000304457 TSHZ3Q63HK5 1081 aa11.61□□□□□ -0.55
EXOSC10-201ENST00000304457 MLLT1Q03111 559 aaPredicted RBP11.6□□□□□ -0.55
EXOSC10-201ENST00000304457 RABEP1Q15276 862 aa11.6□□□□□ -0.55
EXOSC10-201ENST00000304457 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
EXOSC10-201ENST00000304457 SDSP20132 328 aa11.6□□□□□ -0.55
EXOSC10-201ENST00000304457 GPT2Q8TD30 523 aa11.6□□□□□ -0.55
EXOSC10-201ENST00000304457 IL13P35225 146 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 CBX1P83916 185 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 TTC22Q5TAA0 569 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 MCM10Q7L590 875 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 PIBF1Q8WXW3 757 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 ARHGAP45Q92619 1136 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 IFT57Q9NWB7 429 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 ABCC4O15439 1325 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 ARFGEF1Q9Y6D6 1849 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 DCTPP1Q9H773 170 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 C5P01031 1676 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 KIAA1551Q9HCM1 1747 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 MBD3O95983 291 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 KIF3AQ9Y496 699 aa11.59□□□□□ -0.55
EXOSC10-201ENST00000304457 ZNF853P0CG23 659 aa11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 MEIS3Q99687 375 aa11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 API5Q9BZZ5 524 aaKnown RBP11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 ARHGEF25Q86VW2 580 aa11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
EXOSC10-201ENST00000304457 F6X3S4 739 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 TGFB2P61812 414 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 DNTTIP2Q5QJE6 756 aaKnown RBP11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 MPNDQ8N594 471 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 NMRK2Q9NPI5 230 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 MAP2P11137 1827 aaKnown RBP11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 RNF214Q8ND24 703 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 SPTLC3Q9NUV7 552 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 TMEM51Q9NW97 253 aa11.57□□□□□ -0.56
EXOSC10-201ENST00000304457 SYCE3A1L190 88 aa11.56□□□□□ -0.56
EXOSC10-201ENST00000304457 NOLC1Q14978 699 aaKnown RBP eCLIP11.56□□□□□ -0.56
EXOSC10-201ENST00000304457 ZDHHC9Q9Y397 364 aa11.56□□□□□ -0.56
EXOSC10-201ENST00000304457 IL2RBP14784 551 aa11.56□□□□□ -0.56
EXOSC10-201ENST00000304457 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms