RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 ZNRF3Q9ULT6 936 aa7.65□□□□□ -1.18
ZNF440-201ENST00000304060 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.19
ZNF440-201ENST00000304060 RGMBQ6NW40 437 aa7.65□□□□□ -1.19
ZNF440-201ENST00000304060 INTS5Q6P9B9 1019 aaKnown RBP7.65□□□□□ -1.19
ZNF440-201ENST00000304060 BBOX1O75936 387 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 SLC39A6Q13433 755 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 MPNDQ8N594 471 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 MAPK8IP3Q9UPT6 1336 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 NCAPD2Q15021 1401 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 PPEF1O14829 653 aaPredicted RBP7.64□□□□□ -1.19
ZNF440-201ENST00000304060 RPS12P25398 132 aaKnown RBP7.64□□□□□ -1.19
ZNF440-201ENST00000304060 FKBP1BP68106 108 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 KIF22Q14807 665 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 SUPT16HQ9Y5B9 1047 aaKnown RBP7.64□□□□□ -1.19
ZNF440-201ENST00000304060 FANCIQ9NVI1 1328 aa7.64□□□□□ -1.19
ZNF440-201ENST00000304060 TBC1D9BQ66K14 1250 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 ARMC9Q7Z3E5 817 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 CRAMP1Q96RY5 1269 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 PASKQ96RG2 1323 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 ZNF790Q6PG37 636 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 KRT26Q7Z3Y9 468 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 OGFOD1Q8N543 542 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 USP54Q70EL1 1684 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 C6orf229H3BNL8 230 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 LMOD3Q0VAK6 560 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 TESK2Q96S53 571 aa7.63□□□□□ -1.19
ZNF440-201ENST00000304060 COL24A1Q17RW2 1714 aa7.62□□□□□ -1.19
ZNF440-201ENST00000304060 TCERG1O14776 1098 aaKnown RBP7.62□□□□□ -1.19
ZNF440-201ENST00000304060 KDM6AO15550 1401 aaPredicted RBP7.62□□□□□ -1.19
ZNF440-201ENST00000304060 HEG1Q9ULI3 1381 aa7.62□□□□□ -1.19
ZNF440-201ENST00000304060 SOX10P56693 466 aa7.62□□□□□ -1.19
ZNF440-201ENST00000304060 ZC3H12CQ9C0D7 883 aaKnown RBP7.62□□□□□ -1.19
ZNF440-201ENST00000304060 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
ZNF440-201ENST00000304060 HMOX1P09601 288 aa7.62□□□□□ -1.19
ZNF440-201ENST00000304060 PANK3Q9H999 370 aa7.62□□□□□ -1.19
ZNF440-201ENST00000304060 NR2E3Q9Y5X4 410 aa7.62□□□□□ -1.19
ZNF440-201ENST00000304060 UTP14AQ9BVJ6 771 aaKnown RBP7.61□□□□□ -1.19
ZNF440-201ENST00000304060 TRPA1O75762 1119 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 MMP14P50281 582 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 NGEFQ8N5V2 710 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 FZD9O00144 591 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 FKTNO75072 461 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 ERO1AQ96HE7 468 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 GPRC5DQ9NZD1 345 aa7.61□□□□□ -1.19
ZNF440-201ENST00000304060 RRP7AQ9Y3A4 280 aaKnown RBP7.61□□□□□ -1.19
ZNF440-201ENST00000304060 ERVV-1B6SEH8 477 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
ZNF440-201ENST00000304060 NECTIN2Q92692 538 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 ARFGEF1Q9Y6D6 1849 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 MYO1BO43795 1136 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 INHBEP58166 350 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 FBXO46Q6PJ61 603 aaPredicted RBP7.6□□□□□ -1.19
ZNF440-201ENST00000304060 USP48Q86UV5 1035 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 UBR3Q6ZT12 1888 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 GMPSP49915 693 aaPredicted RBP7.6□□□□□ -1.19
ZNF440-201ENST00000304060 RBM26Q5T8P6 1007 aaKnown RBP7.6□□□□□ -1.19
ZNF440-201ENST00000304060 CNOT7Q9UIV1 285 aaKnown RBP7.6□□□□□ -1.19
ZNF440-201ENST00000304060 TSKSQ9UJT2 592 aa7.6□□□□□ -1.19
ZNF440-201ENST00000304060 ERBB4Q15303 1308 aa7.59□□□□□ -1.19
ZNF440-201ENST00000304060 SLC4A8Q2Y0W8 1093 aa7.59□□□□□ -1.19
ZNF440-201ENST00000304060 ANKRD13DQ6ZTN6 518 aa7.59□□□□□ -1.19
ZNF440-201ENST00000304060 DPF2Q92785 391 aa7.59□□□□□ -1.19
ZNF440-201ENST00000304060 ZNF496Q96IT1 587 aaPredicted RBP7.59□□□□□ -1.19
ZNF440-201ENST00000304060 U2AF1L5P0DN76 240 aaPredicted RBP7.59□□□□□ -1.19
ZNF440-201ENST00000304060 U2AF1Q01081 240 aaKnown RBP eCLIP7.59□□□□□ -1.19
ZNF440-201ENST00000304060 KIF23Q02241 960 aaPredicted RBP7.59□□□□□ -1.19
ZNF440-201ENST00000304060 PKD1L3Q7Z443 1732 aa7.59□□□□□ -1.19
ZNF440-201ENST00000304060 AMIGO3Q86WK7 504 aa7.59□□□□□ -1.2
ZNF440-201ENST00000304060 HTATIP2Q9BUP3 242 aa7.59□□□□□ -1.2
ZNF440-201ENST00000304060 ZNF541Q9H0D2 1346 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 NPC1L1Q9UHC9 1359 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 SLC4A9Q96Q91 983 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 AOC2O75106 756 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 A1BGP04217 495 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 EPS15P42566 896 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 TAF7Q15545 349 aaPredicted RBP7.58□□□□□ -1.2
ZNF440-201ENST00000304060 SAPCD2Q86UD0 394 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 GLIS2Q9BZE0 524 aaPredicted RBP7.58□□□□□ -1.2
ZNF440-201ENST00000304060 CAPN2P17655 700 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 FBXW7Q969H0 707 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 HOOK2Q96ED9 719 aa7.58□□□□□ -1.2
ZNF440-201ENST00000304060 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
ZNF440-201ENST00000304060 CAMTA2O94983 1202 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 AEBP1Q8IUX7 1158 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 SP8Q8IXZ3 490 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 TUBGCP6Q96RT7 1819 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 POTEIP0CG38 1075 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 POTEJP0CG39 1038 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 HOXD10P28358 340 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 ATP6V0A2Q9Y487 856 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 N4BP2Q86UW6 1770 aaPredicted RBP7.57□□□□□ -1.2
ZNF440-201ENST00000304060 PDE4DIPQ5VU43 2346 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 CNGB1Q14028 1251 aaPredicted RBP7.57□□□□□ -1.2
ZNF440-201ENST00000304060 WASHC4Q2M389 1173 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
ZNF440-201ENST00000304060 TRMT112Q9UI30 125 aaKnown RBP7.57□□□□□ -1.2
ZNF440-201ENST00000304060 MANSC4A6NHS7 340 aaPredicted RBP7.56□□□□□ -1.2
ZNF440-201ENST00000304060 KCNJ4P48050 445 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms