RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 FAM193AP78312 1265 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 CNKSR2Q8WXI2 1034 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 TEX13AQ9BXU3 409 aaPredicted RBP24.1■■□□□ 1.45
LTBP3-201ENST00000301873 PHAXQ9H814 394 aaKnown RBP24.1■■□□□ 1.45
LTBP3-201ENST00000301873 MYO6Q9UM54 1294 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 DUOX2Q9NRD8 1548 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 CCDC194A0A1B0GVG4 234 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 PUS7Q96PZ0 661 aaKnown RBP24.1■■□□□ 1.45
LTBP3-201ENST00000301873 UHRF1BP1LA0JNW5 1464 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 G2E3Q7L622 706 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 CRACR2BQ8N4Y2 399 aaPredicted RBP24.1■■□□□ 1.45
LTBP3-201ENST00000301873 SNX21Q969T3 373 aa24.1■■□□□ 1.45
LTBP3-201ENST00000301873 MAP3K19Q56UN5 1328 aa24.09■■□□□ 1.45
LTBP3-201ENST00000301873 METAP2P50579 478 aaKnown RBP eCLIP24.09■■□□□ 1.45
LTBP3-201ENST00000301873 ANAPC15P60006 121 aa24.09■■□□□ 1.45
LTBP3-201ENST00000301873 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
LTBP3-201ENST00000301873 USP48Q86UV5 1035 aa24.09■■□□□ 1.45
LTBP3-201ENST00000301873 SLC26A6Q9BXS9 759 aa24.09■■□□□ 1.45
LTBP3-201ENST00000301873 CATIPQ7Z7H3 387 aa24.09■■□□□ 1.45
LTBP3-201ENST00000301873 ZBTB7BO15156 539 aaPredicted RBP24.09■■□□□ 1.45
LTBP3-201ENST00000301873 ZNF830Q96NB3 372 aaPredicted RBP24.09■■□□□ 1.45
LTBP3-201ENST00000301873 KIF4BQ2VIQ3 1234 aa24.08■■□□□ 1.45
LTBP3-201ENST00000301873 DNM1Q05193 864 aaKnown RBP24.08■■□□□ 1.45
LTBP3-201ENST00000301873 PIK3C2GO75747 1445 aa24.08■■□□□ 1.45
LTBP3-201ENST00000301873 MFSD6Q6ZSS7 791 aa24.08■■□□□ 1.44
LTBP3-201ENST00000301873 C6orf229H3BNL8 230 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 MCM5P33992 734 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 ENOX2Q16206 610 aaKnown RBP24.07■■□□□ 1.44
LTBP3-201ENST00000301873 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
LTBP3-201ENST00000301873 ZCRB1Q8TBF4 217 aaKnown RBP24.07■■□□□ 1.44
LTBP3-201ENST00000301873 TTF1Q15361 905 aaPredicted RBP24.07■■□□□ 1.44
LTBP3-201ENST00000301873 VAT1LQ9HCJ6 419 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 ATP2B3Q16720 1220 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 LRSAM1Q6UWE0 723 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 TMC6Q7Z403 805 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 CCDC102AQ96A19 550 aa24.07■■□□□ 1.44
LTBP3-201ENST00000301873 KIF2AO00139 706 aaPredicted RBP24.06■■□□□ 1.44
LTBP3-201ENST00000301873 CDC5LQ99459 802 aaKnown RBP24.06■■□□□ 1.44
LTBP3-201ENST00000301873 TSPY2A6NKD2 308 aa24.06■■□□□ 1.44
LTBP3-201ENST00000301873 ZSCAN12O43309 604 aa24.06■■□□□ 1.44
LTBP3-201ENST00000301873 DACT1Q9NYF0 836 aa24.06■■□□□ 1.44
LTBP3-201ENST00000301873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.06■■□□□ 1.44
LTBP3-201ENST00000301873 TMOD2Q9NZR1 351 aa24.06■■□□□ 1.44
LTBP3-201ENST00000301873 RIMS2Q9UQ26 1411 aa24.05■■□□□ 1.44
LTBP3-201ENST00000301873 PRKCSHP14314 528 aaPredicted RBP24.05■■□□□ 1.44
LTBP3-201ENST00000301873 TMX1Q9H3N1 280 aa24.05■■□□□ 1.44
LTBP3-201ENST00000301873 FLT4P35916 1363 aa24.05■■□□□ 1.44
LTBP3-201ENST00000301873 EIF3JO75822 258 aaKnown RBP24.04■■□□□ 1.44
LTBP3-201ENST00000301873 IDEP14735 1019 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 TCOF1Q13428 1488 aaKnown RBP24.04■■□□□ 1.44
LTBP3-201ENST00000301873 MCMDC2Q4G0Z9 681 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 ZNF219Q9P2Y4 722 aaPredicted RBP24.04■■□□□ 1.44
LTBP3-201ENST00000301873 GCP02774 474 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 NMIQ13287 307 aaPredicted RBP24.04■■□□□ 1.44
LTBP3-201ENST00000301873 CCDC96Q2M329 555 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 TMCO3Q6UWJ1 677 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 CHST3Q7LGC8 479 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 NPATQ14207 1427 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 SF3B2Q13435 895 aaKnown RBP24.04■■□□□ 1.44
LTBP3-201ENST00000301873 STX1AQ16623 288 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 CCDC102BQ68D86 513 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 ZSCAN16Q9H4T2 348 aaPredicted RBP24.04■■□□□ 1.44
LTBP3-201ENST00000301873 STX8Q9UNK0 236 aa24.04■■□□□ 1.44
LTBP3-201ENST00000301873 PRIM1P49642 420 aaKnown RBP24.03■■□□□ 1.44
LTBP3-201ENST00000301873 HSP90AA4PQ58FG1 418 aa24.03■■□□□ 1.44
LTBP3-201ENST00000301873 Q6ZUG5 572 aa24.03■■□□□ 1.44
LTBP3-201ENST00000301873 GOLGA6L10A6NI86 522 aa24.03■■□□□ 1.44
LTBP3-201ENST00000301873 CBX1P83916 185 aa24.03■■□□□ 1.44
LTBP3-201ENST00000301873 KCNA6P17658 529 aa24.03■■□□□ 1.44
LTBP3-201ENST00000301873 SLC9C2Q5TAH2 1124 aa24.03■■□□□ 1.44
LTBP3-201ENST00000301873 ERLIN2O94905 339 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 CPA1P15085 419 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 DNA2P51530 1060 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 UBA5Q9GZZ9 404 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 RDXP35241 583 aaKnown RBP24.02■■□□□ 1.44
LTBP3-201ENST00000301873 AK2P54819 239 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 TXLNBQ8N3L3 684 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 CHMLP26374 656 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 UBA7P41226 1012 aa24.02■■□□□ 1.44
LTBP3-201ENST00000301873 IL15P40933 162 aaPredicted RBP24.02■■□□□ 1.44
LTBP3-201ENST00000301873 CACNA2D4Q7Z3S7 1137 aa24.01■■□□□ 1.43
LTBP3-201ENST00000301873 ZNF397Q8NF99 534 aaPredicted RBP24.01■■□□□ 1.43
LTBP3-201ENST00000301873 PZPP20742 1482 aa24.01■■□□□ 1.43
LTBP3-201ENST00000301873 NEFHP12036 1026 aa24.01■■□□□ 1.43
LTBP3-201ENST00000301873 KIF5CO60282 957 aa24.01■■□□□ 1.43
LTBP3-201ENST00000301873 ERICH4A6NGS2 130 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 ZBTB43O43298 467 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 SPA17Q15506 151 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 TRMT1LQ7Z2T5 733 aaKnown RBP24■■□□□ 1.43
LTBP3-201ENST00000301873 HELBQ8NG08 1087 aaPredicted RBP24■■□□□ 1.43
LTBP3-201ENST00000301873 F13A1P00488 732 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 RPGRQ92834 1020 aaKnown RBP24■■□□□ 1.43
LTBP3-201ENST00000301873 NUP88Q99567 741 aaPredicted RBP24■■□□□ 1.43
LTBP3-201ENST00000301873 USP26Q9BXU7 913 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 SOS1Q07889 1333 aaPredicted RBP24■■□□□ 1.43
LTBP3-201ENST00000301873 TAF3Q5VWG9 929 aa24■■□□□ 1.43
LTBP3-201ENST00000301873 ZFYP08048 801 aaPredicted RBP23.99■■□□□ 1.43
LTBP3-201ENST00000301873 ALG1Q9BT22 464 aa23.99■■□□□ 1.43
LTBP3-201ENST00000301873 SYKP43405 635 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms