RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ANKRD1Q15327 319 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 MNS1Q8NEH6 495 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 SSH3Q8TE77 659 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 NEURL4Q96JN8 1562 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 CLSTN2Q9H4D0 955 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 INO80Q9ULG1 1556 aaPredicted RBP13.42□□□□□ -0.26
TRUB1-201ENST00000298746 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 CCAR2Q8N163 923 aaKnown RBP13.41□□□□□ -0.26
TRUB1-201ENST00000298746 NOL10Q9BSC4 688 aaKnown RBP13.41□□□□□ -0.26
TRUB1-201ENST00000298746 ARHGEF28Q8N1W1 1705 aaKnown RBP13.41□□□□□ -0.26
TRUB1-201ENST00000298746 MROH1Q8NDA8 1641 aa13.41□□□□□ -0.26
TRUB1-201ENST00000298746 SLU7O95391 586 aaKnown RBP13.41□□□□□ -0.26
TRUB1-201ENST00000298746 BRF1Q92994 677 aa13.41□□□□□ -0.26
TRUB1-201ENST00000298746 LRRC8AQ8IWT6 810 aa13.41□□□□□ -0.26
TRUB1-201ENST00000298746 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
TRUB1-201ENST00000298746 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
TRUB1-201ENST00000298746 JAK2O60674 1132 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 NMIQ13287 307 aaPredicted RBP13.4□□□□□ -0.26
TRUB1-201ENST00000298746 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.26
TRUB1-201ENST00000298746 KMT5BQ4FZB7 885 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 ST7Q9NRC1 585 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 AOX1Q06278 1338 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 AIMP1Q12904 312 aaKnown RBP13.4□□□□□ -0.26
TRUB1-201ENST00000298746 TERF2Q15554 542 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
TRUB1-201ENST00000298746 CEP57L1Q8IYX8 460 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 ACEP12821 1306 aa13.4□□□□□ -0.26
TRUB1-201ENST00000298746 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 FBXO38Q6PIJ6 1188 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
TRUB1-201ENST00000298746 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 ZBTB9Q96C00 473 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 PTPRMP28827 1452 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
TRUB1-201ENST00000298746 ERCC6LQ2NKX8 1250 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 TEX35Q5T0J7 233 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 CALCOCO1Q9P1Z2 691 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 NLRP6P59044 892 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 STX1AQ16623 288 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 EVI5LQ96CN4 794 aa13.39□□□□□ -0.27
TRUB1-201ENST00000298746 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
TRUB1-201ENST00000298746 BIN1O00499 593 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 EPB41L2O43491 1005 aaKnown RBP13.38□□□□□ -0.27
TRUB1-201ENST00000298746 NEMFO60524 1076 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 TEFQ10587 303 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 TMC6Q7Z403 805 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
TRUB1-201ENST00000298746 UBXN4Q92575 508 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 ERO1AQ96HE7 468 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 EYA1Q99502 592 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
TRUB1-201ENST00000298746 TPM4P67936 248 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 PDE4CQ08493 712 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
TRUB1-201ENST00000298746 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 SFPQP23246 707 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRUB1-201ENST00000298746 C11orf57Q6ZUT1 292 aaPredicted RBP13.38□□□□□ -0.27
TRUB1-201ENST00000298746 ANO10Q9NW15 660 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
TRUB1-201ENST00000298746 SLC27A2O14975 620 aa13.37□□□□□ -0.27
TRUB1-201ENST00000298746 ISM2Q6H9L7 571 aa13.37□□□□□ -0.27
TRUB1-201ENST00000298746 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
TRUB1-201ENST00000298746 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
TRUB1-201ENST00000298746 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
TRUB1-201ENST00000298746 DNAJC2Q99543 621 aaKnown RBP13.37□□□□□ -0.27
TRUB1-201ENST00000298746 HIP1O00291 1037 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 URI1O94763 535 aaPredicted RBP13.36□□□□□ -0.27
TRUB1-201ENST00000298746 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
TRUB1-201ENST00000298746 TMCO3Q6UWJ1 677 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
TRUB1-201ENST00000298746 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
TRUB1-201ENST00000298746 SYCP1Q15431 976 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 FTOQ9C0B1 505 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRUB1-201ENST00000298746 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
TRUB1-201ENST00000298746 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
TRUB1-201ENST00000298746 TTC41PQ6P2S7 1318 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 DNAI1Q9UI46 699 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 LMTK2Q8IWU2 1503 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 ELP1O95163 1332 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 CAVIN2O95810 425 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 ERC1Q8IUD2 1116 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 ARAP3Q8WWN8 1544 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 ATP7BP35670 1465 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
TRUB1-201ENST00000298746 KIF2AO00139 706 aaPredicted RBP13.34□□□□□ -0.27
TRUB1-201ENST00000298746 RPS6KB1P23443 525 aa13.34□□□□□ -0.27
TRUB1-201ENST00000298746 Q6ZUG5 572 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms