RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ABCA3Q99758 1704 aa18.64■□□□□ 0.58
UBAP1-201ENST00000297661 SGSM2O43147 1006 aa18.64■□□□□ 0.57
UBAP1-201ENST00000297661 GTF2E1P29083 439 aaPredicted RBP18.64■□□□□ 0.57
UBAP1-201ENST00000297661 SNX14Q9Y5W7 946 aa18.64■□□□□ 0.57
UBAP1-201ENST00000297661 SPATA31A6Q5VVP1 1343 aa18.64■□□□□ 0.57
UBAP1-201ENST00000297661 LTN1O94822 1766 aa18.64■□□□□ 0.57
UBAP1-201ENST00000297661 PHF14O94880 888 aa18.64■□□□□ 0.57
UBAP1-201ENST00000297661 AIMP1Q12904 312 aaKnown RBP18.64■□□□□ 0.57
UBAP1-201ENST00000297661 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
UBAP1-201ENST00000297661 ADCY5O95622 1261 aa18.63■□□□□ 0.57
UBAP1-201ENST00000297661 UVSSAQ2YD98 709 aa18.63■□□□□ 0.57
UBAP1-201ENST00000297661 FAM184AQ8NB25 1140 aa18.63■□□□□ 0.57
UBAP1-201ENST00000297661 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
UBAP1-201ENST00000297661 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
UBAP1-201ENST00000297661 NFAT5O94916 1531 aa18.63■□□□□ 0.57
UBAP1-201ENST00000297661 IGSF3O75054 1194 aa18.63■□□□□ 0.57
UBAP1-201ENST00000297661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.63■□□□□ 0.57
UBAP1-201ENST00000297661 PXDNLA1KZ92 1463 aa18.62■□□□□ 0.57
UBAP1-201ENST00000297661 U2AF2P26368 475 aaKnown RBP eCLIP18.62■□□□□ 0.574e-8■□□□□ 9.6
UBAP1-201ENST00000297661 CNTROBQ8N137 903 aa18.62■□□□□ 0.57
UBAP1-201ENST00000297661 LSG1Q9H089 658 aaKnown RBP18.62■□□□□ 0.57
UBAP1-201ENST00000297661 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
UBAP1-201ENST00000297661 RGPD2P0DJD1 1756 aa18.62■□□□□ 0.57
UBAP1-201ENST00000297661 RGPD5Q99666 1765 aa18.62■□□□□ 0.57
UBAP1-201ENST00000297661 AK2P54819 239 aa18.62■□□□□ 0.57
UBAP1-201ENST00000297661 RAD50Q92878 1312 aa18.62■□□□□ 0.57
UBAP1-201ENST00000297661 SLIT3O75094 1523 aa18.61■□□□□ 0.57
UBAP1-201ENST00000297661 CSB-PGBD3P0DP91 1061 aa18.61■□□□□ 0.57
UBAP1-201ENST00000297661 AOX1Q06278 1338 aa18.61■□□□□ 0.57
UBAP1-201ENST00000297661 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
UBAP1-201ENST00000297661 COL22A1Q8NFW1 1626 aaPredicted RBP18.61■□□□□ 0.57
UBAP1-201ENST00000297661 AFF2P51816 1311 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 EVA1CP58658 441 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 PTH1RQ03431 593 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 LARGE1O95461 756 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 RUFY3Q7L099 469 aa18.6■□□□□ 0.57
UBAP1-201ENST00000297661 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
UBAP1-201ENST00000297661 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
UBAP1-201ENST00000297661 PLEKHO1Q53GL0 409 aaPredicted RBP18.59■□□□□ 0.57
UBAP1-201ENST00000297661 LARP1Q6PKG0 1096 aaKnown RBP18.59■□□□□ 0.57
UBAP1-201ENST00000297661 DIAPH3Q9NSV4 1193 aa18.59■□□□□ 0.57
UBAP1-201ENST00000297661 RIOK3O14730 519 aaKnown RBP18.59■□□□□ 0.57
UBAP1-201ENST00000297661 SIL1Q9H173 461 aa18.59■□□□□ 0.57
UBAP1-201ENST00000297661 DBF4Q9UBU7 674 aaPredicted RBP18.59■□□□□ 0.57
UBAP1-201ENST00000297661 EP400Q96L91 3159 aa18.59■□□□□ 0.57
UBAP1-201ENST00000297661 ADCK5Q3MIX3 580 aa18.58■□□□□ 0.57
UBAP1-201ENST00000297661 ANKRD7Q92527 254 aa18.58■□□□□ 0.57
UBAP1-201ENST00000297661 USP21Q9UK80 565 aa18.58■□□□□ 0.57
UBAP1-201ENST00000297661 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.57
UBAP1-201ENST00000297661 CAMTA1Q9Y6Y1 1673 aa18.58■□□□□ 0.57
UBAP1-201ENST00000297661 PDE4CQ08493 712 aa18.58■□□□□ 0.56
UBAP1-201ENST00000297661 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
UBAP1-201ENST00000297661 PRPF40BQ6NWY9 871 aaKnown RBP18.58■□□□□ 0.56
UBAP1-201ENST00000297661 CLASRPQ8N2M8 674 aaKnown RBP18.58■□□□□ 0.56
UBAP1-201ENST00000297661 KLHDC4Q8TBB5 520 aa18.58■□□□□ 0.56
UBAP1-201ENST00000297661 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.56
UBAP1-201ENST00000297661 GIGYF1O75420 1035 aaPredicted RBP18.58■□□□□ 0.56
UBAP1-201ENST00000297661 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
UBAP1-201ENST00000297661 SLC39A6Q13433 755 aa18.58■□□□□ 0.56
UBAP1-201ENST00000297661 AACSQ86V21 672 aa18.58■□□□□ 0.56
UBAP1-201ENST00000297661 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.56
UBAP1-201ENST00000297661 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
UBAP1-201ENST00000297661 CCDC8Q9H0W5 538 aaPredicted RBP18.57■□□□□ 0.56
UBAP1-201ENST00000297661 IFIT2P09913 472 aaKnown RBP18.57■□□□□ 0.56
UBAP1-201ENST00000297661 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
UBAP1-201ENST00000297661 TTC14Q96N46 770 aa18.57■□□□□ 0.56
UBAP1-201ENST00000297661 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
UBAP1-201ENST00000297661 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
UBAP1-201ENST00000297661 TCHHQ07283 1943 aa18.56■□□□□ 0.56
UBAP1-201ENST00000297661 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
UBAP1-201ENST00000297661 TOM1L2Q6ZVM7 507 aa18.56■□□□□ 0.56
UBAP1-201ENST00000297661 CCDC83Q8IWF9 413 aa18.56■□□□□ 0.56
UBAP1-201ENST00000297661 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
UBAP1-201ENST00000297661 JAKMIP1Q96N16 626 aaKnown RBP18.56■□□□□ 0.56
UBAP1-201ENST00000297661 TLR7Q9NYK1 1049 aaKnown RBP18.56■□□□□ 0.56
UBAP1-201ENST00000297661 TAF3Q5VWG9 929 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 KIAA1524Q8TCG1 905 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 TMEM51Q9NW97 253 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 HOXB7P09629 217 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 MYL6BP14649 208 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 ZNF771Q7L3S4 317 aaPredicted RBP18.55■□□□□ 0.56
UBAP1-201ENST00000297661 ECHDC1Q9NTX5 307 aa18.55■□□□□ 0.56
UBAP1-201ENST00000297661 SYT1P21579 422 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 PLCB2Q00722 1185 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 HSP90AB4PQ58FF6 505 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
UBAP1-201ENST00000297661 CGNQ9P2M7 1197 aaKnown RBP18.54■□□□□ 0.56
UBAP1-201ENST00000297661 CPDO75976 1380 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 N4BP2Q86UW6 1770 aaPredicted RBP18.54■□□□□ 0.56
UBAP1-201ENST00000297661 FIBPO43427 364 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 KAZALD1Q96I82 304 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 FEZ1Q99689 392 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 RGS17Q9UGC6 210 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms