RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 CCDC82Q8N4S0 544 aa18.61■□□□□ 0.57
ARHGEF28-201ENST00000296794 KIF5CO60282 957 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 NOLC1Q14978 699 aaKnown RBP eCLIP18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 ZGPATQ8N5A5 531 aaKnown RBP18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 KIAA0754O94854 1291 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 C8orf37Q96NL8 207 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 SSBP05455 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 CEP85Q6P2H3 762 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 CCDC148Q8NFR7 591 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 CCDC196A0A1B0GTZ2 297 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 GBP3Q9H0R5 595 aa18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 CWC25Q9NXE8 425 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF28-201ENST00000296794 MINDY4BA8MYZ0 360 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 ERLIN2O94905 339 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 KIF4BQ2VIQ3 1234 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 SYCP1Q15431 976 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 DDB1Q16531 1140 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 SLC12A7Q9Y666 1083 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 UHRF1BP1Q6BDS2 1440 aa18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF28-201ENST00000296794 CCDC191Q8NCU4 936 aa18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 CENPHQ9H3R5 247 aa18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 BMP2KQ9NSY1 1161 aaPredicted RBP18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 F13A1P00488 732 aa18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 ZNF76P36508 570 aa18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 TAF3Q5VWG9 929 aa18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.57
ARHGEF28-201ENST00000296794 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.56
ARHGEF28-201ENST00000296794 BRF1Q92994 677 aa18.58■□□□□ 0.56
ARHGEF28-201ENST00000296794 FAM200AQ8TCP9 573 aa18.58■□□□□ 0.56
ARHGEF28-201ENST00000296794 RBM8AQ9Y5S9 174 aaKnown RBP18.58■□□□□ 0.56
ARHGEF28-201ENST00000296794 SPDYE4A6NLX3 237 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 SNW1Q13573 536 aaKnown RBP18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 CEP135Q66GS9 1140 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 UBE3BQ7Z3V4 1068 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 WDR62O43379 1518 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 CHPF2Q9P2E5 772 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 DNM1Q05193 864 aaKnown RBP18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 LRRC59Q96AG4 307 aaKnown RBP18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
ARHGEF28-201ENST00000296794 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 LDHCP07864 332 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 TTC12Q9H892 705 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 IFIT3O14879 490 aaKnown RBP18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 HAND2P61296 217 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 CRACR2AQ9BSW2 395 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 USP26Q9BXU7 913 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 SNRKQ9NRH2 765 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 CCDC186Q7Z3E2 898 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 PAXBP1Q9Y5B6 917 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 KRT24Q2M2I5 525 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 TMX1Q9H3N1 280 aa18.56■□□□□ 0.56
ARHGEF28-201ENST00000296794 DACT1Q9NYF0 836 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 UNC13AQ9UPW8 1703 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZNF397Q8NF99 534 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 POLR3GO15318 223 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 HS1BP3Q53T59 392 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 ISM2Q6H9L7 571 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 JAKMIP3Q5VZ66 844 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 RAB11FIP4Q86YS3 637 aa18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZNF622Q969S3 477 aaKnown RBP eCLIP18.55■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 IQCA1Q86XH1 822 aa18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 SHANK2Q9UPX8 1470 aa18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 PPIP5K1Q6PFW1 1433 aa18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 JARID2Q92833 1246 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 LRRC2Q9BYS8 371 aa18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 PHAXQ9H814 394 aaKnown RBP18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
ARHGEF28-201ENST00000296794 TTLL12Q14166 644 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 ST5P78524 1137 aa18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 CCDC150Q8NCX0 1101 aa18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 SPA17Q15506 151 aa18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 RNF41Q9H4P4 317 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms