RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SBF2Q86WG5 1849 aa19.16■□□□□ 0.66
LSM6-201ENST00000296581 CRKLP46109 303 aaKnown RBP19.16■□□□□ 0.66
LSM6-201ENST00000296581 ERVV-1B6SEH8 477 aa19.16■□□□□ 0.66
LSM6-201ENST00000296581 ERC1Q8IUD2 1116 aa19.16■□□□□ 0.66
LSM6-201ENST00000296581 MX1P20591 662 aa19.15■□□□□ 0.66
LSM6-201ENST00000296581 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
LSM6-201ENST00000296581 PA2G4Q9UQ80 394 aaKnown RBP19.15■□□□□ 0.66
LSM6-201ENST00000296581 AOX1Q06278 1338 aa19.14■□□□□ 0.66
LSM6-201ENST00000296581 IL1RAPL2Q9NP60 686 aa19.14■□□□□ 0.66
LSM6-201ENST00000296581 RFX5P48382 616 aaPredicted RBP19.14■□□□□ 0.65
LSM6-201ENST00000296581 FOXO4P98177 505 aa19.14■□□□□ 0.65
LSM6-201ENST00000296581 HLFQ16534 295 aa19.14■□□□□ 0.65
LSM6-201ENST00000296581 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.65
LSM6-201ENST00000296581 IPO9Q96P70 1041 aaKnown RBP19.14■□□□□ 0.65
LSM6-201ENST00000296581 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
LSM6-201ENST00000296581 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
LSM6-201ENST00000296581 UPF2Q9HAU5 1272 aaKnown RBP19.13■□□□□ 0.65
LSM6-201ENST00000296581 COPRSQ9NQ92 184 aa19.13■□□□□ 0.65
LSM6-201ENST00000296581 CDC45O75419 566 aa19.13■□□□□ 0.65
LSM6-201ENST00000296581 OS9Q13438 667 aaPredicted RBP19.13■□□□□ 0.65
LSM6-201ENST00000296581 PTF1AQ7RTS3 328 aa19.13■□□□□ 0.65
LSM6-201ENST00000296581 PCCAP05165 728 aaPredicted RBP19.12■□□□□ 0.65
LSM6-201ENST00000296581 TBC1D9Q6ZT07 1266 aa19.12■□□□□ 0.65
LSM6-201ENST00000296581 ARXQ96QS3 562 aa19.12■□□□□ 0.65
LSM6-201ENST00000296581 SDSP20132 328 aa19.11■□□□□ 0.65
LSM6-201ENST00000296581 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.65
LSM6-201ENST00000296581 LMBR1LQ6UX01 489 aa19.11■□□□□ 0.65
LSM6-201ENST00000296581 NLRP10Q86W26 655 aa19.11■□□□□ 0.65
LSM6-201ENST00000296581 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
LSM6-201ENST00000296581 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
LSM6-201ENST00000296581 LY75O60449 1722 aa19.1■□□□□ 0.65
LSM6-201ENST00000296581 USP42Q9H9J4 1324 aaKnown RBP19.1■□□□□ 0.65
LSM6-201ENST00000296581 SASH1O94885 1247 aa19.1■□□□□ 0.65
LSM6-201ENST00000296581 PTPN12Q05209 780 aaKnown RBP19.1■□□□□ 0.65
LSM6-201ENST00000296581 FAM182BQ5T319 152 aa19.1■□□□□ 0.65
LSM6-201ENST00000296581 CLASRPQ8N2M8 674 aaKnown RBP19.1■□□□□ 0.65
LSM6-201ENST00000296581 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
LSM6-201ENST00000296581 ZBTB38Q8NAP3 1195 aaPredicted RBP19.09■□□□□ 0.65
LSM6-201ENST00000296581 LINC00116Q8NCU8 138 aa19.09■□□□□ 0.65
LSM6-201ENST00000296581 PLA2G12BQ9BX93 195 aa19.09■□□□□ 0.65
LSM6-201ENST00000296581 CDHR2Q9BYE9 1310 aa19.09■□□□□ 0.65
LSM6-201ENST00000296581 CNTNAP4Q9C0A0 1308 aa19.09■□□□□ 0.65
LSM6-201ENST00000296581 MFAP1P55081 439 aaKnown RBP19.08■□□□□ 0.65
LSM6-201ENST00000296581 ZNF34Q8IZ26 560 aa19.08■□□□□ 0.65
LSM6-201ENST00000296581 KLHDC4Q8TBB5 520 aa19.08■□□□□ 0.65
LSM6-201ENST00000296581 DDRGK1Q96HY6 314 aa19.08■□□□□ 0.65
LSM6-201ENST00000296581 BCORQ6W2J9 1755 aa19.08■□□□□ 0.65
LSM6-201ENST00000296581 TSHZ3Q63HK5 1081 aa19.08■□□□□ 0.64
LSM6-201ENST00000296581 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
LSM6-201ENST00000296581 TTC41PQ6P2S7 1318 aa19.07■□□□□ 0.64
LSM6-201ENST00000296581 CAMTA2O94983 1202 aa19.07■□□□□ 0.64
LSM6-201ENST00000296581 GPTP24298 496 aa19.07■□□□□ 0.64
LSM6-201ENST00000296581 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
LSM6-201ENST00000296581 SIL1Q9H173 461 aa19.07■□□□□ 0.64
LSM6-201ENST00000296581 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
LSM6-201ENST00000296581 TAF1LQ8IZX4 1826 aa19.06■□□□□ 0.64
LSM6-201ENST00000296581 RC3H1Q5TC82 1133 aaKnown RBP19.05■□□□□ 0.64
LSM6-201ENST00000296581 C22orf23Q9BZE7 217 aa19.05■□□□□ 0.64
LSM6-201ENST00000296581 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.05■□□□□ 0.64
LSM6-201ENST00000296581 UBN2Q6ZU65 1347 aa19.05■□□□□ 0.64
LSM6-201ENST00000296581 MYH3P11055 1940 aa19.05■□□□□ 0.64
LSM6-201ENST00000296581 CSF1RP07333 972 aa19.04■□□□□ 0.64
LSM6-201ENST00000296581 EAF2Q96CJ1 260 aaPredicted RBP19.04■□□□□ 0.64
LSM6-201ENST00000296581 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
LSM6-201ENST00000296581 AACSQ86V21 672 aa19.03■□□□□ 0.64
LSM6-201ENST00000296581 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
LSM6-201ENST00000296581 CHMP3Q9Y3E7 222 aa19.03■□□□□ 0.64
LSM6-201ENST00000296581 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
LSM6-201ENST00000296581 RGL2O15211 777 aa19.03■□□□□ 0.64
LSM6-201ENST00000296581 CASC1Q6TDU7 716 aa19.03■□□□□ 0.64
LSM6-201ENST00000296581 CCNL1Q9UK58 526 aaPredicted RBP19.03■□□□□ 0.64
LSM6-201ENST00000296581 RBM25P49756 843 aaKnown RBP19.02■□□□□ 0.64
LSM6-201ENST00000296581 KCNQ4P56696 695 aa19.02■□□□□ 0.64
LSM6-201ENST00000296581 ECHDC1Q9NTX5 307 aa19.02■□□□□ 0.64
LSM6-201ENST00000296581 SCN7AQ01118 1682 aa19.02■□□□□ 0.64
LSM6-201ENST00000296581 GLRX3O76003 335 aaKnown RBP19.02■□□□□ 0.63
LSM6-201ENST00000296581 ZNF772Q68DY9 489 aaPredicted RBP19.02■□□□□ 0.63
LSM6-201ENST00000296581 GPATCH3Q96I76 525 aa19.02■□□□□ 0.63
LSM6-201ENST00000296581 TRMT112Q9UI30 125 aaKnown RBP19.02■□□□□ 0.63
LSM6-201ENST00000296581 ERC2O15083 957 aa19.01■□□□□ 0.63
LSM6-201ENST00000296581 PARP10Q53GL7 1025 aa19.01■□□□□ 0.63
LSM6-201ENST00000296581 ATG9AQ7Z3C6 839 aa19.01■□□□□ 0.63
LSM6-201ENST00000296581 KRT27Q7Z3Y8 459 aa19.01■□□□□ 0.63
LSM6-201ENST00000296581 SYNE4Q8N205 404 aa19.01■□□□□ 0.63
LSM6-201ENST00000296581 RPS6KA4O75676 772 aa19■□□□□ 0.63
LSM6-201ENST00000296581 CIAO1O76071 339 aa19■□□□□ 0.63
LSM6-201ENST00000296581 CLEC4GQ6UXB4 293 aa19■□□□□ 0.63
LSM6-201ENST00000296581 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
LSM6-201ENST00000296581 IRS4O14654 1257 aaPredicted RBP19■□□□□ 0.63
LSM6-201ENST00000296581 TFCP2Q12800 502 aa19■□□□□ 0.63
LSM6-201ENST00000296581 AK7Q96M32 723 aa19■□□□□ 0.63
LSM6-201ENST00000296581 FBXO3Q9UK99 471 aa19■□□□□ 0.63
LSM6-201ENST00000296581 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
LSM6-201ENST00000296581 TRIM6-TRIM34B2RNG4 842 aa18.99■□□□□ 0.63
LSM6-201ENST00000296581 EYA2O00167 538 aa18.99■□□□□ 0.63
LSM6-201ENST00000296581 IL15P40933 162 aaPredicted RBP18.99■□□□□ 0.63
LSM6-201ENST00000296581 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
LSM6-201ENST00000296581 SUSD4Q5VX71 490 aa18.99■□□□□ 0.63
LSM6-201ENST00000296581 LAMB2P55268 1798 aa18.99■□□□□ 0.63
LSM6-201ENST00000296581 CTSWP56202 376 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms