RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 WWC3Q9ULE0 1092 aa19.98■□□□□ 0.79
SHANK1-201ENST00000293441 PPM1FP49593 454 aaPredicted RBP19.97■□□□□ 0.79
SHANK1-201ENST00000293441 STX8Q9UNK0 236 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 TSPY3P0CV98 308 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 TSPY8P0CW00 308 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 PANK2Q9BZ23 570 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 KIAA0754O94854 1291 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 DDB1Q16531 1140 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 TDRD12Q587J7 1177 aaKnown RBP19.97■□□□□ 0.79
SHANK1-201ENST00000293441 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHANK1-201ENST00000293441 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 GRM1Q13255 1194 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 KIF20AO95235 890 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 IDEP14735 1019 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 DHX37Q8IY37 1157 aaKnown RBP19.97■□□□□ 0.79
SHANK1-201ENST00000293441 UQCRHLA0A096LP55 91 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 UQCRHP07919 91 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 SSFA2P28290 1259 aa19.97■□□□□ 0.79
SHANK1-201ENST00000293441 EZRP15311 586 aaKnown RBP19.96■□□□□ 0.79
SHANK1-201ENST00000293441 PICALMQ13492 652 aa19.96■□□□□ 0.79
SHANK1-201ENST00000293441 ORC3Q9UBD5 711 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-201ENST00000293441 TNNT1P13805 278 aa19.96■□□□□ 0.79
SHANK1-201ENST00000293441 SYCP3Q8IZU3 236 aa19.96■□□□□ 0.79
SHANK1-201ENST00000293441 CTNNBL1Q8WYA6 563 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-201ENST00000293441 BIN1O00499 593 aa19.96■□□□□ 0.79
SHANK1-201ENST00000293441 MTIF2P46199 727 aaKnown RBP19.96■□□□□ 0.79
SHANK1-201ENST00000293441 TCERG1LQ5VWI1 586 aa19.96■□□□□ 0.79
SHANK1-201ENST00000293441 UHRF1BP1LA0JNW5 1464 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 CASQ1P31415 396 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 AMPD3Q01432 767 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 NLRP3Q96P20 1036 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 PLCD4Q9BRC7 762 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 LRRC59Q96AG4 307 aaKnown RBP19.95■□□□□ 0.78
SHANK1-201ENST00000293441 SLC4A4Q9Y6R1 1079 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 RAPGEF6Q8TEU7 1601 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 HDAC9Q9UKV0 1011 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 TMX1Q9H3N1 280 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 FERMT2Q96AC1 680 aa19.95■□□□□ 0.78
SHANK1-201ENST00000293441 ISM2Q6H9L7 571 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 GDPD2Q9HCC8 539 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 MACROD2A1Z1Q3 448 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 USP8P40818 1118 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 CCDC40Q4G0X9 1142 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 CLEC11AQ9Y240 323 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 RPRD2Q5VT52 1461 aaKnown RBP19.94■□□□□ 0.78
SHANK1-201ENST00000293441 WTAPQ15007 396 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 TTC22Q5TAA0 569 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 KIF5CO60282 957 aa19.94■□□□□ 0.78
SHANK1-201ENST00000293441 TEX14Q8IWB6 1497 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 CTAGE5O15320 804 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 AKAP4Q5JQC9 854 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 RHPN1Q8TCX5 695 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 ATP2B3Q16720 1220 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 ZSCAN12O43309 604 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 IFIT1BQ5T764 474 aaKnown RBP19.93■□□□□ 0.78
SHANK1-201ENST00000293441 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 DRC1Q96MC2 740 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 UTP14AQ9BVJ6 771 aaKnown RBP19.93■□□□□ 0.78
SHANK1-201ENST00000293441 CLIP2Q9UDT6 1046 aa19.93■□□□□ 0.78
SHANK1-201ENST00000293441 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-201ENST00000293441 CCDC66A2RUB6 948 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 MCM5P33992 734 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 ZGPATQ8N5A5 531 aaKnown RBP19.92■□□□□ 0.78
SHANK1-201ENST00000293441 MPHOSPH6Q99547 160 aaKnown RBP19.92■□□□□ 0.78
SHANK1-201ENST00000293441 CCDC113Q9H0I3 377 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 MEIS3Q99687 375 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 GOPCQ9HD26 462 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 UBA7P41226 1012 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 IL16Q14005 1332 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 HMG20BQ9P0W2 317 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 STX6O43752 255 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 CETN1Q12798 172 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 BICD1Q96G01 975 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 MMRN2Q9H8L6 949 aa19.92■□□□□ 0.78
SHANK1-201ENST00000293441 DZIP3Q86Y13 1208 aaKnown RBP19.91■□□□□ 0.78
SHANK1-201ENST00000293441 OGFOD1Q8N543 542 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 ZRANB1Q9UGI0 708 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 PTPN14Q15678 1187 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 UBXN4Q92575 508 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 PUF60Q9UHX1 559 aaKnown RBP19.91■□□□□ 0.78
SHANK1-201ENST00000293441 LMBR1LQ6UX01 489 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 ITSN2Q9NZM3 1697 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 GRM8O00222 908 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 IL2RBP14784 551 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 KIF4BQ2VIQ3 1234 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 NAA16Q6N069 864 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-201ENST00000293441 LRRC2Q9BYS8 371 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 KRT23Q9C075 422 aa19.91■□□□□ 0.78
SHANK1-201ENST00000293441 KLF18A0A0U1RQI7 1052 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 GOLGA6L7A0A1B0GV03 622 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 STXBP4Q6ZWJ1 553 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 ZNF804AQ7Z570 1209 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 YEATS4O95619 227 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 A2MP01023 1474 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 DUOX2Q9NRD8 1548 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms