RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 FGFR1OPO95684 399 aaKnown RBP20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 NF2P35240 595 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 CCDC91Q7Z6B0 441 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 ANKRD44Q8N8A2 993 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 A6NNZ2 444 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 TUBB8Q3ZCM7 444 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 SPATA31E1Q6ZUB1 1445 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 FSIP1Q8NA03 581 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 PLCD4Q9BRC7 762 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 BOLA2Q9H3K6 86 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 PPIP5K1Q6PFW1 1433 aa20.21■□□□□ 0.83
PCDHA13-201ENST00000289272 CCDC186Q7Z3E2 898 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 GCOM1H8Y6P7 765 aaPredicted RBP20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 MYZAPP0CAP1 466 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 SKIDA1Q1XH10 827 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 CKAP2LQ8IYA6 745 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 GOLGA1Q92805 767 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 MPRIPQ6WCQ1 1025 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 ALS2CR12Q96Q35 445 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 FKBP15Q5T1M5 1219 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 ABCC2Q92887 1545 aa20.2■□□□□ 0.82
PCDHA13-201ENST00000289272 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 OPA1O60313 960 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 PPP1R9BQ96SB3 815 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 FERMT3Q86UX7 667 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 SPINK5Q9NQ38 1064 aaPredicted RBP20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 A0A1B0GUL7 405 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 SPECC1LQ69YQ0 1117 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 ECHDC1Q9NTX5 307 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 EZRP15311 586 aaKnown RBP20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 GPATCH11Q8N954 259 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
PCDHA13-201ENST00000289272 UTP14CQ5TAP6 766 aaKnown RBP20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 MEIS3Q99687 375 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 MYD88Q99836 296 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 SDSP20132 328 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 MAP2K1Q02750 393 aaPredicted RBP20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 ENOX2Q16206 610 aaKnown RBP20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 CCDC196A0A1B0GTZ2 297 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 FOXO3O43524 673 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 CTAGE1Q96RT6 745 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 F13A1P00488 732 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 NBPF11Q86T75 865 aa20.18■□□□□ 0.82
PCDHA13-201ENST00000289272 MSH6P52701 1360 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 GNG11P61952 73 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 ZBTB40Q9NUA8 1239 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 A0A1W2PP64 1363 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 CEBPAP49715 358 aaPredicted RBP20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 CTAGE15A4D2H0 777 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 CTAGE8P0CG41 777 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 PPP1R42Q7Z4L9 355 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 CTAGE6Q86UF2 777 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 CTAGE4Q8IX94 777 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 VAMP4O75379 141 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 ATL3Q6DD88 541 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 BMP2KQ9NSY1 1161 aaPredicted RBP20.17■□□□□ 0.82
PCDHA13-201ENST00000289272 RNF187Q5TA31 235 aaPredicted RBP20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 ZNF287Q9HBT7 754 aa20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 GOLIM4O00461 696 aa20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 CCDC12Q8WUD4 166 aaPredicted RBP20.16■□□□□ 0.82
PCDHA13-201ENST00000289272 GBP2P32456 591 aaPredicted RBP20.15■□□□□ 0.82
PCDHA13-201ENST00000289272 ANO6Q4KMQ2 910 aa20.15■□□□□ 0.82
PCDHA13-201ENST00000289272 CCDC175P0C221 793 aa20.15■□□□□ 0.82
PCDHA13-201ENST00000289272 HSF2BPO75031 334 aa20.15■□□□□ 0.82
PCDHA13-201ENST00000289272 IFIT1P09914 478 aaKnown RBP20.15■□□□□ 0.82
PCDHA13-201ENST00000289272 HSPA4P34932 840 aa20.15■□□□□ 0.82
PCDHA13-201ENST00000289272 ZPR1O75312 459 aa20.14■□□□□ 0.82
PCDHA13-201ENST00000289272 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.82
PCDHA13-201ENST00000289272 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 EXOC5O00471 708 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 KCNG4Q8TDN1 519 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 PDE1AP54750 535 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 CNNM3Q8NE01 707 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 PI4KAP2A4QPH2 592 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 PI4KAP1Q8N8J0 262 aa20.14■□□□□ 0.81
PCDHA13-201ENST00000289272 NEFHP12036 1026 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 MAP3K2Q9Y2U5 619 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 ABCC1P33527 1531 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 SPAG1Q07617 926 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 FAM114A1Q8IWE2 563 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 EBAG9O00559 213 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 TYRO3Q06418 890 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 VPS36Q86VN1 386 aa20.13■□□□□ 0.81
PCDHA13-201ENST00000289272 TTC12Q9H892 705 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms