RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 C16orf45Q96MC5 204 aaPredicted RBP15.07■□□□□ 0
SMARCA5-201ENST00000283131 SRRTQ9BXP5 876 aaKnown RBP15.07■□□□□ 0
SMARCA5-201ENST00000283131 CABP5Q9NP86 173 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 EXOC1Q9NV70 894 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 SNW1Q13573 536 aaKnown RBP15.07■□□□□ 0
SMARCA5-201ENST00000283131 CIB2O75838 187 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 BTBD11A6QL63 1104 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 PRKAR2BP31323 418 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 PPFIBP2Q8ND30 876 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
SMARCA5-201ENST00000283131 PRR16Q569H4 304 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 CCDC129Q6ZRS4 1044 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 TMC6Q7Z403 805 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 ERMNQ8TAM6 284 aa15.07■□□□□ 0
SMARCA5-201ENST00000283131 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.07■□□□□ 0
SMARCA5-201ENST00000283131 AKR1B10O60218 316 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 TTF1Q15361 905 aaPredicted RBP15.06■□□□□ 0
SMARCA5-201ENST00000283131 ZNF213O14771 459 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 SETDB1Q15047 1291 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 PROSER2Q86WR7 435 aaPredicted RBP15.06■□□□□ 0
SMARCA5-201ENST00000283131 SEPT8Q92599 483 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 CABP2Q9NPB3 220 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.06■□□□□ 0
SMARCA5-201ENST00000283131 SELENOSQ9BQE4 189 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 CCDC50Q8IVM0 306 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 MAK16Q9BXY0 300 aaKnown RBP15.06■□□□□ 0
SMARCA5-201ENST00000283131 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 VIMP08670 466 aaKnown RBP15.06■□□□□ 0
SMARCA5-201ENST00000283131 DPH6Q7L8W6 267 aa15.06■□□□□ 0
SMARCA5-201ENST00000283131 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ 0
SMARCA5-201ENST00000283131 TMCO4Q5TGY1 634 aa15.05■□□□□ 0
SMARCA5-201ENST00000283131 SIRT1Q96EB6 747 aa15.05■□□□□ 0
SMARCA5-201ENST00000283131 ANKFY1Q9P2R3 1169 aa15.05■□□□□ 0
SMARCA5-201ENST00000283131 DACT3Q96B18 629 aaPredicted RBP15.05■□□□□ -0
SMARCA5-201ENST00000283131 IFIT3O14879 490 aaKnown RBP15.05■□□□□ -0
SMARCA5-201ENST00000283131 ATP6V1E1P36543 226 aa15.05■□□□□ -0
SMARCA5-201ENST00000283131 SEC62Q99442 399 aaKnown RBP15.05■□□□□ -0
SMARCA5-201ENST00000283131 CYLC1P35663 651 aaPredicted RBP15.05■□□□□ -0
SMARCA5-201ENST00000283131 FERMT3Q86UX7 667 aa15.05■□□□□ -0
SMARCA5-201ENST00000283131 LUC7L2Q9Y383 392 aaKnown RBP15.05■□□□□ -0
SMARCA5-201ENST00000283131 HLA-DOAP06340 250 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 GUCY1B3Q02153 619 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 GABPB2Q8TAK5 448 aaPredicted RBP15.04■□□□□ -0
SMARCA5-201ENST00000283131 GJC1P36383 396 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 CHD1LQ86WJ1 897 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 RSRC1Q96IZ7 334 aaKnown RBP15.04■□□□□ -0
SMARCA5-201ENST00000283131 SLC5A1P13866 664 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
SMARCA5-201ENST00000283131 STX1AQ16623 288 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 BCAR3O75815 825 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 AFAP1L2Q8N4X5 818 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 TRIM47Q96LD4 638 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 WDR46O15213 610 aaKnown RBP15.04■□□□□ -0
SMARCA5-201ENST00000283131 ARID4AP29374 1257 aaPredicted RBP15.04■□□□□ -0
SMARCA5-201ENST00000283131 LMBR1Q8WVP7 490 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 ARFGAP3Q9NP61 516 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 RMND1Q9NWS8 449 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 CCDC7Q96M83 1385 aa15.04■□□□□ -0
SMARCA5-201ENST00000283131 ZNF853P0CG23 659 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 LACTBP83111 547 aaPredicted RBP15.03■□□□□ -0
SMARCA5-201ENST00000283131 FLIIQ13045 1269 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 VAT1LQ9HCJ6 419 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 CPLX4Q7Z7G2 160 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 SH2B1Q9NRF2 756 aaPredicted RBP15.03■□□□□ -0
SMARCA5-201ENST00000283131 CCDC170Q8IYT3 715 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 HSPA1LP34931 641 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 TCP11L2Q8N4U5 519 aa15.03■□□□□ -0
SMARCA5-201ENST00000283131 GNG11P61952 73 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 PDE1CQ14123 709 aaPredicted RBP15.02■□□□□ -0
SMARCA5-201ENST00000283131 FSIP1Q8NA03 581 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 ZSWIM4Q9H7M6 989 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 B4DLN1 442 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 MRPL12P52815 198 aaKnown RBP15.02■□□□□ -0
SMARCA5-201ENST00000283131 TRAF1Q13077 416 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 MVPQ14764 893 aaKnown RBP15.02■□□□□ -0
SMARCA5-201ENST00000283131 CACNA2D3Q8IZS8 1091 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 GSDMBQ8TAX9 411 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 TMEM110-MUSTN1A8MSY1 372 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 MAP7Q14244 749 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 SDCCAG8Q86SQ7 713 aaPredicted RBP15.02■□□□□ -0
SMARCA5-201ENST00000283131 RSPH14Q9UHP6 348 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 USH1CQ9Y6N9 552 aa15.02■□□□□ -0
SMARCA5-201ENST00000283131 PDE3AQ14432 1141 aa15.02□□□□□ -0.01
SMARCA5-201ENST00000283131 INF2Q27J81 1249 aa15.02□□□□□ -0.01
SMARCA5-201ENST00000283131 RPGRIP1LQ68CZ1 1315 aa15.02□□□□□ -0.01
SMARCA5-201ENST00000283131 PDE4BQ07343 736 aa15.02□□□□□ -0.01
SMARCA5-201ENST00000283131 DNAJC21Q5F1R6 531 aaKnown RBP15.02□□□□□ -0.01
SMARCA5-201ENST00000283131 PRDM11Q9NQV5 511 aa15.02□□□□□ -0.01
SMARCA5-201ENST00000283131 PPP4R3BQ5MIZ7 849 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 KAT14Q9H8E8 782 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 BAG3O95817 575 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 SAMD15Q9P1V8 674 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 N4BP3O15049 544 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 ATP11AP98196 1134 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 RASA3Q14644 834 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 MICALL1Q8N3F8 863 aa15.01□□□□□ -0.01
SMARCA5-201ENST00000283131 KCNK9Q9NPC2 374 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms