RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SUCLG2Q96I99 432 aa25.82■■□□□ 1.72
YBX3-202ENST00000279550 LRRC4BQ9NT99 713 aa25.82■■□□□ 1.72
YBX3-202ENST00000279550 TUBGCP6Q96RT7 1819 aa25.81■■□□□ 1.72
YBX3-202ENST00000279550 RBM25P49756 843 aaKnown RBP25.81■■□□□ 1.72
YBX3-202ENST00000279550 GCKRQ14397 625 aa25.81■■□□□ 1.72
YBX3-202ENST00000279550 SLC27A3Q5K4L6 730 aa25.81■■□□□ 1.72
YBX3-202ENST00000279550 KAZALD1Q96I82 304 aa25.81■■□□□ 1.72
YBX3-202ENST00000279550 TAF1LQ8IZX4 1826 aa25.81■■□□□ 1.72
YBX3-202ENST00000279550 COL15A1P39059 1388 aa25.8■■□□□ 1.72
YBX3-202ENST00000279550 IL1RAPL2Q9NP60 686 aa25.8■■□□□ 1.72
YBX3-202ENST00000279550 TBC1D2BQ9UPU7 963 aa25.8■■□□□ 1.72
YBX3-202ENST00000279550 ERVV-1B6SEH8 477 aa25.8■■□□□ 1.72
YBX3-202ENST00000279550 RAB11FIP3O75154 756 aa25.8■■□□□ 1.72
YBX3-202ENST00000279550 TCIRG1Q13488 830 aa25.8■■□□□ 1.72
YBX3-202ENST00000279550 GIGYF2Q6Y7W6 1299 aaKnown RBP25.8■■□□□ 1.72
YBX3-202ENST00000279550 MX1P20591 662 aa25.79■■□□□ 1.72
YBX3-202ENST00000279550 BECN1Q14457 450 aa25.79■■□□□ 1.72
YBX3-202ENST00000279550 PLSCR1O15162 318 aa25.78■■□□□ 1.72
YBX3-202ENST00000279550 HLFQ16534 295 aa25.78■■□□□ 1.72
YBX3-202ENST00000279550 TBC1D2Q9BYX2 928 aa25.78■■□□□ 1.72
YBX3-202ENST00000279550 C4BP0C0L5 1744 aa25.78■■□□□ 1.72
YBX3-202ENST00000279550 APBA3O96018 575 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 NBR1Q14596 966 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 RHPN1Q8TCX5 695 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 STAP2Q9UGK3 403 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 AFDNP55196 1824 aaKnown RBP25.77■■□□□ 1.72
YBX3-202ENST00000279550 RPS6KA4O75676 772 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 CCDC191Q8NCU4 936 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 ISCA1Q9BUE6 129 aa25.77■■□□□ 1.72
YBX3-202ENST00000279550 GNPATO15228 680 aa25.76■■□□□ 1.71
YBX3-202ENST00000279550 BICC1Q9H694 974 aaKnown RBP25.76■■□□□ 1.71
YBX3-202ENST00000279550 CWC25Q9NXE8 425 aaPredicted RBP25.76■■□□□ 1.71
YBX3-202ENST00000279550 TRIM28Q13263 835 aaKnown RBP25.75■■□□□ 1.71
YBX3-202ENST00000279550 TXNRD1Q16881 649 aa25.75■■□□□ 1.71
YBX3-202ENST00000279550 HSP90AB3PQ58FF7 597 aa25.75■■□□□ 1.71
YBX3-202ENST00000279550 PROM2Q8N271 834 aa25.75■■□□□ 1.71
YBX3-202ENST00000279550 HDAC5Q9UQL6 1122 aa25.75■■□□□ 1.71
YBX3-202ENST00000279550 TNS1Q9HBL0 1735 aaKnown RBP25.75■■□□□ 1.71
YBX3-202ENST00000279550 A0A087WZG4 1122 aa25.74■■□□□ 1.71
YBX3-202ENST00000279550 CAMTA2O94983 1202 aa25.74■■□□□ 1.71
YBX3-202ENST00000279550 NUTM1Q86Y26 1132 aa25.74■■□□□ 1.71
YBX3-202ENST00000279550 KIF1BPQ96EK5 621 aa25.74■■□□□ 1.71
YBX3-202ENST00000279550 PA2G4Q9UQ80 394 aaKnown RBP25.74■■□□□ 1.71
YBX3-202ENST00000279550 RTCBQ9Y3I0 505 aaKnown RBP25.74■■□□□ 1.71
YBX3-202ENST00000279550 AK7Q96M32 723 aa25.73■■□□□ 1.71
YBX3-202ENST00000279550 KIF2CQ99661 725 aa25.73■■□□□ 1.71
YBX3-202ENST00000279550 EPHA10Q5JZY3 1008 aa25.72■■□□□ 1.71
YBX3-202ENST00000279550 JARID2Q92833 1246 aaPredicted RBP25.72■■□□□ 1.71
YBX3-202ENST00000279550 UBE3BQ7Z3V4 1068 aa25.71■■□□□ 1.71
YBX3-202ENST00000279550 AOX1Q06278 1338 aa25.71■■□□□ 1.71
YBX3-202ENST00000279550 NUP98P52948 1817 aa25.71■■□□□ 1.71
YBX3-202ENST00000279550 HMGB2P26583 209 aaKnown RBP25.71■■□□□ 1.71
YBX3-202ENST00000279550 HSP90AB4PQ58FF6 505 aa25.71■■□□□ 1.71
YBX3-202ENST00000279550 SMIM5Q71RC9 77 aa25.71■■□□□ 1.71
YBX3-202ENST00000279550 AMIGO3Q86WK7 504 aa25.71■■□□□ 1.71
YBX3-202ENST00000279550 CASP7P55210 303 aa25.7■■□□□ 1.7
YBX3-202ENST00000279550 ANKRD36CQ5JPF3 1778 aa25.7■■□□□ 1.7
YBX3-202ENST00000279550 H7C1W4 665 aa25.69■■□□□ 1.7
YBX3-202ENST00000279550 GPTP24298 496 aa25.69■■□□□ 1.7
YBX3-202ENST00000279550 BCORQ6W2J9 1755 aa25.69■■□□□ 1.7
YBX3-202ENST00000279550 OS9Q13438 667 aaPredicted RBP25.68■■□□□ 1.7
YBX3-202ENST00000279550 NLRP10Q86W26 655 aa25.68■■□□□ 1.7
YBX3-202ENST00000279550 ZNF34Q8IZ26 560 aa25.68■■□□□ 1.7
YBX3-202ENST00000279550 CLEC4GQ6UXB4 293 aa25.68■■□□□ 1.7
YBX3-202ENST00000279550 ZNF652Q9Y2D9 606 aa25.68■■□□□ 1.7
YBX3-202ENST00000279550 RGPD3A6NKT7 1758 aaPredicted RBP25.66■■□□□ 1.7
YBX3-202ENST00000279550 RGPD4Q7Z3J3 1758 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 RGL2O15211 777 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 PI4K2BQ8TCG2 481 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 ARHGEF1Q92888 912 aaKnown RBP25.66■■□□□ 1.7
YBX3-202ENST00000279550 USP26Q9BXU7 913 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 NARFQ9UHQ1 456 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 UBN2Q6ZU65 1347 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 SCN7AQ01118 1682 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 CASC1Q6TDU7 716 aa25.66■■□□□ 1.7
YBX3-202ENST00000279550 PHF14O94880 888 aa25.65■■□□□ 1.7
YBX3-202ENST00000279550 ADRA2BP18089 450 aa25.65■■□□□ 1.7
YBX3-202ENST00000279550 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
YBX3-202ENST00000279550 TRAPPC3LQ5T215 181 aa25.65■■□□□ 1.7
YBX3-202ENST00000279550 ZBTB38Q8NAP3 1195 aaPredicted RBP25.65■■□□□ 1.7
YBX3-202ENST00000279550 PCCAP05165 728 aaPredicted RBP25.64■■□□□ 1.7
YBX3-202ENST00000279550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.64■■□□□ 1.7
YBX3-202ENST00000279550 TRIM6-TRIM34B2RNG4 842 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 EIF5BO60841 1220 aaKnown RBP25.63■■□□□ 1.69
YBX3-202ENST00000279550 ZPR1O75312 459 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 UBR3Q6ZT12 1888 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 RILPL2Q969X0 211 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 USP42Q9H9J4 1324 aaKnown RBP25.63■■□□□ 1.69
YBX3-202ENST00000279550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.63■■□□□ 1.69
YBX3-202ENST00000279550 SASH1O94885 1247 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 RFC4P35249 363 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 USPL1Q5W0Q7 1092 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 KLHDC4Q8TBB5 520 aa25.63■■□□□ 1.69
YBX3-202ENST00000279550 SRP68Q9UHB9 627 aaKnown RBP25.63■■□□□ 1.69
YBX3-202ENST00000279550 NIP7Q9Y221 180 aaKnown RBP eCLIP25.63■■□□□ 1.69
YBX3-202ENST00000279550 ERC2O15083 957 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 SSFA2P28290 1259 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 ERC1Q8IUD2 1116 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 FAM89AQ96GI7 184 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 SLKQ9H2G2 1235 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms