RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KIAA1211Q6ZU35 1233 aa21.78■■□□□ 1.08
CAPN1-201ENST00000279247 ZGPATQ8N5A5 531 aaKnown RBP21.78■■□□□ 1.08
CAPN1-201ENST00000279247 MEX3CQ5U5Q3 659 aaKnown RBP21.78■■□□□ 1.08
CAPN1-201ENST00000279247 FOXD4L5Q5VV16 416 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-201ENST00000279247 FOXD4L4Q8WXT5 416 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-201ENST00000279247 KCPQ6ZWJ8 1503 aa21.78■■□□□ 1.08
CAPN1-201ENST00000279247 MCM4P33991 863 aa21.77■■□□□ 1.08
CAPN1-201ENST00000279247 TNPO1Q92973 898 aaKnown RBP21.77■■□□□ 1.08
CAPN1-201ENST00000279247 FAM89AQ96GI7 184 aa21.77■■□□□ 1.08
CAPN1-201ENST00000279247 NEUROD6Q96NK8 337 aa21.77■■□□□ 1.08
CAPN1-201ENST00000279247 COL22A1Q8NFW1 1626 aaPredicted RBP21.77■■□□□ 1.08
CAPN1-201ENST00000279247 SYNE4Q8N205 404 aa21.77■■□□□ 1.08
CAPN1-201ENST00000279247 JCADQ9P266 1359 aa21.77■■□□□ 1.07
CAPN1-201ENST00000279247 SGSM2O43147 1006 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 STARD3NLO95772 234 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 SSFA2P28290 1259 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 DNAJC2Q99543 621 aaKnown RBP21.76■■□□□ 1.07
CAPN1-201ENST00000279247 FSD1Q9BTV5 496 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 SHANK3Q9BYB0 1731 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 GLI3P10071 1580 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 RFX5P48382 616 aaPredicted RBP21.76■■□□□ 1.07
CAPN1-201ENST00000279247 MARCH10Q8NA82 808 aaPredicted RBP21.76■■□□□ 1.07
CAPN1-201ENST00000279247 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 SLC4A9Q96Q91 983 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 ARFGEF2Q9Y6D5 1785 aa21.76■■□□□ 1.07
CAPN1-201ENST00000279247 CASP7P55210 303 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 SPATA31A5Q5VU36 1347 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 SPATA31A7Q8IWB4 1347 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 FAM177BA6PVY3 158 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 KIF6Q6ZMV9 814 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 DBNDD2Q9BQY9 259 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 USP21Q9UK80 565 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 TBC1D2BQ9UPU7 963 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 PLEKHG2Q9H7P9 1386 aa21.75■■□□□ 1.07
CAPN1-201ENST00000279247 PKP1Q13835 747 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 DBNLQ9UJU6 430 aaKnown RBP21.74■■□□□ 1.07
CAPN1-201ENST00000279247 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 H7C1W4 665 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 KCNQ2O43526 872 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 DTNBO60941 627 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 CHGBP05060 677 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 CPA1P15085 419 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 FOXO4P98177 505 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 COPRSQ9NQ92 184 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 ZBTB1Q9Y2K1 713 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 PLCH1Q4KWH8 1693 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 HLFQ16534 295 aa21.74■■□□□ 1.07
CAPN1-201ENST00000279247 TNNI3KQ59H18 835 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 FPGT-TNNI3KV9GXZ4 949 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 LRP6O75581 1613 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 DISP2A7MBM2 1401 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 KCNJ4P48050 445 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 TIMM10P62072 90 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 PTH1RQ03431 593 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 LRRC24Q50LG9 513 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
CAPN1-201ENST00000279247 DDIT3P35638 169 aa21.72■■□□□ 1.07
CAPN1-201ENST00000279247 KCNQ4P56696 695 aa21.72■■□□□ 1.07
CAPN1-201ENST00000279247 RABL6Q3YEC7 729 aaPredicted RBP21.72■■□□□ 1.07
CAPN1-201ENST00000279247 RASEFQ8IZ41 740 aa21.72■■□□□ 1.07
CAPN1-201ENST00000279247 CCDC191Q8NCU4 936 aa21.72■■□□□ 1.07
CAPN1-201ENST00000279247 EVI5LQ96CN4 794 aa21.72■■□□□ 1.07
CAPN1-201ENST00000279247 PUS3Q9BZE2 481 aaKnown RBP21.72■■□□□ 1.07
CAPN1-201ENST00000279247 NMIQ13287 307 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-201ENST00000279247 USP42Q9H9J4 1324 aaKnown RBP21.71■■□□□ 1.07
CAPN1-201ENST00000279247 TCIRG1Q13488 830 aa21.71■■□□□ 1.07
CAPN1-201ENST00000279247 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
CAPN1-201ENST00000279247 PRPF40BQ6NWY9 871 aaKnown RBP21.7■■□□□ 1.06
CAPN1-201ENST00000279247 TMX3Q96JJ7 454 aa21.7■■□□□ 1.06
CAPN1-201ENST00000279247 LAMB4A4D0S4 1761 aa21.7■■□□□ 1.06
CAPN1-201ENST00000279247 BCL9LQ86UU0 1499 aa21.7■■□□□ 1.06
CAPN1-201ENST00000279247 TNS2Q63HR2 1409 aa21.7■■□□□ 1.06
CAPN1-201ENST00000279247 RAD50Q92878 1312 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 DDX46Q7L014 1031 aaKnown RBP21.69■■□□□ 1.06
CAPN1-201ENST00000279247 SLIT2O94813 1529 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 HSPA4P34932 840 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 RUFY2Q8WXA3 655 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 A0A0D9SFI3 127 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 TAF7LQ5H9L4 462 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 CHAMP1Q96JM3 812 aa21.69■■□□□ 1.06
CAPN1-201ENST00000279247 RAB3GAP1Q15042 981 aa21.68■■□□□ 1.06
CAPN1-201ENST00000279247 TEX13AQ9BXU3 409 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-201ENST00000279247 SNX14Q9Y5W7 946 aa21.68■■□□□ 1.06
CAPN1-201ENST00000279247 UBR2Q8IWV8 1755 aa21.67■■□□□ 1.06
CAPN1-201ENST00000279247 CYP19A1P11511 503 aaPredicted RBP21.67■■□□□ 1.06
CAPN1-201ENST00000279247 CCDC57Q2TAC2 916 aa21.67■■□□□ 1.06
CAPN1-201ENST00000279247 SLFNL1Q499Z3 407 aa21.67■■□□□ 1.06
CAPN1-201ENST00000279247 FOXD4L6Q3SYB3 417 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-201ENST00000279247 FOXD4L3Q6VB84 417 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-201ENST00000279247 BCL9O00512 1426 aa21.66■■□□□ 1.06
CAPN1-201ENST00000279247 TRAK2O60296 914 aa21.66■■□□□ 1.06
CAPN1-201ENST00000279247 CIZ1Q9ULV3 898 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-201ENST00000279247 ATG9AQ7Z3C6 839 aa21.66■■□□□ 1.06
CAPN1-201ENST00000279247 ISCA1Q9BUE6 129 aa21.66■■□□□ 1.06
CAPN1-201ENST00000279247 ITGB4P16144 1822 aa21.65■■□□□ 1.06
CAPN1-201ENST00000279247 CASTP20810 708 aaKnown RBP21.65■■□□□ 1.06
CAPN1-201ENST00000279247 AFF2P51816 1311 aa21.65■■□□□ 1.06
CAPN1-201ENST00000279247 ATP6V1AP38606 617 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms