RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 OS9Q13438 667 aaPredicted RBP24.02■■□□□ 1.44
C11orf49-201ENST00000278460 UPF2Q9HAU5 1272 aaKnown RBP24.02■■□□□ 1.44
C11orf49-201ENST00000278460 PA2G4Q9UQ80 394 aaKnown RBP24.02■■□□□ 1.44
C11orf49-201ENST00000278460 AOX1Q06278 1338 aa24.02■■□□□ 1.44
C11orf49-201ENST00000278460 MX1P20591 662 aa24.01■■□□□ 1.43
C11orf49-201ENST00000278460 FOXO4P98177 505 aa24.01■■□□□ 1.43
C11orf49-201ENST00000278460 ARXQ96QS3 562 aa24.01■■□□□ 1.43
C11orf49-201ENST00000278460 IL1RAPL2Q9NP60 686 aa24.01■■□□□ 1.43
C11orf49-201ENST00000278460 HLFQ16534 295 aa24■■□□□ 1.43
C11orf49-201ENST00000278460 COPRSQ9NQ92 184 aa24■■□□□ 1.43
C11orf49-201ENST00000278460 PCCAP05165 728 aaPredicted RBP23.99■■□□□ 1.43
C11orf49-201ENST00000278460 RFX5P48382 616 aaPredicted RBP23.99■■□□□ 1.43
C11orf49-201ENST00000278460 G3BP1Q13283 466 aaKnown RBP eCLIP23.99■■□□□ 1.43
C11orf49-201ENST00000278460 CDC45O75419 566 aa23.99■■□□□ 1.43
C11orf49-201ENST00000278460 PTF1AQ7RTS3 328 aa23.99■■□□□ 1.43
C11orf49-201ENST00000278460 TBC1D2BQ9UPU7 963 aa23.98■■□□□ 1.43
C11orf49-201ENST00000278460 CNTNAP4Q9C0A0 1308 aa23.97■■□□□ 1.43
C11orf49-201ENST00000278460 FAM182BQ5T319 152 aa23.97■■□□□ 1.43
C11orf49-201ENST00000278460 LMBR1LQ6UX01 489 aa23.97■■□□□ 1.43
C11orf49-201ENST00000278460 NLRP10Q86W26 655 aa23.97■■□□□ 1.43
C11orf49-201ENST00000278460 ZBTB38Q8NAP3 1195 aaPredicted RBP23.97■■□□□ 1.43
C11orf49-201ENST00000278460 IPO9Q96P70 1041 aaKnown RBP23.97■■□□□ 1.43
C11orf49-201ENST00000278460 TBC1D9Q6ZT07 1266 aa23.96■■□□□ 1.43
C11orf49-201ENST00000278460 CLASRPQ8N2M8 674 aaKnown RBP23.96■■□□□ 1.43
C11orf49-201ENST00000278460 PLA2G12BQ9BX93 195 aa23.96■■□□□ 1.43
C11orf49-201ENST00000278460 CDHR2Q9BYE9 1310 aa23.96■■□□□ 1.43
C11orf49-201ENST00000278460 USP42Q9H9J4 1324 aaKnown RBP23.96■■□□□ 1.43
C11orf49-201ENST00000278460 SDSP20132 328 aa23.95■■□□□ 1.43
C11orf49-201ENST00000278460 PTPN12Q05209 780 aaKnown RBP23.95■■□□□ 1.43
C11orf49-201ENST00000278460 LINC00116Q8NCU8 138 aa23.95■■□□□ 1.43
C11orf49-201ENST00000278460 EIF5BO60841 1220 aaKnown RBP23.95■■□□□ 1.42
C11orf49-201ENST00000278460 SASH1O94885 1247 aa23.95■■□□□ 1.42
C11orf49-201ENST00000278460 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
C11orf49-201ENST00000278460 ZNF34Q8IZ26 560 aa23.95■■□□□ 1.42
C11orf49-201ENST00000278460 SCN7AQ01118 1682 aa23.94■■□□□ 1.42
C11orf49-201ENST00000278460 LAMB2P55268 1798 aa23.94■■□□□ 1.42
C11orf49-201ENST00000278460 RTL5Q5HYW3 569 aaPredicted RBP23.94■■□□□ 1.42
C11orf49-201ENST00000278460 TBC1D32Q96NH3 1257 aa23.94■■□□□ 1.42
C11orf49-201ENST00000278460 GPTP24298 496 aa23.93■■□□□ 1.42
C11orf49-201ENST00000278460 RC3H1Q5TC82 1133 aaKnown RBP23.93■■□□□ 1.42
C11orf49-201ENST00000278460 DDRGK1Q96HY6 314 aa23.93■■□□□ 1.42
C11orf49-201ENST00000278460 CAMTA2O94983 1202 aa23.92■■□□□ 1.42
C11orf49-201ENST00000278460 MFAP1P55081 439 aaKnown RBP23.92■■□□□ 1.42
C11orf49-201ENST00000278460 KLHDC4Q8TBB5 520 aa23.92■■□□□ 1.42
C11orf49-201ENST00000278460 SIL1Q9H173 461 aa23.92■■□□□ 1.42
C11orf49-201ENST00000278460 TTC41PQ6P2S7 1318 aa23.92■■□□□ 1.42
C11orf49-201ENST00000278460 ZNF772Q68DY9 489 aaPredicted RBP23.92■■□□□ 1.42
C11orf49-201ENST00000278460 TSHZ3Q63HK5 1081 aa23.91■■□□□ 1.42
C11orf49-201ENST00000278460 FAM89AQ96GI7 184 aa23.91■■□□□ 1.42
C11orf49-201ENST00000278460 BCL11BQ9C0K0 894 aaPredicted RBP23.91■■□□□ 1.42
C11orf49-201ENST00000278460 PI4K2BQ8TCG2 481 aa23.9■■□□□ 1.42
C11orf49-201ENST00000278460 CHMP3Q9Y3E7 222 aa23.9■■□□□ 1.42
C11orf49-201ENST00000278460 DDX60Q8IY21 1712 aaKnown RBP23.9■■□□□ 1.42
C11orf49-201ENST00000278460 UBN2Q6ZU65 1347 aa23.9■■□□□ 1.42
C11orf49-201ENST00000278460 C4BP0C0L5 1744 aa23.89■■□□□ 1.42
C11orf49-201ENST00000278460 RGL2O15211 777 aa23.89■■□□□ 1.42
C11orf49-201ENST00000278460 CCNL1Q9UK58 526 aaPredicted RBP23.89■■□□□ 1.42
C11orf49-201ENST00000278460 CSF1RP07333 972 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 IFIT2P09913 472 aaKnown RBP23.88■■□□□ 1.41
C11orf49-201ENST00000278460 CASC1Q6TDU7 716 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 FAM196AQ6ZSG2 479 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 GPATCH3Q96I76 525 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 RBM6P78332 1123 aaKnown RBP23.88■■□□□ 1.41
C11orf49-201ENST00000278460 PARP10Q53GL7 1025 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 KRT27Q7Z3Y8 459 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 AACSQ86V21 672 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 C22orf23Q9BZE7 217 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 TRMT112Q9UI30 125 aaKnown RBP23.88■■□□□ 1.41
C11orf49-201ENST00000278460 ZNF652Q9Y2D9 606 aa23.88■■□□□ 1.41
C11orf49-201ENST00000278460 CASZ1Q86V15 1759 aa23.87■■□□□ 1.41
C11orf49-201ENST00000278460 C4AP0C0L4 1744 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 ERC2O15083 957 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 MSH5O43196 834 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 RPS6KA4O75676 772 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 GLRX3O76003 335 aaKnown RBP23.86■■□□□ 1.41
C11orf49-201ENST00000278460 KCNQ4P56696 695 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 CLEC4GQ6UXB4 293 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 EAF2Q96CJ1 260 aaPredicted RBP23.86■■□□□ 1.41
C11orf49-201ENST00000278460 ECHDC1Q9NTX5 307 aa23.86■■□□□ 1.41
C11orf49-201ENST00000278460 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.86■■□□□ 1.41
C11orf49-201ENST00000278460 AK7Q96M32 723 aa23.85■■□□□ 1.41
C11orf49-201ENST00000278460 FBXO3Q9UK99 471 aa23.85■■□□□ 1.41
C11orf49-201ENST00000278460 IRS4O14654 1257 aaPredicted RBP23.84■■□□□ 1.41
C11orf49-201ENST00000278460 CIAO1O76071 339 aa23.84■■□□□ 1.41
C11orf49-201ENST00000278460 CCDC57Q2TAC2 916 aa23.84■■□□□ 1.41
C11orf49-201ENST00000278460 TRIM6-TRIM34B2RNG4 842 aa23.84■■□□□ 1.41
C11orf49-201ENST00000278460 PDE8AO60658 829 aa23.84■■□□□ 1.41
C11orf49-201ENST00000278460 IL15P40933 162 aaPredicted RBP23.84■■□□□ 1.41
C11orf49-201ENST00000278460 SYNE4Q8N205 404 aa23.84■■□□□ 1.41
C11orf49-201ENST00000278460 COL24A1Q17RW2 1714 aa23.84■■□□□ 1.41
C11orf49-201ENST00000278460 UBR3Q6ZT12 1888 aa23.83■■□□□ 1.41
C11orf49-201ENST00000278460 EYA2O00167 538 aa23.83■■□□□ 1.41
C11orf49-201ENST00000278460 RBM25P49756 843 aaKnown RBP23.83■■□□□ 1.41
C11orf49-201ENST00000278460 CTSWP56202 376 aa23.83■■□□□ 1.41
C11orf49-201ENST00000278460 TFCP2Q12800 502 aa23.83■■□□□ 1.41
C11orf49-201ENST00000278460 SUSD4Q5VX71 490 aa23.83■■□□□ 1.41
C11orf49-201ENST00000278460 ATG9AQ7Z3C6 839 aa23.83■■□□□ 1.41
C11orf49-201ENST00000278460 TNNI3KQ59H18 835 aa23.82■■□□□ 1.4
C11orf49-201ENST00000278460 TTLL11Q8NHH1 800 aa23.82■■□□□ 1.4
C11orf49-201ENST00000278460 RILPL2Q969X0 211 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms