RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
SKP2-201ENST00000274254 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
SKP2-201ENST00000274254 USP44Q9H0E7 712 aa21.72■■□□□ 1.07
SKP2-201ENST00000274254 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
SKP2-201ENST00000274254 CARMIL3Q8ND23 1372 aa21.72■■□□□ 1.07
SKP2-201ENST00000274254 SUSD4Q5VX71 490 aa21.71■■□□□ 1.07
SKP2-201ENST00000274254 CRBNQ96SW2 442 aa21.71■■□□□ 1.07
SKP2-201ENST00000274254 UTYO14607 1347 aa21.71■■□□□ 1.07
SKP2-201ENST00000274254 GRM8O00222 908 aa21.7■■□□□ 1.07
SKP2-201ENST00000274254 ZBTB7BO15156 539 aaPredicted RBP21.7■■□□□ 1.07
SKP2-201ENST00000274254 MSL1Q68DK7 614 aa21.7■■□□□ 1.07
SKP2-201ENST00000274254 NTSR2O95665 410 aa21.7■■□□□ 1.06
SKP2-201ENST00000274254 IRX6P78412 446 aaPredicted RBP21.7■■□□□ 1.06
SKP2-201ENST00000274254 DDR1Q08345 913 aa21.7■■□□□ 1.06
SKP2-201ENST00000274254 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
SKP2-201ENST00000274254 MEIS3Q99687 375 aa21.7■■□□□ 1.06
SKP2-201ENST00000274254 H7C1W4 665 aa21.69■■□□□ 1.06
SKP2-201ENST00000274254 POLRMTO00411 1230 aaKnown RBP21.69■■□□□ 1.06
SKP2-201ENST00000274254 CASP7P55210 303 aa21.69■■□□□ 1.06
SKP2-201ENST00000274254 ZBTB38Q8NAP3 1195 aaPredicted RBP21.69■■□□□ 1.06
SKP2-201ENST00000274254 UTP14AQ9BVJ6 771 aaKnown RBP21.69■■□□□ 1.06
SKP2-201ENST00000274254 PCCAP05165 728 aaPredicted RBP21.68■■□□□ 1.06
SKP2-201ENST00000274254 NBPF7P0C2Y1 421 aaPredicted RBP21.68■■□□□ 1.06
SKP2-201ENST00000274254 MTFR1LQ9H019 292 aa21.68■■□□□ 1.06
SKP2-201ENST00000274254 C9orf78Q9NZ63 289 aaPredicted RBP21.68■■□□□ 1.06
SKP2-201ENST00000274254 TRMT112Q9UI30 125 aaKnown RBP21.68■■□□□ 1.06
SKP2-201ENST00000274254 MMP10P09238 476 aa21.67■■□□□ 1.06
SKP2-201ENST00000274254 UBE3BQ7Z3V4 1068 aa21.66■■□□□ 1.06
SKP2-201ENST00000274254 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
SKP2-201ENST00000274254 NYXQ9GZU5 481 aa21.66■■□□□ 1.06
SKP2-201ENST00000274254 ZBTB40Q9NUA8 1239 aa21.66■■□□□ 1.06
SKP2-201ENST00000274254 NRXN2Q9P2S2 1712 aa21.66■■□□□ 1.06
SKP2-201ENST00000274254 SH3TC1Q8TE82 1336 aa21.66■■□□□ 1.06
SKP2-201ENST00000274254 FAM177BA6PVY3 158 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 ZBTB7AO95365 584 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 SERPINB2P05120 415 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 GNAI3P08754 354 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 TPTE2Q6XPS3 522 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 EXOC6Q8TAG9 804 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 FAM89AQ96GI7 184 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 CHMP4BQ9H444 224 aaKnown RBP21.65■■□□□ 1.06
SKP2-201ENST00000274254 UBTFL1P0CB47 393 aaPredicted RBP21.65■■□□□ 1.06
SKP2-201ENST00000274254 SYNE4Q8N205 404 aa21.65■■□□□ 1.06
SKP2-201ENST00000274254 JARID2Q92833 1246 aaPredicted RBP21.65■■□□□ 1.06
SKP2-201ENST00000274254 CDHR2Q9BYE9 1310 aa21.64■■□□□ 1.05
SKP2-201ENST00000274254 NEFLP07196 543 aa21.64■■□□□ 1.05
SKP2-201ENST00000274254 RTL5Q5HYW3 569 aaPredicted RBP21.64■■□□□ 1.05
SKP2-201ENST00000274254 NUTM1Q86Y26 1132 aa21.64■■□□□ 1.05
SKP2-201ENST00000274254 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
SKP2-201ENST00000274254 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
SKP2-201ENST00000274254 ERFEQ4G0M1 354 aa21.62■■□□□ 1.05
SKP2-201ENST00000274254 PRR5LQ6MZQ0 368 aa21.62■■□□□ 1.05
SKP2-201ENST00000274254 KAZALD1Q96I82 304 aa21.62■■□□□ 1.05
SKP2-201ENST00000274254 ABCC12Q96J65 1359 aa21.61■■□□□ 1.05
SKP2-201ENST00000274254 IRS4O14654 1257 aaPredicted RBP21.61■■□□□ 1.05
SKP2-201ENST00000274254 AAMPQ13685 434 aa21.61■■□□□ 1.05
SKP2-201ENST00000274254 SLC10A5Q5PT55 438 aa21.61■■□□□ 1.05
SKP2-201ENST00000274254 SUCLG2Q96I99 432 aa21.61■■□□□ 1.05
SKP2-201ENST00000274254 PLA2G12BQ9BX93 195 aa21.61■■□□□ 1.05
SKP2-201ENST00000274254 ATF5Q9Y2D1 282 aaPredicted RBP21.61■■□□□ 1.05
SKP2-201ENST00000274254 GNAI2P04899 355 aa21.6■■□□□ 1.05
SKP2-201ENST00000274254 DDX60Q8IY21 1712 aaKnown RBP21.6■■□□□ 1.05
SKP2-201ENST00000274254 SGIP1Q9BQI5 828 aa21.6■■□□□ 1.05
SKP2-201ENST00000274254 HDAC5Q9UQL6 1122 aa21.6■■□□□ 1.05
SKP2-201ENST00000274254 LAMB2P55268 1798 aa21.6■■□□□ 1.05
SKP2-201ENST00000274254 RIC1Q4ADV7 1423 aa21.6■■□□□ 1.05
SKP2-201ENST00000274254 GTF2E1P29083 439 aaPredicted RBP21.6■■□□□ 1.05
SKP2-201ENST00000274254 LRRFIP2Q9Y608 721 aaKnown RBP21.6■■□□□ 1.05
SKP2-201ENST00000274254 NPHP1O15259 732 aa21.58■■□□□ 1.04
SKP2-201ENST00000274254 PDE8AO60658 829 aa21.58■■□□□ 1.04
SKP2-201ENST00000274254 HCLS1P14317 486 aaPredicted RBP21.58■■□□□ 1.04
SKP2-201ENST00000274254 HSP90B1P14625 803 aaKnown RBP21.58■■□□□ 1.04
SKP2-201ENST00000274254 PTGER2P43116 358 aa21.58■■□□□ 1.04
SKP2-201ENST00000274254 EPHA10Q5JZY3 1008 aa21.58■■□□□ 1.04
SKP2-201ENST00000274254 C1orf115Q9H7X2 142 aa21.58■■□□□ 1.04
SKP2-201ENST00000274254 POLD1P28340 1107 aa21.57■■□□□ 1.04
SKP2-201ENST00000274254 ST5P78524 1137 aa21.57■■□□□ 1.04
SKP2-201ENST00000274254 FOXO4P98177 505 aa21.57■■□□□ 1.04
SKP2-201ENST00000274254 RABL6Q3YEC7 729 aaPredicted RBP21.57■■□□□ 1.04
SKP2-201ENST00000274254 CCDC24Q8N4L8 307 aa21.57■■□□□ 1.04
SKP2-201ENST00000274254 BICC1Q9H694 974 aaKnown RBP21.57■■□□□ 1.04
SKP2-201ENST00000274254 MYH3P11055 1940 aa21.57■■□□□ 1.04
SKP2-201ENST00000274254 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
SKP2-201ENST00000274254 TNRC6CQ9HCJ0 1690 aaKnown RBP21.55■■□□□ 1.04
SKP2-201ENST00000274254 ANKRD31Q8N7Z5 1873 aa21.55■■□□□ 1.04
SKP2-201ENST00000274254 CSF1RP07333 972 aa21.55■■□□□ 1.04
SKP2-201ENST00000274254 CTSWP56202 376 aa21.55■■□□□ 1.04
SKP2-201ENST00000274254 BRIP1Q9BX63 1249 aa21.55■■□□□ 1.04
SKP2-201ENST00000274254 SPON1Q9HCB6 807 aa21.55■■□□□ 1.04
SKP2-201ENST00000274254 MTX1Q13505 466 aa21.54■■□□□ 1.04
SKP2-201ENST00000274254 CEP85Q6P2H3 762 aa21.54■■□□□ 1.04
SKP2-201ENST00000274254 C3orf67Q6ZVT6 689 aa21.54■■□□□ 1.04
SKP2-201ENST00000274254 TTLL11Q8NHH1 800 aa21.54■■□□□ 1.04
SKP2-201ENST00000274254 C10orf71Q711Q0 1435 aa21.54■■□□□ 1.04
SKP2-201ENST00000274254 KLRG2A4D1S0 409 aaPredicted RBP21.53■■□□□ 1.04
SKP2-201ENST00000274254 SF3B3Q15393 1217 aaKnown RBP21.53■■□□□ 1.04
SKP2-201ENST00000274254 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
SKP2-201ENST00000274254 NLRP3Q96P20 1036 aa21.53■■□□□ 1.04
SKP2-201ENST00000274254 PCDHB15Q9Y5E8 787 aa21.53■■□□□ 1.04
SKP2-201ENST00000274254 LMBR1LQ6UX01 489 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms