RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
RTN1-201ENST00000267484 NDUFB9Q9Y6M9 179 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 ZNF710Q8N1W2 664 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 EVI5LQ96CN4 794 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 KAZALD1Q96I82 304 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 BICC1Q9H694 974 aaKnown RBP20.15■□□□□ 0.82
RTN1-201ENST00000267484 DBF4Q9UBU7 674 aaPredicted RBP20.15■□□□□ 0.82
RTN1-201ENST00000267484 SLC27A2O14975 620 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 CHGBP05060 677 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 LUZP1Q86V48 1076 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 IP6K1Q92551 441 aa20.15■□□□□ 0.82
RTN1-201ENST00000267484 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
RTN1-201ENST00000267484 N4BP2Q86UW6 1770 aaPredicted RBP20.14■□□□□ 0.82
RTN1-201ENST00000267484 GPATCH3Q96I76 525 aa20.14■□□□□ 0.82
RTN1-201ENST00000267484 ZSCAN31Q96LW9 406 aaPredicted RBP20.14■□□□□ 0.81
RTN1-201ENST00000267484 FSD1Q9BTV5 496 aa20.14■□□□□ 0.81
RTN1-201ENST00000267484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.13■□□□□ 0.81
RTN1-201ENST00000267484 MTX1Q13505 466 aa20.13■□□□□ 0.81
RTN1-201ENST00000267484 ZNF589Q86UQ0 364 aaPredicted RBP20.13■□□□□ 0.81
RTN1-201ENST00000267484 TM6SF1Q9BZW5 370 aa20.12■□□□□ 0.81
RTN1-201ENST00000267484 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
RTN1-201ENST00000267484 LARP1Q6PKG0 1096 aaKnown RBP20.12■□□□□ 0.81
RTN1-201ENST00000267484 KSR2Q6VAB6 950 aa20.12■□□□□ 0.81
RTN1-201ENST00000267484 MAP4K1Q92918 833 aa20.12■□□□□ 0.81
RTN1-201ENST00000267484 PHF8Q9UPP1 1060 aa20.12■□□□□ 0.81
RTN1-201ENST00000267484 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
RTN1-201ENST00000267484 CCDC192P0DO97 292 aa20.12■□□□□ 0.81
RTN1-201ENST00000267484 G3BP1Q13283 466 aaKnown RBP eCLIP20.12■□□□□ 0.81
RTN1-201ENST00000267484 KRT85P78386 507 aa20.11■□□□□ 0.81
RTN1-201ENST00000267484 DACT1Q9NYF0 836 aa20.11■□□□□ 0.81
RTN1-201ENST00000267484 PTGS1P23219 599 aa20.11■□□□□ 0.81
RTN1-201ENST00000267484 HOXB7P09629 217 aa20.11■□□□□ 0.81
RTN1-201ENST00000267484 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
RTN1-201ENST00000267484 KCNB2Q92953 911 aa20.11■□□□□ 0.81
RTN1-201ENST00000267484 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
RTN1-201ENST00000267484 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 KIAA1524Q8TCG1 905 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 NUP62CLQ9H1M0 184 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 SPTLC3Q9NUV7 552 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 MRVI1Q9Y6F6 885 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 GRM8O00222 908 aa20.1■□□□□ 0.81
RTN1-201ENST00000267484 CCDC9Q9Y3X0 531 aaKnown RBP20.1■□□□□ 0.81
RTN1-201ENST00000267484 TYRO3Q06418 890 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 JAK2O60674 1132 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
RTN1-201ENST00000267484 TOB2Q14106 344 aaPredicted RBP20.09■□□□□ 0.81
RTN1-201ENST00000267484 MAP3K11Q16584 847 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 PXDNQ92626 1479 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 FOSBP53539 338 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 ERC1Q8IUD2 1116 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
RTN1-201ENST00000267484 MYL6BP14649 208 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 C1orf141Q5JVX7 400 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 NRBP1Q9UHY1 535 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 CRYBG1Q9Y4K1 1723 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 PPFIA3O75145 1194 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 ALDH1L1O75891 902 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 LRMPQ12912 555 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 SLC39A6Q13433 755 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 ANO6Q4KMQ2 910 aa20.08■□□□□ 0.81
RTN1-201ENST00000267484 PLEKHO1Q53GL0 409 aaPredicted RBP20.08■□□□□ 0.81
RTN1-201ENST00000267484 GOLGA6L4A6NEF3 574 aa20.08■□□□□ 0.8
RTN1-201ENST00000267484 PSME1Q06323 249 aa20.08■□□□□ 0.8
RTN1-201ENST00000267484 ESCO1Q5FWF5 840 aa20.08■□□□□ 0.8
RTN1-201ENST00000267484 EPHA10Q5JZY3 1008 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 SPATA32Q96LK8 384 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 LRRC2Q9BYS8 371 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
RTN1-201ENST00000267484 TNMDQ9H2S6 317 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 CCDC129Q6ZRS4 1044 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 FAM200AQ8TCP9 573 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 RGPD2P0DJD1 1756 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 CEBPZQ03701 1054 aaKnown RBP20.07■□□□□ 0.8
RTN1-201ENST00000267484 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
RTN1-201ENST00000267484 HMGN5P82970 282 aaKnown RBP20.06■□□□□ 0.8
RTN1-201ENST00000267484 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
RTN1-201ENST00000267484 LTN1O94822 1766 aa20.06■□□□□ 0.8
RTN1-201ENST00000267484 RIOK3O14730 519 aaKnown RBP20.06■□□□□ 0.8
RTN1-201ENST00000267484 IGKV5-2P06315 115 aa20.06■□□□□ 0.8
RTN1-201ENST00000267484 PSMA5P28066 241 aa20.06■□□□□ 0.8
RTN1-201ENST00000267484 DRC7Q8IY82 874 aa20.06■□□□□ 0.8
RTN1-201ENST00000267484 CBX8Q9HC52 389 aa20.06■□□□□ 0.8
RTN1-201ENST00000267484 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
RTN1-201ENST00000267484 NR1I2O75469 434 aa20.05■□□□□ 0.8
RTN1-201ENST00000267484 CCDC186Q7Z3E2 898 aa20.05■□□□□ 0.8
RTN1-201ENST00000267484 LINS1Q8NG48 757 aa20.05■□□□□ 0.8
RTN1-201ENST00000267484 SEC62Q99442 399 aaKnown RBP20.05■□□□□ 0.8
RTN1-201ENST00000267484 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
RTN1-201ENST00000267484 MTERF4Q7Z6M4 381 aaKnown RBP20.05■□□□□ 0.8
RTN1-201ENST00000267484 CBX1P83916 185 aa20.05■□□□□ 0.8
RTN1-201ENST00000267484 THEMISQ8N1K5 641 aaPredicted RBP20.05■□□□□ 0.8
RTN1-201ENST00000267484 LEO1Q8WVC0 666 aaPredicted RBP20.05■□□□□ 0.8
RTN1-201ENST00000267484 MED1Q15648 1581 aaPredicted RBP20.04■□□□□ 0.8
RTN1-201ENST00000267484 CCDC94Q9BW85 323 aaPredicted RBP20.04■□□□□ 0.8
RTN1-201ENST00000267484 BICD2Q8TD16 824 aa20.04■□□□□ 0.8
RTN1-201ENST00000267484 PGBD1Q96JS3 809 aa20.04■□□□□ 0.8
RTN1-201ENST00000267484 KDM3BQ7LBC6 1761 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms