RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 HDAC1Q13547 482 aaPredicted RBP6.54□□□□□ -1.36
VCAN-201ENST00000265077 ZNF445P59923 1031 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 DESP17661 470 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 VPS36Q86VN1 386 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 CACNA1FO60840 1977 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 MAP1BP46821 2468 aaKnown RBP6.54□□□□□ -1.36
VCAN-201ENST00000265077 KDM5AP29375 1690 aaKnown RBP6.54□□□□□ -1.36
VCAN-201ENST00000265077 MYO1CO00159 1063 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 PEX19P40855 299 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 ELF2Q15723 593 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 SSH1Q8WYL5 1049 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 ZMAT2Q96NC0 199 aaKnown RBP6.54□□□□□ -1.36
VCAN-201ENST00000265077 ATF3P18847 181 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 NLRP2Q9NX02 1062 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 ABCA10Q8WWZ4 1543 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 SYT10Q6XYQ8 523 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 EFCAB13Q8IY85 973 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 SNX21Q969T3 373 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 CABP1Q9NZU7 370 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 SCAF11Q99590 1463 aaKnown RBP6.53□□□□□ -1.36
VCAN-201ENST00000265077 OAS2P29728 719 aaKnown RBP6.53□□□□□ -1.36
VCAN-201ENST00000265077 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 MRC2Q9UBG0 1479 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 DUSP27Q5VZP5 1158 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 CCDC114Q96M63 670 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 CCDC175P0C221 793 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 PAFAH1B1P43034 410 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 KIF4BQ2VIQ3 1234 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 CCDC38Q502W7 563 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 RAD50Q92878 1312 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 SH3GL3Q99963 347 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 FAM184BQ9ULE4 1060 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 PPP1R12BO60237 982 aaPredicted RBP6.53□□□□□ -1.36
VCAN-201ENST00000265077 NBPF20Q3BBV1 942 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 FKBP15Q5T1M5 1219 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 SKAP1Q86WV1 359 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 TANGO6Q9C0B7 1094 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 CNNM1Q9NRU3 951 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 GOLGA1Q92805 767 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 HYPKQ9NX55 129 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 CEP126Q9P2H0 1117 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 ODF2LQ9ULJ1 636 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 SH3BGRP55822 239 aaPredicted RBP6.53□□□□□ -1.36
VCAN-201ENST00000265077 ALS2CR12Q96Q35 445 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 TRIM4Q9C037 500 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 USO1O60763 962 aaKnown RBP6.53□□□□□ -1.36
VCAN-201ENST00000265077 HCLS1P14317 486 aaPredicted RBP6.53□□□□□ -1.36
VCAN-201ENST00000265077 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 ATP2B3Q16720 1220 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 IL16Q14005 1332 aa6.53□□□□□ -1.36
VCAN-201ENST00000265077 LAMC3Q9Y6N6 1575 aa6.52□□□□□ -1.36
VCAN-201ENST00000265077 MAGEA9P43362 315 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 LMNTD2Q8IXW0 634 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 C8orf76Q96K31 380 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 MYH9P35579 1960 aaKnown RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 PPP1R12AO14974 1030 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 KANK3Q6NY19 840 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 SYTL4Q96C24 671 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 CTCFLQ8NI51 663 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 RAB34Q9BZG1 259 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 CDK13Q14004 1512 aaKnown RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 MAGI1Q96QZ7 1491 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 CAMK4Q16566 473 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 YEATS4O95619 227 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 SPECC1LQ69YQ0 1117 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 DONSONQ9NYP3 566 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 TUBBP07437 444 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 TATP17735 454 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 LRRC23Q53EV4 343 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 ZNF530Q6P9A1 599 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 CEP128Q6ZU80 1094 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 POTEJP0CG39 1038 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 SKILP12757 684 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 ZNF365Q70YC5 407 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 AFAP1L1Q8TED9 768 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 GCOM1H8Y6P7 765 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 MYZAPP0CAP1 466 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 SLC8A1P32418 973 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 PDCD2Q16342 344 aaPredicted RBP6.52□□□□□ -1.37
VCAN-201ENST00000265077 MICAL1Q8TDZ2 1067 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 FAM210AQ96ND0 272 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 MPHOSPH8Q99549 860 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 RBSNQ9H1K0 784 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 ANKRD18BA2A2Z9 1011 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 CCDC184Q52MB2 194 aa6.52□□□□□ -1.37
VCAN-201ENST00000265077 STX6O43752 255 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 ZNF165P49910 485 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 TAX1BP1Q86VP1 789 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 CCDC61Q9Y6R9 512 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 GIGYF2Q6Y7W6 1299 aaKnown RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 ZSCAN16Q9H4T2 348 aaPredicted RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 ANKS4BQ8N8V4 417 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 N4BP2L2Q92802 583 aaPredicted RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 PRG4Q92954 1404 aaPredicted RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 GNAT3A8MTJ3 354 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 CKAP4Q07065 602 aaKnown RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 SMC5Q8IY18 1101 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms