RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 CAMTA2O94983 1202 aa29.57■■■□□ 2.32
EPCAM-201ENST00000263735 NOP58Q9Y2X3 529 aaKnown RBP29.57■■■□□ 2.32
EPCAM-201ENST00000263735 SURF6O75683 361 aaKnown RBP29.57■■■□□ 2.32
EPCAM-201ENST00000263735 PCCAP05165 728 aaPredicted RBP29.57■■■□□ 2.32
EPCAM-201ENST00000263735 EPHA10Q5JZY3 1008 aa29.57■■■□□ 2.32
EPCAM-201ENST00000263735 TUBGCP6Q96RT7 1819 aa29.56■■■□□ 2.32
EPCAM-201ENST00000263735 APBB1O00213 710 aa29.56■■■□□ 2.32
EPCAM-201ENST00000263735 FAM161AQ3B820 660 aa29.56■■■□□ 2.32
EPCAM-201ENST00000263735 NLRP10Q86W26 655 aa29.56■■■□□ 2.32
EPCAM-201ENST00000263735 JARID2Q92833 1246 aaPredicted RBP29.56■■■□□ 2.32
EPCAM-201ENST00000263735 CASZ1Q86V15 1759 aa29.55■■■□□ 2.32
EPCAM-201ENST00000263735 RGL2O15211 777 aa29.55■■■□□ 2.32
EPCAM-201ENST00000263735 RPS6KA4O75676 772 aa29.55■■■□□ 2.32
EPCAM-201ENST00000263735 ZNF34Q8IZ26 560 aa29.55■■■□□ 2.32
EPCAM-201ENST00000263735 SLC27A3Q5K4L6 730 aa29.54■■■□□ 2.32
EPCAM-201ENST00000263735 ZBTB38Q8NAP3 1195 aaPredicted RBP29.54■■■□□ 2.32
EPCAM-201ENST00000263735 BACH2Q9BYV9 841 aa29.54■■■□□ 2.32
EPCAM-201ENST00000263735 POTEAQ6S8J7 498 aa29.54■■■□□ 2.32
EPCAM-201ENST00000263735 ZNF652Q9Y2D9 606 aa29.54■■■□□ 2.32
EPCAM-201ENST00000263735 DDX60Q8IY21 1712 aaKnown RBP29.53■■■□□ 2.32
EPCAM-201ENST00000263735 CDHR2Q9BYE9 1310 aa29.53■■■□□ 2.32
EPCAM-201ENST00000263735 SMARCA5O60264 1052 aaPredicted RBP29.53■■■□□ 2.32
EPCAM-201ENST00000263735 GPTP24298 496 aa29.53■■■□□ 2.32
EPCAM-201ENST00000263735 FOXO4P98177 505 aa29.52■■■□□ 2.32
EPCAM-201ENST00000263735 COL24A1Q17RW2 1714 aa29.52■■■□□ 2.32
EPCAM-201ENST00000263735 CLEC4GQ6UXB4 293 aa29.51■■■□□ 2.32
EPCAM-201ENST00000263735 KIF1BPQ96EK5 621 aa29.51■■■□□ 2.32
EPCAM-201ENST00000263735 GNPATO15228 680 aa29.51■■■□□ 2.31
EPCAM-201ENST00000263735 HMGB2P26583 209 aaKnown RBP29.51■■■□□ 2.31
EPCAM-201ENST00000263735 RTL5Q5HYW3 569 aaPredicted RBP29.51■■■□□ 2.31
EPCAM-201ENST00000263735 PLA2G12BQ9BX93 195 aa29.51■■■□□ 2.31
EPCAM-201ENST00000263735 RTCBQ9Y3I0 505 aaKnown RBP29.51■■■□□ 2.31
EPCAM-201ENST00000263735 UBN2Q6ZU65 1347 aa29.5■■■□□ 2.31
EPCAM-201ENST00000263735 C8orf34Q49A92 452 aa29.5■■■□□ 2.31
EPCAM-201ENST00000263735 PLEKHM2Q8IWE5 1019 aa29.5■■■□□ 2.31
EPCAM-201ENST00000263735 LRRC4BQ9NT99 713 aa29.5■■■□□ 2.31
EPCAM-201ENST00000263735 ERC1Q8IUD2 1116 aa29.49■■■□□ 2.31
EPCAM-201ENST00000263735 AK9Q5TCS8 1911 aa29.49■■■□□ 2.31
EPCAM-201ENST00000263735 PARP10Q53GL7 1025 aa29.48■■■□□ 2.31
EPCAM-201ENST00000263735 LMBR1LQ6UX01 489 aa29.48■■■□□ 2.31
EPCAM-201ENST00000263735 RHPN1Q8TCX5 695 aa29.48■■■□□ 2.31
EPCAM-201ENST00000263735 FAM89AQ96GI7 184 aa29.48■■■□□ 2.31
EPCAM-201ENST00000263735 PA2G4Q9UQ80 394 aaKnown RBP29.48■■■□□ 2.31
EPCAM-201ENST00000263735 OS9Q13438 667 aaPredicted RBP29.47■■■□□ 2.31
EPCAM-201ENST00000263735 COPRSQ9NQ92 184 aa29.47■■■□□ 2.31
EPCAM-201ENST00000263735 RFX5P48382 616 aaPredicted RBP29.46■■■□□ 2.31
EPCAM-201ENST00000263735 BMP2KLQ5H9B9 411 aa29.46■■■□□ 2.31
EPCAM-201ENST00000263735 C16orf71Q8IYS4 520 aaPredicted RBP29.46■■■□□ 2.31
EPCAM-201ENST00000263735 AK7Q96M32 723 aa29.46■■■□□ 2.31
EPCAM-201ENST00000263735 NARFQ9UHQ1 456 aa29.46■■■□□ 2.31
EPCAM-201ENST00000263735 TRMT112Q9UI30 125 aaKnown RBP29.46■■■□□ 2.31
EPCAM-201ENST00000263735 PLSCR1O15162 318 aa29.45■■■□□ 2.3
EPCAM-201ENST00000263735 SALL3Q9BXA9 1300 aa29.45■■■□□ 2.3
EPCAM-201ENST00000263735 G3BP1Q13283 466 aaKnown RBP eCLIP29.44■■■□□ 2.3
EPCAM-201ENST00000263735 RBM19Q9Y4C8 960 aaKnown RBP29.44■■■□□ 2.3
EPCAM-201ENST00000263735 PTPN12Q05209 780 aaKnown RBP29.43■■■□□ 2.3
EPCAM-201ENST00000263735 OSBPL3Q9H4L5 887 aa29.43■■■□□ 2.3
EPCAM-201ENST00000263735 NIP7Q9Y221 180 aaKnown RBP eCLIP29.43■■■□□ 2.3
EPCAM-201ENST00000263735 ADRA2BP18089 450 aa29.42■■■□□ 2.3
EPCAM-201ENST00000263735 OTUD7AQ8TE49 926 aaPredicted RBP29.42■■■□□ 2.3
EPCAM-201ENST00000263735 TXNRD1Q16881 649 aa29.42■■■□□ 2.3
EPCAM-201ENST00000263735 BCL11AQ9H165 835 aa29.42■■■□□ 2.3
EPCAM-201ENST00000263735 IL1RAPL2Q9NP60 686 aa29.42■■■□□ 2.3
EPCAM-201ENST00000263735 CHMP3Q9Y3E7 222 aa29.42■■■□□ 2.3
EPCAM-201ENST00000263735 ZPR1O75312 459 aa29.41■■■□□ 2.3
EPCAM-201ENST00000263735 SUSD4Q5VX71 490 aa29.41■■■□□ 2.3
EPCAM-201ENST00000263735 UTP14AQ9BVJ6 771 aaKnown RBP29.41■■■□□ 2.3
EPCAM-201ENST00000263735 IRS4O14654 1257 aaPredicted RBP29.4■■■□□ 2.3
EPCAM-201ENST00000263735 SH3TC1Q8TE82 1336 aa29.4■■■□□ 2.3
EPCAM-201ENST00000263735 CSF1RP07333 972 aa29.4■■■□□ 2.3
EPCAM-201ENST00000263735 PDE1AP54750 535 aa29.4■■■□□ 2.3
EPCAM-201ENST00000263735 TTC22Q5TAA0 569 aa29.4■■■□□ 2.3
EPCAM-201ENST00000263735 KLHDC4Q8TBB5 520 aa29.4■■■□□ 2.3
EPCAM-201ENST00000263735 ARHGEF1Q92888 912 aaKnown RBP29.4■■■□□ 2.3
EPCAM-201ENST00000263735 PDE8AO60658 829 aa29.39■■■□□ 2.3
EPCAM-201ENST00000263735 MX1P20591 662 aa29.39■■■□□ 2.3
EPCAM-201ENST00000263735 TRAPPC3LQ5T215 181 aa29.39■■■□□ 2.3
EPCAM-201ENST00000263735 USPL1Q5W0Q7 1092 aa29.39■■■□□ 2.3
EPCAM-201ENST00000263735 SIL1Q9H173 461 aa29.39■■■□□ 2.3
EPCAM-201ENST00000263735 NTSR2O95665 410 aa29.38■■■□□ 2.29
EPCAM-201ENST00000263735 APBA3O96018 575 aa29.38■■■□□ 2.29
EPCAM-201ENST00000263735 AMIGO3Q86WK7 504 aa29.38■■■□□ 2.29
EPCAM-201ENST00000263735 SYNE4Q8N205 404 aa29.38■■■□□ 2.29
EPCAM-201ENST00000263735 CLASRPQ8N2M8 674 aaKnown RBP29.38■■■□□ 2.29
EPCAM-201ENST00000263735 BCL2L12Q9HB09 334 aa29.38■■■□□ 2.29
EPCAM-201ENST00000263735 AOX1Q06278 1338 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 USP42Q9H9J4 1324 aaKnown RBP29.37■■■□□ 2.29
EPCAM-201ENST00000263735 SASH1O94885 1247 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 HSP90B1P14625 803 aaKnown RBP29.37■■■□□ 2.29
EPCAM-201ENST00000263735 CTSWP56202 376 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 STAP2Q9UGK3 403 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 SPEF2Q9C093 1822 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 SMIM5Q71RC9 77 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 PROM2Q8N271 834 aa29.37■■■□□ 2.29
EPCAM-201ENST00000263735 RFC4P35249 363 aa29.36■■■□□ 2.29
EPCAM-201ENST00000263735 CCDC57Q2TAC2 916 aa29.36■■■□□ 2.29
EPCAM-201ENST00000263735 SRP68Q9UHB9 627 aaKnown RBP29.36■■■□□ 2.29
EPCAM-201ENST00000263735 GSPT1P15170 499 aaKnown RBP29.35■■■□□ 2.29
EPCAM-201ENST00000263735 SSFA2P28290 1259 aa29.35■■■□□ 2.29
EPCAM-201ENST00000263735 TTLL11Q8NHH1 800 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms