RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ZBTB9Q96C00 473 aa19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 ZBTB3Q9H5J0 574 aa19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 V9GYY5 206 aaPredicted RBP19.12■□□□□ 0.65
PDZRN3-201ENST00000263666 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 RAD50Q92878 1312 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 GRM8O00222 908 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 A0A087WWV3 80 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 ZNF165P49910 485 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 CDC37L1Q7L3B6 337 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 HIP1O00291 1037 aa19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 LARP1Q6PKG0 1096 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 SH2B1Q9NRF2 756 aaPredicted RBP19.11■□□□□ 0.65
PDZRN3-201ENST00000263666 STK38Q15208 465 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 RALYLQ86SE5 291 aaKnown RBP19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 KIAA0232Q92628 1395 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 JAK2O60674 1132 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 GCP02774 474 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 ME3Q16798 604 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 NFATC2IPQ8NCF5 419 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 CAMSAP1Q5T5Y3 1602 aa19.1■□□□□ 0.65
PDZRN3-201ENST00000263666 POLR3DP05423 398 aaPredicted RBP19.09■□□□□ 0.65
PDZRN3-201ENST00000263666 SYNE3Q6ZMZ3 975 aa19.09■□□□□ 0.65
PDZRN3-201ENST00000263666 NFXL1Q6ZNB6 911 aa19.09■□□□□ 0.65
PDZRN3-201ENST00000263666 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
PDZRN3-201ENST00000263666 TLR7Q9NYK1 1049 aaKnown RBP19.09■□□□□ 0.65
PDZRN3-201ENST00000263666 IBTKQ9P2D0 1353 aaPredicted RBP19.09■□□□□ 0.65
PDZRN3-201ENST00000263666 SSH3Q8TE77 659 aa19.08■□□□□ 0.65
PDZRN3-201ENST00000263666 SUCLG2Q96I99 432 aa19.08■□□□□ 0.65
PDZRN3-201ENST00000263666 ANKRD1Q15327 319 aa19.08■□□□□ 0.65
PDZRN3-201ENST00000263666 PPP4R3BQ5MIZ7 849 aa19.08■□□□□ 0.65
PDZRN3-201ENST00000263666 CCDC82Q8N4S0 544 aa19.08■□□□□ 0.65
PDZRN3-201ENST00000263666 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 PTPRMP28827 1452 aa19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 PDCL2Q8N4E4 241 aa19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 SEC62Q99442 399 aaKnown RBP19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 KIDINS220Q9ULH0 1771 aa19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 CCDC171Q6TFL3 1326 aa19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 RRP12Q5JTH9 1297 aaKnown RBP19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 CLIP2Q9UDT6 1046 aa19.08■□□□□ 0.64
PDZRN3-201ENST00000263666 LIG1P18858 919 aa19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 Q6ZUG5 572 aa19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 PLEKHG3A1L390 1219 aa19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 EIF4A1P60842 406 aaKnown RBP19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 HSP90AA4PQ58FG1 418 aa19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 SBNO1A3KN83 1393 aa19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 TYRO3Q06418 890 aa19.07■□□□□ 0.64
PDZRN3-201ENST00000263666 NEK1Q96PY6 1258 aa19.06■□□□□ 0.64
PDZRN3-201ENST00000263666 A0A0D9SFI3 127 aa19.06■□□□□ 0.64
PDZRN3-201ENST00000263666 TULP1O00294 542 aaPredicted RBP19.06■□□□□ 0.64
PDZRN3-201ENST00000263666 CCDC144CPQ8IYA2 1237 aa19.06■□□□□ 0.64
PDZRN3-201ENST00000263666 NCOA5Q9HCD5 579 aaKnown RBP19.06■□□□□ 0.64
PDZRN3-201ENST00000263666 CCDC112Q8NEF3 446 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 SCAND2PQ9GZW5 306 aaPredicted RBP19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 SETBP1Q9Y6X0 1596 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 TPM4P67936 248 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 OSBPL3Q9H4L5 887 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 TPCN1Q9ULQ1 816 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 TFCP2Q12800 502 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 TNNT1P13805 278 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 TIMM10P62072 90 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 TRDNQ13061 729 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 AMOTQ4VCS5 1084 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 LMBR1LQ6UX01 489 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 PDILTQ8N807 584 aa19.05■□□□□ 0.64
PDZRN3-201ENST00000263666 LRMPQ12912 555 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 OTUD7BQ6GQQ9 843 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 TMX1Q9H3N1 280 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 HYPKQ9NX55 129 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 APOBRQ0VD83 1088 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 SIRT1Q96EB6 747 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 SLC27A2O14975 620 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 LSG1Q9H089 658 aaKnown RBP19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 ATP10DQ9P241 1426 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 DIP2CQ9Y2E4 1556 aa19.04■□□□□ 0.64
PDZRN3-201ENST00000263666 NRXN1Q9ULB1 1477 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 DYNC1I1O14576 645 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 ANKRD13DQ6ZTN6 518 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 FSIP1Q8NA03 581 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 MED14O60244 1454 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 CPS1P31327 1500 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 CYP2E1P05181 493 aaPredicted RBP19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 BEND3Q5T5X7 828 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 MTMR6Q9Y217 621 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 ATP7BP35670 1465 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 MCM5P33992 734 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 SLFNL1Q499Z3 407 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 DBNDD2Q9BQY9 259 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 NEXMIFQ5QGS0 1516 aa19.03■□□□□ 0.64
PDZRN3-201ENST00000263666 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 CUL4AQ13619 759 aa19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 TTC6Q86TZ1 520 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms