RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
TRAF4-202ENST00000262396 RUNDC1Q96C34 613 aa15.97■□□□□ 0.15
TRAF4-202ENST00000262396 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
TRAF4-202ENST00000262396 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
TRAF4-202ENST00000262396 ANXA1P04083 346 aa15.96■□□□□ 0.15
TRAF4-202ENST00000262396 LDHDQ86WU2 507 aa15.96■□□□□ 0.15
TRAF4-202ENST00000262396 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 FER1L6Q2WGJ9 1857 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 PSMD1Q99460 953 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 TAF1DQ9H5J8 278 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-202ENST00000262396 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
TRAF4-202ENST00000262396 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 NTSR2O95665 410 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 EPHX2P34913 555 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 PNMA8AQ86V59 439 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-202ENST00000262396 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 L3MBTL3Q96JM7 780 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-202ENST00000262396 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 MKRN1Q9UHC7 482 aaKnown RBP15.94■□□□□ 0.14
TRAF4-202ENST00000262396 TRMT112Q9UI30 125 aaKnown RBP15.94■□□□□ 0.14
TRAF4-202ENST00000262396 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-202ENST00000262396 KDM3BQ7LBC6 1761 aa15.94■□□□□ 0.14
TRAF4-202ENST00000262396 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
TRAF4-202ENST00000262396 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
TRAF4-202ENST00000262396 HOXA10P31260 410 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-202ENST00000262396 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
TRAF4-202ENST00000262396 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
TRAF4-202ENST00000262396 GPC2Q8N158 579 aa15.93■□□□□ 0.14
TRAF4-202ENST00000262396 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
TRAF4-202ENST00000262396 RNF123Q5XPI4 1314 aa15.93■□□□□ 0.14
TRAF4-202ENST00000262396 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
TRAF4-202ENST00000262396 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
TRAF4-202ENST00000262396 SUPT20HQ8NEM7 779 aa15.92■□□□□ 0.14
TRAF4-202ENST00000262396 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAF4-202ENST00000262396 ARFGEF2Q9Y6D5 1785 aa15.91■□□□□ 0.14
TRAF4-202ENST00000262396 FZD9O00144 591 aa15.91■□□□□ 0.14
TRAF4-202ENST00000262396 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
TRAF4-202ENST00000262396 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
TRAF4-202ENST00000262396 ADAMTS8Q9UP79 889 aa15.91■□□□□ 0.14
TRAF4-202ENST00000262396 DICER1Q9UPY3 1922 aaKnown RBP15.91■□□□□ 0.14
TRAF4-202ENST00000262396 HCLS1P14317 486 aaPredicted RBP15.9■□□□□ 0.14
TRAF4-202ENST00000262396 CALD1Q05682 793 aaKnown RBP15.9■□□□□ 0.14
TRAF4-202ENST00000262396 PDIA6Q15084 440 aa15.9■□□□□ 0.14
TRAF4-202ENST00000262396 DPP8Q6V1X1 898 aaPredicted RBP15.9■□□□□ 0.14
TRAF4-202ENST00000262396 CHPF2Q9P2E5 772 aa15.9■□□□□ 0.14
TRAF4-202ENST00000262396 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
TRAF4-202ENST00000262396 RIC1Q4ADV7 1423 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 TMEM88BA6NKF7 163 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 CHL1O00533 1208 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 BBOX1O75936 387 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 TCIRG1Q13488 830 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 NLRP10Q86W26 655 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 TNS4Q8IZW8 715 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 ZNF428Q96B54 188 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 AIDAQ96BJ3 306 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
TRAF4-202ENST00000262396 NUP98P52948 1817 aa15.89■□□□□ 0.13
TRAF4-202ENST00000262396 AOC3Q16853 763 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 KRT24Q2M2I5 525 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
TRAF4-202ENST00000262396 CNTROBQ8N137 903 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 MPNDQ8N594 471 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 ABT1Q9ULW3 272 aaKnown RBP15.88■□□□□ 0.13
TRAF4-202ENST00000262396 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 ABCC4O15439 1325 aa15.88■□□□□ 0.13
TRAF4-202ENST00000262396 CAPN15O75808 1086 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 SLC10A5Q5PT55 438 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 COL13A1Q5TAT6 717 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-202ENST00000262396 MAP1SQ66K74 1059 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-202ENST00000262396 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 PLBD2Q8NHP8 589 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 HYPKQ9NX55 129 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
TRAF4-202ENST00000262396 HOXB7P09629 217 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 VPS33BQ9H267 617 aa15.86■□□□□ 0.13
TRAF4-202ENST00000262396 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
TRAF4-202ENST00000262396 GRAPQ13588 217 aa15.85■□□□□ 0.13
TRAF4-202ENST00000262396 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
TRAF4-202ENST00000262396 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
TRAF4-202ENST00000262396 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
TRAF4-202ENST00000262396 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
TRAF4-202ENST00000262396 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
TRAF4-202ENST00000262396 SCN4AP35499 1836 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 G3V3G9 751 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 ELL2O00472 640 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-202ENST00000262396 APAF1O14727 1248 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
TRAF4-202ENST00000262396 GNAI1P63096 354 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms