RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 CLEC4GQ6UXB4 293 aa20.76■□□□□ 0.91
HLA-F-216ENST00000259951 NLRP10Q86W26 655 aa20.76■□□□□ 0.91
HLA-F-216ENST00000259951 GNPATO15228 680 aa20.75■□□□□ 0.91
HLA-F-216ENST00000259951 ZNF34Q8IZ26 560 aa20.75■□□□□ 0.91
HLA-F-216ENST00000259951 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-216ENST00000259951 SURF6O75683 361 aaKnown RBP20.75■□□□□ 0.91
HLA-F-216ENST00000259951 RABL6Q3YEC7 729 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-216ENST00000259951 PARP10Q53GL7 1025 aa20.75■□□□□ 0.91
HLA-F-216ENST00000259951 AK7Q96M32 723 aa20.75■□□□□ 0.91
HLA-F-216ENST00000259951 EXOC6BQ9Y2D4 811 aa20.75■□□□□ 0.91
HLA-F-216ENST00000259951 SCN7AQ01118 1682 aa20.74■□□□□ 0.91
HLA-F-216ENST00000259951 PLSCR1O15162 318 aa20.74■□□□□ 0.91
HLA-F-216ENST00000259951 GPTP24298 496 aa20.74■□□□□ 0.91
HLA-F-216ENST00000259951 PDE4AP27815 886 aa20.74■□□□□ 0.91
HLA-F-216ENST00000259951 LRRCC1Q9C099 1032 aa20.74■□□□□ 0.91
HLA-F-216ENST00000259951 NOP58Q9Y2X3 529 aaKnown RBP20.74■□□□□ 0.91
HLA-F-216ENST00000259951 CDHR2Q9BYE9 1310 aa20.73■□□□□ 0.91
HLA-F-216ENST00000259951 JARID2Q92833 1246 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-216ENST00000259951 CCDC125Q86Z20 511 aa20.72■□□□□ 0.91
HLA-F-216ENST00000259951 NARFQ9UHQ1 456 aa20.72■□□□□ 0.91
HLA-F-216ENST00000259951 MYH3P11055 1940 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 APBB1O00213 710 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 ADRA2BP18089 450 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 EPHA10Q5JZY3 1008 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 ERC1Q8IUD2 1116 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 PLA2G12BQ9BX93 195 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 LRRC4BQ9NT99 713 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 RGPD3A6NKT7 1758 aaPredicted RBP20.71■□□□□ 0.91
HLA-F-216ENST00000259951 RGPD4Q7Z3J3 1758 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 TNS1Q9HBL0 1735 aaKnown RBP20.71■□□□□ 0.91
HLA-F-216ENST00000259951 ZPR1O75312 459 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 APBA3O96018 575 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 FOXO4P98177 505 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 KIF1BPQ96EK5 621 aa20.71■□□□□ 0.91
HLA-F-216ENST00000259951 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
HLA-F-216ENST00000259951 HSP90B1P14625 803 aaKnown RBP20.7■□□□□ 0.9
HLA-F-216ENST00000259951 OS9Q13438 667 aaPredicted RBP20.7■□□□□ 0.9
HLA-F-216ENST00000259951 TXNRD1Q16881 649 aa20.7■□□□□ 0.9
HLA-F-216ENST00000259951 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
HLA-F-216ENST00000259951 UBR3Q6ZT12 1888 aa20.7■□□□□ 0.9
HLA-F-216ENST00000259951 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
HLA-F-216ENST00000259951 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
HLA-F-216ENST00000259951 FAM89AQ96GI7 184 aa20.69■□□□□ 0.9
HLA-F-216ENST00000259951 NIP7Q9Y221 180 aaKnown RBP eCLIP20.69■□□□□ 0.9
HLA-F-216ENST00000259951 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
HLA-F-216ENST00000259951 C4AP0C0L4 1744 aa20.69■□□□□ 0.9
HLA-F-216ENST00000259951 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
HLA-F-216ENST00000259951 UTP14AQ9BVJ6 771 aaKnown RBP20.68■□□□□ 0.9
HLA-F-216ENST00000259951 FAM161AQ3B820 660 aa20.67■□□□□ 0.9
HLA-F-216ENST00000259951 RHPN1Q8TCX5 695 aa20.67■□□□□ 0.9
HLA-F-216ENST00000259951 COPRSQ9NQ92 184 aa20.67■□□□□ 0.9
HLA-F-216ENST00000259951 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
HLA-F-216ENST00000259951 SMARCA5O60264 1052 aaPredicted RBP20.67■□□□□ 0.9
HLA-F-216ENST00000259951 RFC4P35249 363 aa20.67■□□□□ 0.9
HLA-F-216ENST00000259951 ARHGEF1Q92888 912 aaKnown RBP20.67■□□□□ 0.9
HLA-F-216ENST00000259951 CHMP3Q9Y3E7 222 aa20.67■□□□□ 0.9
HLA-F-216ENST00000259951 SH3TC1Q8TE82 1336 aa20.66■□□□□ 0.9
HLA-F-216ENST00000259951 IRS4O14654 1257 aaPredicted RBP20.66■□□□□ 0.9
HLA-F-216ENST00000259951 SSFA2P28290 1259 aa20.65■□□□□ 0.9
HLA-F-216ENST00000259951 RFX5P48382 616 aaPredicted RBP20.65■□□□□ 0.9
HLA-F-216ENST00000259951 SUSD4Q5VX71 490 aa20.65■□□□□ 0.9
HLA-F-216ENST00000259951 USPL1Q5W0Q7 1092 aa20.65■□□□□ 0.9
HLA-F-216ENST00000259951 PLEKHM2Q8IWE5 1019 aa20.65■□□□□ 0.9
HLA-F-216ENST00000259951 PA2G4Q9UQ80 394 aaKnown RBP20.65■□□□□ 0.9
HLA-F-216ENST00000259951 LAMB2P55268 1798 aa20.65■□□□□ 0.9
HLA-F-216ENST00000259951 PDE8AO60658 829 aa20.64■□□□□ 0.9
HLA-F-216ENST00000259951 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.89
HLA-F-216ENST00000259951 CSF1RP07333 972 aa20.64■□□□□ 0.89
HLA-F-216ENST00000259951 SF3B2Q13435 895 aaKnown RBP20.64■□□□□ 0.89
HLA-F-216ENST00000259951 PROM2Q8N271 834 aa20.64■□□□□ 0.89
HLA-F-216ENST00000259951 BACH2Q9BYV9 841 aa20.64■□□□□ 0.89
HLA-F-216ENST00000259951 PHF14O94880 888 aa20.63■□□□□ 0.89
HLA-F-216ENST00000259951 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
HLA-F-216ENST00000259951 CCDC57Q2TAC2 916 aa20.63■□□□□ 0.89
HLA-F-216ENST00000259951 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
HLA-F-216ENST00000259951 C16orf71Q8IYS4 520 aaPredicted RBP20.63■□□□□ 0.89
HLA-F-216ENST00000259951 CLASRPQ8N2M8 674 aaKnown RBP20.63■□□□□ 0.89
HLA-F-216ENST00000259951 COL24A1Q17RW2 1714 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.62■□□□□ 0.89
HLA-F-216ENST00000259951 NTSR2O95665 410 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 CTSWP56202 376 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 NYXQ9GZU5 481 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 BCL11AQ9H165 835 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 BCL2L12Q9HB09 334 aa20.62■□□□□ 0.89
HLA-F-216ENST00000259951 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
HLA-F-216ENST00000259951 OSBPL3Q9H4L5 887 aa20.61■□□□□ 0.89
HLA-F-216ENST00000259951 IL1RAPL2Q9NP60 686 aa20.61■□□□□ 0.89
HLA-F-216ENST00000259951 FBXO3Q9UK99 471 aa20.61■□□□□ 0.89
HLA-F-216ENST00000259951 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
HLA-F-216ENST00000259951 IFIT5Q13325 482 aaKnown RBP20.6■□□□□ 0.89
HLA-F-216ENST00000259951 TBC1D9BQ66K14 1250 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 DEFB132Q7Z7B7 95 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 SIL1Q9H173 461 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 FAM177BA6PVY3 158 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 MX1P20591 662 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 SMIM5Q71RC9 77 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 AMIGO3Q86WK7 504 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 SYNE4Q8N205 404 aa20.6■□□□□ 0.89
HLA-F-216ENST00000259951 TTLL11Q8NHH1 800 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms