RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 AMOTQ4VCS5 1084 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 BAZ2BQ9UIF8 2168 aaKnown RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 OPA1O60313 960 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 GTF2A1P52655 376 aaPredicted RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 IQCA1Q86XH1 822 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 TSNARE1Q96NA8 513 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 IDH1O75874 414 aaKnown RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 BMP15O95972 392 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 FERP16591 822 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 SSFA2P28290 1259 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 GJB2P29033 226 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 MTIF2P46199 727 aaKnown RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 FERMT2Q96AC1 680 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 EXOC1Q9NV70 894 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 ADGRL1O94910 1474 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 BAG4O95429 457 aaKnown RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 CTNNA2P26232 953 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 NUTM1Q86Y26 1132 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 UBE2Q2Q8WVN8 375 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 SSH1Q8WYL5 1049 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 GOLGA1Q92805 767 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 MAPKBP1O60336 1514 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 ABCC5O15440 1437 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 NUP160Q12769 1436 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 MNAT1P51948 309 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 GPATCH11Q8N954 259 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 KCNG4Q8TDN1 519 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 KIF4AO95239 1232 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 CKAP2LQ8IYA6 745 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 USP25Q9UHP3 1055 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 USP5P45974 858 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TTC22Q5TAA0 569 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TTC14Q96N46 770 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC94Q9BW85 323 aaPredicted RBP5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TCP11L1Q9NUJ3 509 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 NUCB1Q02818 461 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 KCNH5Q8NCM2 988 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TRMT1Q9NXH9 659 aaKnown RBP5.5□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC194A0A1B0GVG4 234 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TAF7Q15545 349 aaPredicted RBP5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TOM1L2Q6ZVM7 507 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 TMOD2Q9NZR1 351 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 EXOC6BQ9Y2D4 811 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 SYCP2Q9BX26 1530 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 KIAA0556O60303 1618 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 QRICH2Q9H0J4 1663 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 A0A1W2PRG0 241 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC96Q2M329 555 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 THEMISQ8N1K5 641 aaPredicted RBP5.5□□□□□ -1.53
RC3H1-201ENST00000258349 STRN4Q9NRL3 753 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 ANKRD36BQ8N2N9 1353 aa5.5□□□□□ -1.53
RC3H1-201ENST00000258349 ZNF165P49910 485 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 IFIT5Q13325 482 aaKnown RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 SPECC1Q5M775 1068 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 ABCC1P33527 1531 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 MAPK8IP2Q13387 824 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 RRS1Q15050 365 aaKnown RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 DZIP1Q86YF9 867 aaKnown RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 SPINK5Q9NQ38 1064 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 V9GYY5 206 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 BICRAQ9NZM4 1560 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 SYNMO15061 1565 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 POLR3DP05423 398 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 DHX37Q8IY37 1157 aaKnown RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 ERMNQ8TAM6 284 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 SMARCA5O60264 1052 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 GRIPAP1Q4V328 841 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 TDRD12Q587J7 1177 aaKnown RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 UBA5Q9GZZ9 404 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 ZNF213O14771 459 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 SYKP43405 635 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 HDAC1Q13547 482 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 NBPF8Q3BBV2 869 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 PPP1R14CQ8TAE6 165 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 MKNK2Q9HBH9 465 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 CEP152O94986 1710 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 CDC42BPAQ5VT25 1732 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 TUBBP07437 444 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 ZSCAN22P10073 491 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC102BQ68D86 513 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 TXNDC2Q86VQ3 553 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 PIBF1Q8WXW3 757 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 JAKMIP2Q96AA8 810 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 ANKIB1Q9P2G1 1089 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 KDM5BQ9UGL1 1544 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 TTC31Q49AM3 519 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC129Q6ZRS4 1044 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 LRRC45Q96CN5 670 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 LAMC1P11047 1609 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 ZFYVE9O95405 1425 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 IFIT1P09914 478 aaKnown RBP5.49□□□□□ -1.53
RC3H1-201ENST00000258349 UBASH3AP57075 661 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 CEP128Q6ZU80 1094 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 FERMT3Q86UX7 667 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
RC3H1-201ENST00000258349 MYH13Q9UKX3 1938 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 TRIM27P14373 513 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms