RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
CDK4-201ENST00000257904 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
CDK4-201ENST00000257904 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
CDK4-201ENST00000257904 IFIT2P09913 472 aaKnown RBP20.23■□□□□ 0.83
CDK4-201ENST00000257904 PLCB2Q00722 1185 aa20.23■□□□□ 0.83
CDK4-201ENST00000257904 CCDC192P0DO97 292 aa20.22■□□□□ 0.83
CDK4-201ENST00000257904 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
CDK4-201ENST00000257904 NECAB1Q8N987 351 aa20.22■□□□□ 0.83
CDK4-201ENST00000257904 TPCN1Q9ULQ1 816 aa20.22■□□□□ 0.83
CDK4-201ENST00000257904 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
CDK4-201ENST00000257904 ALDH1L1O75891 902 aa20.21■□□□□ 0.83
CDK4-201ENST00000257904 GCP02774 474 aa20.21■□□□□ 0.83
CDK4-201ENST00000257904 TPM3P06753 285 aa20.21■□□□□ 0.83
CDK4-201ENST00000257904 PDIA4P13667 645 aaKnown RBP20.21■□□□□ 0.83
CDK4-201ENST00000257904 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
CDK4-201ENST00000257904 KCNF1Q9H3M0 494 aa20.21■□□□□ 0.83
CDK4-201ENST00000257904 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CDK4-201ENST00000257904 PA2G4Q9UQ80 394 aaKnown RBP20.21■□□□□ 0.83
CDK4-201ENST00000257904 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 KIAA1524Q8TCG1 905 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 JARID2Q92833 1246 aaPredicted RBP20.2■□□□□ 0.82
CDK4-201ENST00000257904 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
CDK4-201ENST00000257904 XIRP1Q702N8 1843 aaKnown RBP20.2■□□□□ 0.82
CDK4-201ENST00000257904 BTBD11A6QL63 1104 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 KRT85P78386 507 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
CDK4-201ENST00000257904 TTC6Q86TZ1 520 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 AACSQ86V21 672 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 ZNF710Q8N1W2 664 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
CDK4-201ENST00000257904 MAP4K1Q92918 833 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 ARID3AQ99856 593 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
CDK4-201ENST00000257904 MAP3K2Q9Y2U5 619 aa20.2■□□□□ 0.82
CDK4-201ENST00000257904 ELP1O95163 1332 aa20.19■□□□□ 0.82
CDK4-201ENST00000257904 TEFQ10587 303 aa20.19■□□□□ 0.82
CDK4-201ENST00000257904 LMO7Q8WWI1 1683 aa20.19■□□□□ 0.82
CDK4-201ENST00000257904 HIP1O00291 1037 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 FAM227BQ96M60 508 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 SNRKQ9NRH2 765 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
CDK4-201ENST00000257904 PSMA5P28066 241 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 KCNJ4P48050 445 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
CDK4-201ENST00000257904 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 FAM200AQ8TCP9 573 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 TSC1Q92574 1164 aa20.18■□□□□ 0.82
CDK4-201ENST00000257904 SLIT3O75094 1523 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 GOLGA6L6A8MZA4 724 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 SLC27A2O14975 620 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 PDCP20941 246 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 MAP3K11Q16584 847 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 PYCARDQ9ULZ3 195 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 KIF3AQ9Y496 699 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 PHRF1Q9P1Y6 1649 aaKnown RBP20.17■□□□□ 0.82
CDK4-201ENST00000257904 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
CDK4-201ENST00000257904 NUP62CLQ9H1M0 184 aa20.17■□□□□ 0.82
CDK4-201ENST00000257904 RGPD2P0DJD1 1756 aa20.16■□□□□ 0.82
CDK4-201ENST00000257904 FERMT3Q86UX7 667 aa20.16■□□□□ 0.82
CDK4-201ENST00000257904 SPC24Q8NBT2 197 aa20.16■□□□□ 0.82
CDK4-201ENST00000257904 LRRC59Q96AG4 307 aaKnown RBP20.16■□□□□ 0.82
CDK4-201ENST00000257904 LIG1P18858 919 aa20.15■□□□□ 0.82
CDK4-201ENST00000257904 COL9A3Q14050 684 aaPredicted RBP20.15■□□□□ 0.82
CDK4-201ENST00000257904 CWF19L2Q2TBE0 894 aaKnown RBP20.15■□□□□ 0.82
CDK4-201ENST00000257904 MRVI1Q9Y6F6 885 aa20.15■□□□□ 0.82
CDK4-201ENST00000257904 SASH1O94885 1247 aa20.15■□□□□ 0.82
CDK4-201ENST00000257904 ANKRD1Q15327 319 aa20.15■□□□□ 0.82
CDK4-201ENST00000257904 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
CDK4-201ENST00000257904 ZNF530Q6P9A1 599 aaPredicted RBP20.15■□□□□ 0.82
CDK4-201ENST00000257904 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
CDK4-201ENST00000257904 DDX17Q92841 729 aaKnown RBP20.15■□□□□ 0.82
CDK4-201ENST00000257904 EAF2Q96CJ1 260 aaPredicted RBP20.15■□□□□ 0.82
CDK4-201ENST00000257904 TYRO3Q06418 890 aa20.14■□□□□ 0.81
CDK4-201ENST00000257904 FAM173BQ6P4H8 233 aa20.14■□□□□ 0.81
CDK4-201ENST00000257904 BLOC1S2Q6QNY1 142 aa20.14■□□□□ 0.81
CDK4-201ENST00000257904 ALDH8A1Q9H2A2 487 aaPredicted RBP20.14■□□□□ 0.81
CDK4-201ENST00000257904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.14■□□□□ 0.81
CDK4-201ENST00000257904 ALS2Q96Q42 1657 aa20.14■□□□□ 0.81
CDK4-201ENST00000257904 RNF20Q5VTR2 975 aa20.14■□□□□ 0.81
CDK4-201ENST00000257904 NPHP3Q7Z494 1330 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
CDK4-201ENST00000257904 RPS6KB1P23443 525 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 CAMK4Q16566 473 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 KAZALD1Q96I82 304 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 SUCLG2Q96I99 432 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 SCAND2PQ9GZW5 306 aaPredicted RBP20.13■□□□□ 0.81
CDK4-201ENST00000257904 CHMP3Q9Y3E7 222 aa20.13■□□□□ 0.81
CDK4-201ENST00000257904 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 GRM8O00222 908 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 G3BP1Q13283 466 aaKnown RBP eCLIP20.12■□□□□ 0.814e-8■□□□□ 10.3
CDK4-201ENST00000257904 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
CDK4-201ENST00000257904 PRDM4Q9UKN5 801 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 UTYO14607 1347 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 HEG1Q9ULI3 1381 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms