RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 NEK1Q96PY6 1258 aa21.22■□□□□ 0.99
EFR3A-201ENST00000254624 SETQ01105 290 aaPredicted RBP21.22■□□□□ 0.99
EFR3A-201ENST00000254624 SIRT1Q96EB6 747 aa21.22■□□□□ 0.99
EFR3A-201ENST00000254624 TMEM67Q5HYA8 995 aa21.22■□□□□ 0.99
EFR3A-201ENST00000254624 DZIP3Q86Y13 1208 aaKnown RBP21.22■□□□□ 0.99
EFR3A-201ENST00000254624 NIP7Q9Y221 180 aaKnown RBP eCLIP21.22■□□□□ 0.99
EFR3A-201ENST00000254624 CCDC194A0A1B0GVG4 234 aa21.21■□□□□ 0.99
EFR3A-201ENST00000254624 LMBR1LQ6UX01 489 aa21.21■□□□□ 0.99
EFR3A-201ENST00000254624 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
EFR3A-201ENST00000254624 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
EFR3A-201ENST00000254624 NLRP5P59047 1200 aa21.21■□□□□ 0.99
EFR3A-201ENST00000254624 PPP4R3BQ5MIZ7 849 aa21.21■□□□□ 0.99
EFR3A-201ENST00000254624 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
EFR3A-201ENST00000254624 PPP1R12BO60237 982 aaPredicted RBP21.2■□□□□ 0.98
EFR3A-201ENST00000254624 VAMP4O75379 141 aa21.2■□□□□ 0.98
EFR3A-201ENST00000254624 JARID2Q92833 1246 aaPredicted RBP21.2■□□□□ 0.98
EFR3A-201ENST00000254624 KAT14Q9H8E8 782 aa21.2■□□□□ 0.98
EFR3A-201ENST00000254624 ADGBQ8N7X0 1667 aa21.2■□□□□ 0.98
EFR3A-201ENST00000254624 TSPY2A6NKD2 308 aa21.19■□□□□ 0.98
EFR3A-201ENST00000254624 CTAGE5O15320 804 aa21.19■□□□□ 0.98
EFR3A-201ENST00000254624 KRT23Q9C075 422 aa21.19■□□□□ 0.98
EFR3A-201ENST00000254624 IARSP41252 1262 aaKnown RBP21.19■□□□□ 0.98
EFR3A-201ENST00000254624 ANO10Q9NW15 660 aa21.19■□□□□ 0.98
EFR3A-201ENST00000254624 MYO1BO43795 1136 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 PDE1AP54750 535 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 CCDC183Q5T5S1 534 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 TPTE2Q6XPS3 522 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 RTCBQ9Y3I0 505 aaKnown RBP21.18■□□□□ 0.98
EFR3A-201ENST00000254624 USP16Q9Y5T5 823 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 TMEM2Q9UHN6 1383 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 NOM1Q5C9Z4 860 aaKnown RBP21.18■□□□□ 0.98
EFR3A-201ENST00000254624 MCM5P33992 734 aa21.18■□□□□ 0.98
EFR3A-201ENST00000254624 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
EFR3A-201ENST00000254624 CNNM2Q9H8M5 875 aa21.17■□□□□ 0.98
EFR3A-201ENST00000254624 BAG4O95429 457 aaKnown RBP21.16■□□□□ 0.98
EFR3A-201ENST00000254624 ZNF804AQ7Z570 1209 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 TSG101Q99816 390 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 METAP2P50579 478 aaKnown RBP eCLIP21.16■□□□□ 0.98
EFR3A-201ENST00000254624 TMTC2Q8N394 836 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 KIF20AO95235 890 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 MATR3P43243 847 aaKnown RBP eCLIP21.16■□□□□ 0.98
EFR3A-201ENST00000254624 PPP4R3AQ6IN85 833 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
EFR3A-201ENST00000254624 SDSP20132 328 aa21.16■□□□□ 0.98
EFR3A-201ENST00000254624 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
EFR3A-201ENST00000254624 PYM1Q9BRP8 204 aaKnown RBP21.16■□□□□ 0.98
EFR3A-201ENST00000254624 TBC1D2Q9BYX2 928 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 HOXB7P09629 217 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 MCMDC2Q4G0Z9 681 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 MTERF4Q7Z6M4 381 aaKnown RBP21.15■□□□□ 0.98
EFR3A-201ENST00000254624 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 GJB2P29033 226 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 EIF5P55010 431 aaKnown RBP21.15■□□□□ 0.98
EFR3A-201ENST00000254624 HDAC9Q9UKV0 1011 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 CYP7A1P22680 504 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 ANAPC15P60006 121 aa21.15■□□□□ 0.98
EFR3A-201ENST00000254624 TTLL12Q14166 644 aaPredicted RBP21.15■□□□□ 0.98
EFR3A-201ENST00000254624 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.98
EFR3A-201ENST00000254624 CCDC82Q8N4S0 544 aa21.14■□□□□ 0.98
EFR3A-201ENST00000254624 ZNF397Q8NF99 534 aaPredicted RBP21.14■□□□□ 0.98
EFR3A-201ENST00000254624 PLXNC1O60486 1568 aa21.14■□□□□ 0.97
EFR3A-201ENST00000254624 FGFR1OPO95684 399 aaKnown RBP21.14■□□□□ 0.97
EFR3A-201ENST00000254624 IL13P35225 146 aa21.14■□□□□ 0.97
EFR3A-201ENST00000254624 PCDHB15Q9Y5E8 787 aa21.14■□□□□ 0.97
EFR3A-201ENST00000254624 ERLIN2O94905 339 aa21.14■□□□□ 0.97
EFR3A-201ENST00000254624 TSHZ3Q63HK5 1081 aa21.14■□□□□ 0.97
EFR3A-201ENST00000254624 FEZ1Q99689 392 aa21.14■□□□□ 0.97
EFR3A-201ENST00000254624 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
EFR3A-201ENST00000254624 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
EFR3A-201ENST00000254624 DESP17661 470 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 GUCY1B3Q02153 619 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 TRAF1Q13077 416 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 HAND2P61296 217 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 ZNF771Q7L3S4 317 aaPredicted RBP21.13■□□□□ 0.97
EFR3A-201ENST00000254624 DNAI2Q9GZS0 605 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 ANKRD2Q9GZV1 360 aa21.13■□□□□ 0.97
EFR3A-201ENST00000254624 ORC3Q9UBD5 711 aaPredicted RBP21.13■□□□□ 0.97
EFR3A-201ENST00000254624 IRS4O14654 1257 aaPredicted RBP21.12■□□□□ 0.97
EFR3A-201ENST00000254624 STX6O43752 255 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 TRIM21P19474 475 aaKnown RBP21.12■□□□□ 0.97
EFR3A-201ENST00000254624 SKAP1Q86WV1 359 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 DDX19AQ9NUU7 478 aaKnown RBP21.12■□□□□ 0.97
EFR3A-201ENST00000254624 ESR2Q92731 530 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 SYCE3A1L190 88 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 CAMK4Q16566 473 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 CCDC181Q5TID7 509 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 ESYT1Q9BSJ8 1104 aa21.12■□□□□ 0.97
EFR3A-201ENST00000254624 GNAT2P19087 354 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 WTAPQ15007 396 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 NAA16Q6N069 864 aaPredicted RBP21.11■□□□□ 0.97
EFR3A-201ENST00000254624 SLC4A4Q9Y6R1 1079 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 CFAP100Q494V2 611 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 TSPYL6Q8N831 410 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 CEP85Q6P2H3 762 aa21.11■□□□□ 0.97
EFR3A-201ENST00000254624 FKBP15Q5T1M5 1219 aa21.1■□□□□ 0.97
EFR3A-201ENST00000254624 PARP3Q9Y6F1 533 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms