RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 APBB1IPQ7Z5R6 666 aaPredicted RBP16.58■□□□□ 0.25
ZC3H4-201ENST00000253048 KIAA1328Q86T90 577 aa16.58■□□□□ 0.25
ZC3H4-201ENST00000253048 TAX1BP1Q86VP1 789 aa16.58■□□□□ 0.25
ZC3H4-201ENST00000253048 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 AMPD3Q01432 767 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 ARHGEF6Q15052 776 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 IQSEC3Q9UPP2 1182 aaPredicted RBP16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.24
ZC3H4-201ENST00000253048 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 NIM1KQ8IY84 436 aa16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 ZBTB24O43167 697 aaPredicted RBP16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 PHACTR2O75167 634 aa16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 USP8P40818 1118 aa16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 CTNNBL1Q8WYA6 563 aaPredicted RBP16.57■□□□□ 0.24
ZC3H4-201ENST00000253048 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 IQCEQ6IPM2 695 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 RNF214Q8ND24 703 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 PRKG1Q13976 671 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 SPOUT1Q5T280 376 aaKnown RBP16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 RGS22Q8NE09 1264 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
ZC3H4-201ENST00000253048 RIMS2Q9UQ26 1411 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 F6X3S4 739 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 DHX29Q7Z478 1369 aaKnown RBP16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 USP37Q86T82 979 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 MACROD2A1Z1Q3 448 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 SMTNL1A8MU46 457 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 STX6O43752 255 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 RXRBP28702 533 aa16.55■□□□□ 0.24
ZC3H4-201ENST00000253048 TCERG1LQ5VWI1 586 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 TCHPQ9BT92 498 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 PRC1O43663 620 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 PIK3R4Q99570 1358 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 NCOA1Q15788 1441 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 H7C1D1 291 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 TSPYL1Q9H0U9 437 aa16.54■□□□□ 0.24
ZC3H4-201ENST00000253048 FLIIQ13045 1269 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 CCDC91Q7Z6B0 441 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 HOOK3Q86VS8 718 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 SPA17Q15506 151 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 UFL1O94874 794 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
ZC3H4-201ENST00000253048 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 ABCC5O15440 1437 aa16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 IDEP14735 1019 aa16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 CCDC40Q4G0X9 1142 aa16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 CAVIN1Q6NZI2 390 aaKnown RBP16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 LMAN1P49257 510 aa16.52■□□□□ 0.24
ZC3H4-201ENST00000253048 PDIA4P13667 645 aaKnown RBP16.52■□□□□ 0.23
ZC3H4-201ENST00000253048 MAGEB6P1A0A0J9YX57 407 aa16.52■□□□□ 0.23
ZC3H4-201ENST00000253048 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.23
ZC3H4-201ENST00000253048 DPP8Q6V1X1 898 aaPredicted RBP16.52■□□□□ 0.23
ZC3H4-201ENST00000253048 CENPHQ9H3R5 247 aa16.52■□□□□ 0.23
ZC3H4-201ENST00000253048 C6orf50Q9HD87 102 aa16.52■□□□□ 0.23
ZC3H4-201ENST00000253048 SPDYE3A6NKU9 549 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 CALM1P0DP23 149 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 CALM2P0DP24 149 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 CALM3P0DP25 149 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 BIRC2Q13490 618 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 TMEM57Q8N5G2 664 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 KRT23Q9C075 422 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 PTPRCP08575 1304 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 GIGYF2Q6Y7W6 1299 aaKnown RBP16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 SPC25Q9HBM1 224 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 SLC5A4Q9NY91 659 aa16.51■□□□□ 0.23
ZC3H4-201ENST00000253048 SMARCA5O60264 1052 aaPredicted RBP16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 FLAD1Q8NFF5 587 aa16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 BACH1O14867 736 aa16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 KLHL10Q6JEL2 608 aa16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
ZC3H4-201ENST00000253048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms