RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 CNTNAP4Q9C0A0 1308 aa23.12■■□□□ 1.29
TNFSF9-201ENST00000245817 GPTP24298 496 aa23.11■■□□□ 1.29
TNFSF9-201ENST00000245817 G3BP1Q13283 466 aaKnown RBP eCLIP23.11■■□□□ 1.29
TNFSF9-201ENST00000245817 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
TNFSF9-201ENST00000245817 RHPN1Q8TCX5 695 aa23.11■■□□□ 1.29
TNFSF9-201ENST00000245817 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
TNFSF9-201ENST00000245817 PCCAP05165 728 aaPredicted RBP23.1■■□□□ 1.29
TNFSF9-201ENST00000245817 KCNQ4P56696 695 aa23.1■■□□□ 1.29
TNFSF9-201ENST00000245817 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
TNFSF9-201ENST00000245817 BMP2KLQ5H9B9 411 aa23.1■■□□□ 1.29
TNFSF9-201ENST00000245817 EPHA10Q5JZY3 1008 aa23.1■■□□□ 1.29
TNFSF9-201ENST00000245817 ZBTB38Q8NAP3 1195 aaPredicted RBP23.1■■□□□ 1.29
TNFSF9-201ENST00000245817 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
TNFSF9-201ENST00000245817 ZNF652Q9Y2D9 606 aa23.09■■□□□ 1.29
TNFSF9-201ENST00000245817 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
TNFSF9-201ENST00000245817 PLSCR1O15162 318 aa23.09■■□□□ 1.29
TNFSF9-201ENST00000245817 LMBR1LQ6UX01 489 aa23.09■■□□□ 1.29
TNFSF9-201ENST00000245817 NLRP10Q86W26 655 aa23.09■■□□□ 1.29
TNFSF9-201ENST00000245817 PA2G4Q9UQ80 394 aaKnown RBP23.08■■□□□ 1.29
TNFSF9-201ENST00000245817 IL1RAPL2Q9NP60 686 aa23.07■■□□□ 1.28
TNFSF9-201ENST00000245817 CAMTA2O94983 1202 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 BAG6P46379 1132 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 FOXO4P98177 505 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 TRMT112Q9UI30 125 aaKnown RBP23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 RPS6KA4O75676 772 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 ZNF34Q8IZ26 560 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 CLASRPQ8N2M8 674 aaKnown RBP23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 TNS1Q9HBL0 1735 aaKnown RBP23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 RREB1Q92766 1687 aa23.06■■□□□ 1.28
TNFSF9-201ENST00000245817 HMGB2P26583 209 aaKnown RBP23.05■■□□□ 1.28
TNFSF9-201ENST00000245817 TTC22Q5TAA0 569 aa23.05■■□□□ 1.28
TNFSF9-201ENST00000245817 RTCBQ9Y3I0 505 aaKnown RBP23.05■■□□□ 1.28
TNFSF9-201ENST00000245817 GNPATO15228 680 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 MX1P20591 662 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 PDE1AP54750 535 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 PARP10Q53GL7 1025 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 SIL1Q9H173 461 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 OSBPL3Q9H4L5 887 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 COPRSQ9NQ92 184 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 COL5A3P25940 1745 aaPredicted RBP23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
TNFSF9-201ENST00000245817 EN1Q05925 392 aaPredicted RBP23.03■■□□□ 1.28
TNFSF9-201ENST00000245817 CLEC4GQ6UXB4 293 aa23.03■■□□□ 1.28
TNFSF9-201ENST00000245817 PLA2G12BQ9BX93 195 aa23.03■■□□□ 1.28
TNFSF9-201ENST00000245817 UPF2Q9HAU5 1272 aaKnown RBP23.03■■□□□ 1.28
TNFSF9-201ENST00000245817 SLC27A3Q5K4L6 730 aa23.02■■□□□ 1.28
TNFSF9-201ENST00000245817 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
TNFSF9-201ENST00000245817 AK7Q96M32 723 aa23.02■■□□□ 1.28
TNFSF9-201ENST00000245817 NIP7Q9Y221 180 aaKnown RBP eCLIP23.02■■□□□ 1.28
TNFSF9-201ENST00000245817 MYH14Q7Z406 1995 aaKnown RBP23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 ANP32AP39687 249 aaKnown RBP23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 RFX5P48382 616 aaPredicted RBP23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 PTPN12Q05209 780 aaKnown RBP23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 CCDC57Q2TAC2 916 aa23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 KLHDC4Q8TBB5 520 aa23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 UTP14AQ9BVJ6 771 aaKnown RBP23.01■■□□□ 1.27
TNFSF9-201ENST00000245817 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
TNFSF9-201ENST00000245817 RGL2O15211 777 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 ZPR1O75312 459 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 HSP90B1P14625 803 aaKnown RBP23■■□□□ 1.27
TNFSF9-201ENST00000245817 NUTM1Q86Y26 1132 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 CAMKK2Q96RR4 588 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 UBN2Q6ZU65 1347 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 IFIT2P09913 472 aaKnown RBP23■■□□□ 1.27
TNFSF9-201ENST00000245817 TXNRD1Q16881 649 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 STAP2Q9UGK3 403 aa23■■□□□ 1.27
TNFSF9-201ENST00000245817 GSPT1P15170 499 aaKnown RBP22.99■■□□□ 1.27
TNFSF9-201ENST00000245817 EZH2Q15910 746 aaKnown RBP22.99■■□□□ 1.27
TNFSF9-201ENST00000245817 PROM2Q8N271 834 aa22.99■■□□□ 1.27
TNFSF9-201ENST00000245817 GPATCH3Q96I76 525 aa22.99■■□□□ 1.27
TNFSF9-201ENST00000245817 AOX1Q06278 1338 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 SALL3Q9BXA9 1300 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 NUP98P52948 1817 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 LY75O60449 1722 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 PDE8AO60658 829 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 SUSD4Q5VX71 490 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 NARFQ9UHQ1 456 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
TNFSF9-201ENST00000245817 FAM177BA6PVY3 158 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 EIF5BO60841 1220 aaKnown RBP22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 SASH1O94885 1247 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 TAF7LQ5H9L4 462 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 ANKRD36CQ5JPF3 1778 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 CDC45O75419 566 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 CSF1RP07333 972 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 IFIT5Q13325 482 aaKnown RBP22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 TRAPPC3LQ5T215 181 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 CASC1Q6TDU7 716 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 AACSQ86V21 672 aa22.97■■□□□ 1.27
TNFSF9-201ENST00000245817 RFC4P35249 363 aa22.96■■□□□ 1.27
TNFSF9-201ENST00000245817 CTSWP56202 376 aa22.96■■□□□ 1.27
TNFSF9-201ENST00000245817 SYNE4Q8N205 404 aa22.96■■□□□ 1.27
TNFSF9-201ENST00000245817 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
TNFSF9-201ENST00000245817 RGPD3A6NKT7 1758 aaPredicted RBP22.95■■□□□ 1.27
TNFSF9-201ENST00000245817 RGPD4Q7Z3J3 1758 aa22.95■■□□□ 1.27
TNFSF9-201ENST00000245817 USPL1Q5W0Q7 1092 aa22.95■■□□□ 1.26
TNFSF9-201ENST00000245817 ERC2O15083 957 aa22.94■■□□□ 1.26
TNFSF9-201ENST00000245817 SDSP20132 328 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms