RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ALDH1L1O75891 902 aa25.47■■□□□ 1.67
SNRPA-201ENST00000243563 TRIM28Q13263 835 aaKnown RBP25.47■■□□□ 1.67
SNRPA-201ENST00000243563 USP44Q9H0E7 712 aa25.47■■□□□ 1.67
SNRPA-201ENST00000243563 FAM177BA6PVY3 158 aa25.46■■□□□ 1.67
SNRPA-201ENST00000243563 DDR1Q08345 913 aa25.46■■□□□ 1.67
SNRPA-201ENST00000243563 SYNE4Q8N205 404 aa25.46■■□□□ 1.67
SNRPA-201ENST00000243563 NRXN2Q9P2S2 1712 aa25.45■■□□□ 1.67
SNRPA-201ENST00000243563 ZBTB7BO15156 539 aaPredicted RBP25.45■■□□□ 1.67
SNRPA-201ENST00000243563 TM4SF1P30408 202 aa25.45■■□□□ 1.67
SNRPA-201ENST00000243563 CWC25Q9NXE8 425 aaPredicted RBP25.45■■□□□ 1.67
SNRPA-201ENST00000243563 LAMB2P55268 1798 aa25.45■■□□□ 1.66
SNRPA-201ENST00000243563 NBPF7P0C2Y1 421 aaPredicted RBP25.45■■□□□ 1.66
SNRPA-201ENST00000243563 RTL5Q5HYW3 569 aaPredicted RBP25.45■■□□□ 1.66
SNRPA-201ENST00000243563 CCDC191Q8NCU4 936 aa25.45■■□□□ 1.66
SNRPA-201ENST00000243563 NTSR2O95665 410 aa25.43■■□□□ 1.66
SNRPA-201ENST00000243563 CASP7P55210 303 aa25.43■■□□□ 1.66
SNRPA-201ENST00000243563 TNRC6CQ9HCJ0 1690 aaKnown RBP25.42■■□□□ 1.66
SNRPA-201ENST00000243563 GRM8O00222 908 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 ZBTB7AO95365 584 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 SETDB2Q96T68 719 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 DDX19BQ9UMR2 479 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 IBTKQ9P2D0 1353 aaPredicted RBP25.41■■□□□ 1.66
SNRPA-201ENST00000243563 CARMIL3Q8ND23 1372 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 UTYO14607 1347 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 H7C1W4 665 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 POLRMTO00411 1230 aaKnown RBP25.41■■□□□ 1.66
SNRPA-201ENST00000243563 UBE3BQ7Z3V4 1068 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 NUTM1Q86Y26 1132 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 CCDC24Q8N4L8 307 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 FAM89AQ96GI7 184 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 C1orf115Q9H7X2 142 aa25.41■■□□□ 1.66
SNRPA-201ENST00000243563 ANKRD31Q8N7Z5 1873 aa25.4■■□□□ 1.66
SNRPA-201ENST00000243563 PARP10Q53GL7 1025 aa25.4■■□□□ 1.66
SNRPA-201ENST00000243563 NLGN1Q8N2Q7 840 aa25.4■■□□□ 1.66
SNRPA-201ENST00000243563 MYH3P11055 1940 aa25.4■■□□□ 1.66
SNRPA-201ENST00000243563 ABCC12Q96J65 1359 aa25.39■■□□□ 1.66
SNRPA-201ENST00000243563 MMP10P09238 476 aa25.39■■□□□ 1.66
SNRPA-201ENST00000243563 KAZALD1Q96I82 304 aa25.39■■□□□ 1.66
SNRPA-201ENST00000243563 ZBTB40Q9NUA8 1239 aa25.39■■□□□ 1.66
SNRPA-201ENST00000243563 C9orf78Q9NZ63 289 aaPredicted RBP25.39■■□□□ 1.66
SNRPA-201ENST00000243563 TRMT112Q9UI30 125 aaKnown RBP25.39■■□□□ 1.66
SNRPA-201ENST00000243563 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
SNRPA-201ENST00000243563 ZBTB38Q8NAP3 1195 aaPredicted RBP25.37■■□□□ 1.65
SNRPA-201ENST00000243563 SUCLG2Q96I99 432 aa25.37■■□□□ 1.65
SNRPA-201ENST00000243563 UTP14AQ9BVJ6 771 aaKnown RBP25.37■■□□□ 1.65
SNRPA-201ENST00000243563 ERFEQ4G0M1 354 aa25.37■■□□□ 1.65
SNRPA-201ENST00000243563 EPHA10Q5JZY3 1008 aa25.37■■□□□ 1.65
SNRPA-201ENST00000243563 ATF5Q9Y2D1 282 aaPredicted RBP25.37■■□□□ 1.65
SNRPA-201ENST00000243563 SERPINB2P05120 415 aa25.36■■□□□ 1.65
SNRPA-201ENST00000243563 SLC16A10Q8TF71 515 aa25.36■■□□□ 1.65
SNRPA-201ENST00000243563 PPP1R42Q7Z4L9 355 aa25.35■■□□□ 1.65
SNRPA-201ENST00000243563 NBPF5PQ86XG9 351 aaPredicted RBP25.35■■□□□ 1.65
SNRPA-201ENST00000243563 LRRFIP2Q9Y608 721 aaKnown RBP25.35■■□□□ 1.65
SNRPA-201ENST00000243563 NEFLP07196 543 aa25.34■■□□□ 1.65
SNRPA-201ENST00000243563 UBTFL1P0CB47 393 aaPredicted RBP25.34■■□□□ 1.65
SNRPA-201ENST00000243563 PRR5LQ6MZQ0 368 aa25.34■■□□□ 1.65
SNRPA-201ENST00000243563 SH3TC1Q8TE82 1336 aa25.33■■□□□ 1.65
SNRPA-201ENST00000243563 HCLS1P14317 486 aaPredicted RBP25.33■■□□□ 1.65
SNRPA-201ENST00000243563 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
SNRPA-201ENST00000243563 MTFR1LQ9H019 292 aa25.33■■□□□ 1.65
SNRPA-201ENST00000243563 COL4A1P02462 1669 aa25.32■■□□□ 1.64
SNRPA-201ENST00000243563 CDHR2Q9BYE9 1310 aa25.32■■□□□ 1.64
SNRPA-201ENST00000243563 GNAI3P08754 354 aa25.32■■□□□ 1.64
SNRPA-201ENST00000243563 TAF1P21675 1872 aa25.32■■□□□ 1.64
SNRPA-201ENST00000243563 IRS4O14654 1257 aaPredicted RBP25.31■■□□□ 1.64
SNRPA-201ENST00000243563 FOXO4P98177 505 aa25.31■■□□□ 1.64
SNRPA-201ENST00000243563 ANKRD44Q8N8A2 993 aa25.31■■□□□ 1.64
SNRPA-201ENST00000243563 BICC1Q9H694 974 aaKnown RBP25.31■■□□□ 1.64
SNRPA-201ENST00000243563 PCDHB15Q9Y5E8 787 aa25.31■■□□□ 1.64
SNRPA-201ENST00000243563 COL11A2P13942 1736 aaPredicted RBP25.31■■□□□ 1.64
SNRPA-201ENST00000243563 CNBD1Q8NA66 436 aa25.3■■□□□ 1.64
SNRPA-201ENST00000243563 SGIP1Q9BQI5 828 aa25.3■■□□□ 1.64
SNRPA-201ENST00000243563 NYXQ9GZU5 481 aa25.3■■□□□ 1.64
SNRPA-201ENST00000243563 PARP3Q9Y6F1 533 aa25.3■■□□□ 1.64
SNRPA-201ENST00000243563 TPTE2Q6XPS3 522 aa25.3■■□□□ 1.64
SNRPA-201ENST00000243563 GNAI2P04899 355 aa25.29■■□□□ 1.64
SNRPA-201ENST00000243563 KIF13BQ9NQT8 1826 aa25.28■■□□□ 1.64
SNRPA-201ENST00000243563 PTGER2P43116 358 aa25.27■■□□□ 1.64
SNRPA-201ENST00000243563 SIRT2Q8IXJ6 389 aa25.27■■□□□ 1.64
SNRPA-201ENST00000243563 PLA2G12BQ9BX93 195 aa25.27■■□□□ 1.64
SNRPA-201ENST00000243563 SPEF2Q9C093 1822 aa25.27■■□□□ 1.64
SNRPA-201ENST00000243563 GTF2E1P29083 439 aaPredicted RBP25.26■■□□□ 1.63
SNRPA-201ENST00000243563 SLC10A5Q5PT55 438 aa25.26■■□□□ 1.63
SNRPA-201ENST00000243563 KIAA1551Q9HCM1 1747 aa25.26■■□□□ 1.63
SNRPA-201ENST00000243563 CEP85Q6P2H3 762 aa25.26■■□□□ 1.63
SNRPA-201ENST00000243563 CCDC85AQ96PX6 553 aaPredicted RBP25.26■■□□□ 1.63
SNRPA-201ENST00000243563 RIC1Q4ADV7 1423 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 PNMA6EA0A0J9YXQ4 647 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 NPHP1O15259 732 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 PDE8AO60658 829 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 CTSWP56202 376 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
SNRPA-201ENST00000243563 LMBR1LQ6UX01 489 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 C10orf71Q711Q0 1435 aa25.24■■□□□ 1.63
SNRPA-201ENST00000243563 ST5P78524 1137 aa25.23■■□□□ 1.63
SNRPA-201ENST00000243563 TTLL11Q8NHH1 800 aa25.23■■□□□ 1.63
SNRPA-201ENST00000243563 CHMP4BQ9H444 224 aaKnown RBP25.23■■□□□ 1.63
SNRPA-201ENST00000243563 CACNA1SQ13698 1873 aa25.22■■□□□ 1.63
SNRPA-201ENST00000243563 CSF1RP07333 972 aa25.22■■□□□ 1.63
SNRPA-201ENST00000243563 FAM161AQ3B820 660 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms