RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
LTBP4-202ENST00000243562 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
LTBP4-202ENST00000243562 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
LTBP4-202ENST00000243562 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
LTBP4-202ENST00000243562 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
LTBP4-202ENST00000243562 PSMA5P28066 241 aa16.9■□□□□ 0.3
LTBP4-202ENST00000243562 CACNA1FO60840 1977 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 CCDC192P0DO97 292 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 KRT85P78386 507 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 STK3Q13188 491 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 MTX1Q13505 466 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 NWD1Q149M9 1564 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 BLOC1S2Q6QNY1 142 aa16.89■□□□□ 0.29
LTBP4-202ENST00000243562 EAF2Q96CJ1 260 aaPredicted RBP16.89■□□□□ 0.29
LTBP4-202ENST00000243562 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
LTBP4-202ENST00000243562 TSC1Q92574 1164 aa16.88■□□□□ 0.29
LTBP4-202ENST00000243562 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
LTBP4-202ENST00000243562 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
LTBP4-202ENST00000243562 HIP1O00291 1037 aa16.88■□□□□ 0.29
LTBP4-202ENST00000243562 RNMTO43148 476 aaKnown RBP16.88■□□□□ 0.29
LTBP4-202ENST00000243562 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
LTBP4-202ENST00000243562 TFIP11Q9UBB9 837 aaKnown RBP16.88■□□□□ 0.29
LTBP4-202ENST00000243562 SLC27A2O14975 620 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 GIGYF1O75420 1035 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-202ENST00000243562 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
LTBP4-202ENST00000243562 GRM8O00222 908 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 SASH1O94885 1247 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 ST3GAL1Q11201 340 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 CDC37L1Q7L3B6 337 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
LTBP4-202ENST00000243562 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
LTBP4-202ENST00000243562 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 KLHDC4Q8TBB5 520 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 MAP4K1Q92918 833 aa16.87■□□□□ 0.29
LTBP4-202ENST00000243562 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
LTBP4-202ENST00000243562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-202ENST00000243562 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
LTBP4-202ENST00000243562 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
LTBP4-202ENST00000243562 PDCP20941 246 aa16.86■□□□□ 0.29
LTBP4-202ENST00000243562 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
LTBP4-202ENST00000243562 CKAP2LQ8IYA6 745 aa16.86■□□□□ 0.29
LTBP4-202ENST00000243562 FUCA2Q9BTY2 467 aa16.86■□□□□ 0.29
LTBP4-202ENST00000243562 A0A0D9SFI3 127 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
LTBP4-202ENST00000243562 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
LTBP4-202ENST00000243562 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 BBXQ8WY36 941 aaPredicted RBP16.85■□□□□ 0.29
LTBP4-202ENST00000243562 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 AP5Z1O43299 807 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 FAM177BA6PVY3 158 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 LIG1P18858 919 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 DRC7Q8IY82 874 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
LTBP4-202ENST00000243562 MYL6BP14649 208 aa16.84■□□□□ 0.29
LTBP4-202ENST00000243562 KCNB2Q92953 911 aa16.84■□□□□ 0.29
LTBP4-202ENST00000243562 ANKRD1Q15327 319 aa16.84■□□□□ 0.29
LTBP4-202ENST00000243562 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
LTBP4-202ENST00000243562 TNMDQ9H2S6 317 aa16.84■□□□□ 0.29
LTBP4-202ENST00000243562 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
LTBP4-202ENST00000243562 EDC3Q96F86 508 aaKnown RBP16.83■□□□□ 0.29
LTBP4-202ENST00000243562 TAF6LQ9Y6J9 622 aa16.83■□□□□ 0.29
LTBP4-202ENST00000243562 LARP1Q6PKG0 1096 aaKnown RBP16.83■□□□□ 0.28
LTBP4-202ENST00000243562 DACT1Q9NYF0 836 aa16.83■□□□□ 0.28
LTBP4-202ENST00000243562 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 LUZP1Q86V48 1076 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 KAZALD1Q96I82 304 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
LTBP4-202ENST00000243562 RPS6KB1P23443 525 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 TYRO3Q06418 890 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
LTBP4-202ENST00000243562 FAM200AQ8TCP9 573 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
LTBP4-202ENST00000243562 SCAND2PQ9GZW5 306 aaPredicted RBP16.81■□□□□ 0.28
LTBP4-202ENST00000243562 CCDC9Q9Y3X0 531 aaKnown RBP16.81■□□□□ 0.28
LTBP4-202ENST00000243562 TPM3P06753 285 aa16.81■□□□□ 0.28
LTBP4-202ENST00000243562 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
LTBP4-202ENST00000243562 ZNF589Q86UQ0 364 aaPredicted RBP16.81■□□□□ 0.28
LTBP4-202ENST00000243562 ANKRD24Q8TF21 1146 aa16.81■□□□□ 0.28
LTBP4-202ENST00000243562 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
LTBP4-202ENST00000243562 KIF3AQ9Y496 699 aa16.81■□□□□ 0.28
LTBP4-202ENST00000243562 GCP02774 474 aa16.8■□□□□ 0.28
LTBP4-202ENST00000243562 ANO6Q4KMQ2 910 aa16.8■□□□□ 0.28
LTBP4-202ENST00000243562 KCNF1Q9H3M0 494 aa16.8■□□□□ 0.28
LTBP4-202ENST00000243562 SPTLC3Q9NUV7 552 aa16.8■□□□□ 0.28
LTBP4-202ENST00000243562 NDUFB9Q9Y6M9 179 aa16.8■□□□□ 0.28
LTBP4-202ENST00000243562 H3BQV1 296 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 MYD88Q99836 296 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 MRVI1Q9Y6F6 885 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 PTGS1P23219 599 aa16.79■□□□□ 0.28
LTBP4-202ENST00000243562 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms