RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 RAD50Q92878 1312 aa18.99■□□□□ 0.63
PDE1B-201ENST00000243052 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
PDE1B-201ENST00000243052 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
PDE1B-201ENST00000243052 TTC6Q86TZ1 520 aa18.99■□□□□ 0.63
PDE1B-201ENST00000243052 RPAP1Q9BWH6 1393 aaPredicted RBP18.99■□□□□ 0.63
PDE1B-201ENST00000243052 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
PDE1B-201ENST00000243052 CWC27Q6UX04 472 aaKnown RBP18.98■□□□□ 0.63
PDE1B-201ENST00000243052 LRRC8AQ8IWT6 810 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 EYA1Q99502 592 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 IL25Q9H293 177 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 LIMCH1Q9UPQ0 1083 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 ANKRD65E5RJM6 399 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
PDE1B-201ENST00000243052 TPM4P67936 248 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 SNW1Q13573 536 aaKnown RBP18.98■□□□□ 0.63
PDE1B-201ENST00000243052 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 DRC1Q96MC2 740 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
PDE1B-201ENST00000243052 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
PDE1B-201ENST00000243052 SLC20A2Q08357 652 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 ZSCAN26Q16670 478 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 SPATA32Q96LK8 384 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 TCEANC2Q96MN5 208 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
PDE1B-201ENST00000243052 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.97■□□□□ 0.63
PDE1B-201ENST00000243052 STK3Q13188 491 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 ERCC4Q92889 916 aaPredicted RBP18.97■□□□□ 0.63
PDE1B-201ENST00000243052 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
PDE1B-201ENST00000243052 ARGLU1Q9NWB6 273 aaPredicted RBP18.97■□□□□ 0.63
PDE1B-201ENST00000243052 MYO1CO00159 1063 aa18.97■□□□□ 0.63
PDE1B-201ENST00000243052 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
PDE1B-201ENST00000243052 SRGAP3O43295 1099 aa18.96■□□□□ 0.63
PDE1B-201ENST00000243052 ATP7BP35670 1465 aa18.96■□□□□ 0.63
PDE1B-201ENST00000243052 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
PDE1B-201ENST00000243052 RUFY3Q7L099 469 aa18.95■□□□□ 0.62
PDE1B-201ENST00000243052 TMEM87AQ8NBN3 555 aa18.95■□□□□ 0.62
PDE1B-201ENST00000243052 JAKMIP1Q96N16 626 aaKnown RBP18.95■□□□□ 0.62
PDE1B-201ENST00000243052 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
PDE1B-201ENST00000243052 TXLNBQ8N3L3 684 aa18.95■□□□□ 0.62
PDE1B-201ENST00000243052 URI1O94763 535 aaPredicted RBP18.94■□□□□ 0.62
PDE1B-201ENST00000243052 PPP1R42Q7Z4L9 355 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 RASEFQ8IZ41 740 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 MTMR6Q9Y217 621 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 NEO1Q92859 1461 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 OAS2P29728 719 aaKnown RBP18.94■□□□□ 0.62
PDE1B-201ENST00000243052 DNAI1Q9UI46 699 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 RGS12O14924 1447 aa18.94■□□□□ 0.62
PDE1B-201ENST00000243052 DHX16O60231 1041 aaKnown RBP18.93■□□□□ 0.62
PDE1B-201ENST00000243052 PLA2G4AP47712 749 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 ANAPC15P60006 121 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 GOLGA6L1Q8N7Z2 621 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 KIF1BPQ96EK5 621 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 FHOD1Q9Y613 1164 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
PDE1B-201ENST00000243052 NR1I2O75469 434 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 SMC2O95347 1197 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 ATP8B2P98198 1209 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 SART3Q15020 963 aaKnown RBP18.93■□□□□ 0.62
PDE1B-201ENST00000243052 TEX2Q8IWB9 1127 aa18.93■□□□□ 0.62
PDE1B-201ENST00000243052 CWC15Q9P013 229 aaKnown RBP18.93■□□□□ 0.62
PDE1B-201ENST00000243052 CDC37L1Q7L3B6 337 aa18.92■□□□□ 0.62
PDE1B-201ENST00000243052 GNAT3A8MTJ3 354 aa18.92■□□□□ 0.62
PDE1B-201ENST00000243052 TMEM131LA2VDJ0 1609 aa18.92■□□□□ 0.62
PDE1B-201ENST00000243052 SNX14Q9Y5W7 946 aa18.91■□□□□ 0.62
PDE1B-201ENST00000243052 E2F4Q16254 413 aa18.91■□□□□ 0.62
PDE1B-201ENST00000243052 PDRG1Q9NUG6 133 aa18.91■□□□□ 0.62
PDE1B-201ENST00000243052 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
PDE1B-201ENST00000243052 PLA2G4DQ86XP0 818 aa18.91■□□□□ 0.62
PDE1B-201ENST00000243052 A2ML1A8K2U0 1454 aa18.91■□□□□ 0.62
PDE1B-201ENST00000243052 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
PDE1B-201ENST00000243052 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
PDE1B-201ENST00000243052 ABTB2Q8N961 1025 aa18.9■□□□□ 0.62
PDE1B-201ENST00000243052 ZSWIM4Q9H7M6 989 aa18.9■□□□□ 0.62
PDE1B-201ENST00000243052 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
PDE1B-201ENST00000243052 ZRSR1Q15695 479 aaKnown RBP18.9■□□□□ 0.62
PDE1B-201ENST00000243052 DDX11Q96FC9 970 aa18.9■□□□□ 0.62
PDE1B-201ENST00000243052 CASQ1P31415 396 aa18.9■□□□□ 0.62
PDE1B-201ENST00000243052 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
PDE1B-201ENST00000243052 HDAC5Q9UQL6 1122 aa18.89■□□□□ 0.61
PDE1B-201ENST00000243052 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
PDE1B-201ENST00000243052 USP44Q9H0E7 712 aa18.89■□□□□ 0.61
PDE1B-201ENST00000243052 KIAA0232Q92628 1395 aa18.89■□□□□ 0.61
PDE1B-201ENST00000243052 AK7Q96M32 723 aa18.88■□□□□ 0.61
PDE1B-201ENST00000243052 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
PDE1B-201ENST00000243052 AMOTL2Q9Y2J4 779 aa18.88■□□□□ 0.61
PDE1B-201ENST00000243052 NBPF7P0C2Y1 421 aaPredicted RBP18.88■□□□□ 0.61
PDE1B-201ENST00000243052 EP400NLQ6ZTU2 488 aa18.88■□□□□ 0.61
PDE1B-201ENST00000243052 C11orf57Q6ZUT1 292 aaPredicted RBP18.88■□□□□ 0.61
PDE1B-201ENST00000243052 CARD6Q9BX69 1037 aa18.88■□□□□ 0.61
PDE1B-201ENST00000243052 RHPN1Q8TCX5 695 aa18.87■□□□□ 0.61
PDE1B-201ENST00000243052 RRP15Q9Y3B9 282 aaKnown RBP18.87■□□□□ 0.61
PDE1B-201ENST00000243052 HSPA4P34932 840 aa18.87■□□□□ 0.61
PDE1B-201ENST00000243052 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
PDE1B-201ENST00000243052 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
PDE1B-201ENST00000243052 TMC6Q7Z403 805 aa18.87■□□□□ 0.61
PDE1B-201ENST00000243052 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
PDE1B-201ENST00000243052 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
PDE1B-201ENST00000243052 LTKP29376 864 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms