RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 DNAJC2Q99543 621 aaKnown RBP20.2■□□□□ 0.82
SSPN-201ENST00000242729 USP25Q9UHP3 1055 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 CACNA1FO60840 1977 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
SSPN-201ENST00000242729 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.19■□□□□ 0.82
SSPN-201ENST00000242729 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
SSPN-201ENST00000242729 F13A1P00488 732 aa20.19■□□□□ 0.82
SSPN-201ENST00000242729 FOSBP53539 338 aa20.19■□□□□ 0.82
SSPN-201ENST00000242729 MTX1Q13505 466 aa20.19■□□□□ 0.82
SSPN-201ENST00000242729 SEC62Q99442 399 aaKnown RBP20.19■□□□□ 0.82
SSPN-201ENST00000242729 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.19■□□□□ 0.82
SSPN-201ENST00000242729 ADGRL3Q9HAR2 1447 aa20.18■□□□□ 0.82
SSPN-201ENST00000242729 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
SSPN-201ENST00000242729 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
SSPN-201ENST00000242729 PDLIM2Q96JY6 352 aa20.18■□□□□ 0.82
SSPN-201ENST00000242729 ARID3AQ99856 593 aa20.18■□□□□ 0.82
SSPN-201ENST00000242729 ERBB3P21860 1342 aa20.18■□□□□ 0.82
SSPN-201ENST00000242729 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
SSPN-201ENST00000242729 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
SSPN-201ENST00000242729 RBM10P98175 930 aaKnown RBP20.17■□□□□ 0.82
SSPN-201ENST00000242729 NECTIN1Q15223 517 aa20.17■□□□□ 0.82
SSPN-201ENST00000242729 SLC27A2O14975 620 aa20.17■□□□□ 0.82
SSPN-201ENST00000242729 TFCP2Q12800 502 aa20.17■□□□□ 0.82
SSPN-201ENST00000242729 GCKRQ14397 625 aa20.17■□□□□ 0.82
SSPN-201ENST00000242729 C17orf53Q8N3J3 647 aaPredicted RBP20.17■□□□□ 0.82
SSPN-201ENST00000242729 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
SSPN-201ENST00000242729 SYAP1Q96A49 352 aaPredicted RBP20.16■□□□□ 0.82
SSPN-201ENST00000242729 CAMK4Q16566 473 aa20.16■□□□□ 0.82
SSPN-201ENST00000242729 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
SSPN-201ENST00000242729 ZSWIM6Q9HCJ5 1215 aa20.16■□□□□ 0.82
SSPN-201ENST00000242729 TFIP11Q9UBB9 837 aaKnown RBP20.16■□□□□ 0.82
SSPN-201ENST00000242729 MTMR6Q9Y217 621 aa20.16■□□□□ 0.82
SSPN-201ENST00000242729 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
SSPN-201ENST00000242729 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
SSPN-201ENST00000242729 ANKRD13DQ6ZTN6 518 aa20.15■□□□□ 0.82
SSPN-201ENST00000242729 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
SSPN-201ENST00000242729 NOL7Q9UMY1 257 aaKnown RBP20.15■□□□□ 0.82
SSPN-201ENST00000242729 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
SSPN-201ENST00000242729 KDM3BQ7LBC6 1761 aa20.15■□□□□ 0.82
SSPN-201ENST00000242729 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.82
SSPN-201ENST00000242729 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.82
SSPN-201ENST00000242729 LARP1BQ659C4 914 aaKnown RBP20.14■□□□□ 0.82
SSPN-201ENST00000242729 LARP1Q6PKG0 1096 aaKnown RBP20.14■□□□□ 0.82
SSPN-201ENST00000242729 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.82
SSPN-201ENST00000242729 VPS53Q5VIR6 699 aa20.14■□□□□ 0.81
SSPN-201ENST00000242729 DBNLQ9UJU6 430 aaKnown RBP20.14■□□□□ 0.81
SSPN-201ENST00000242729 PHKG2P15735 406 aa20.13■□□□□ 0.81
SSPN-201ENST00000242729 DDX11Q96FC9 970 aa20.13■□□□□ 0.81
SSPN-201ENST00000242729 TATP17735 454 aaPredicted RBP20.13■□□□□ 0.81
SSPN-201ENST00000242729 A0A087WZG4 1122 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 DBNDD2Q9BQY9 259 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 MAP4K1Q92918 833 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 IL17RAQ96F46 866 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 NEUROD6Q96NK8 337 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 ZKSCAN5Q9Y2L8 839 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 CYP27B1O15528 508 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 CCDC183Q5T5S1 534 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
SSPN-201ENST00000242729 CCDC85AQ96PX6 553 aaPredicted RBP20.12■□□□□ 0.81
SSPN-201ENST00000242729 CHD2O14647 1828 aaKnown RBP20.11■□□□□ 0.81
SSPN-201ENST00000242729 HSP90AA2PQ14568 343 aaPredicted RBP20.11■□□□□ 0.81
SSPN-201ENST00000242729 TTC12Q9H892 705 aaPredicted RBP20.11■□□□□ 0.81
SSPN-201ENST00000242729 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
SSPN-201ENST00000242729 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
SSPN-201ENST00000242729 OFD1O75665 1012 aa20.11■□□□□ 0.81
SSPN-201ENST00000242729 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
SSPN-201ENST00000242729 JAK2O60674 1132 aa20.1■□□□□ 0.81
SSPN-201ENST00000242729 UBE2HP62256 183 aa20.1■□□□□ 0.81
SSPN-201ENST00000242729 METTL22Q9BUU2 404 aaPredicted RBP20.1■□□□□ 0.81
SSPN-201ENST00000242729 NAP1L2Q9ULW6 460 aaPredicted RBP20.1■□□□□ 0.81
SSPN-201ENST00000242729 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.1■□□□□ 0.81
SSPN-201ENST00000242729 CEBPZQ03701 1054 aaKnown RBP20.1■□□□□ 0.81
SSPN-201ENST00000242729 RGPD5Q99666 1765 aa20.1■□□□□ 0.81
SSPN-201ENST00000242729 A0A0G2JLW4 131 aa20.09■□□□□ 0.81
SSPN-201ENST00000242729 PHF14O94880 888 aa20.09■□□□□ 0.81
SSPN-201ENST00000242729 ADCY5O95622 1261 aa20.09■□□□□ 0.81
SSPN-201ENST00000242729 PTPN12Q05209 780 aaKnown RBP20.09■□□□□ 0.81
SSPN-201ENST00000242729 LMBR1LQ6UX01 489 aa20.09■□□□□ 0.81
SSPN-201ENST00000242729 COL15A1P39059 1388 aa20.08■□□□□ 0.81
SSPN-201ENST00000242729 HSP90B1P14625 803 aaKnown RBP20.08■□□□□ 0.81
SSPN-201ENST00000242729 TIMM10P62072 90 aa20.08■□□□□ 0.81
SSPN-201ENST00000242729 CKAP2LQ8IYA6 745 aa20.08■□□□□ 0.81
SSPN-201ENST00000242729 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.81
SSPN-201ENST00000242729 CCDC39Q9UFE4 941 aa20.08■□□□□ 0.81
SSPN-201ENST00000242729 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.81
SSPN-201ENST00000242729 CABP4P57796 275 aa20.08■□□□□ 0.8
SSPN-201ENST00000242729 TNNI3KQ59H18 835 aa20.08■□□□□ 0.8
SSPN-201ENST00000242729 SPC24Q8NBT2 197 aa20.08■□□□□ 0.8
SSPN-201ENST00000242729 FPGT-TNNI3KV9GXZ4 949 aa20.08■□□□□ 0.8
SSPN-201ENST00000242729 LMO7Q8WWI1 1683 aa20.07■□□□□ 0.8
SSPN-201ENST00000242729 TOB2Q14106 344 aaPredicted RBP20.07■□□□□ 0.8
SSPN-201ENST00000242729 TTC6Q86TZ1 520 aa20.07■□□□□ 0.8
SSPN-201ENST00000242729 ZBTB3Q9H5J0 574 aa20.07■□□□□ 0.8
SSPN-201ENST00000242729 MEGF6O75095 1541 aa20.07■□□□□ 0.8
SSPN-201ENST00000242729 N4BP2Q86UW6 1770 aaPredicted RBP20.07■□□□□ 0.8
SSPN-201ENST00000242729 DNTTIP2Q5QJE6 756 aaKnown RBP20.07■□□□□ 0.8
SSPN-201ENST00000242729 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms