RNA–Protein interactions for RNA: ENST00000238558.4

GSC-201, Transcript of goosecoid homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSC, Length 1,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSC-201ENST00000238558 TCIRG1Q13488 830 aa33.79■■■■□ 3
GSC-201ENST00000238558 WWC1Q8IX03 1113 aa33.79■■■■□ 3
GSC-201ENST00000238558 HYPKQ9NX55 129 aa33.79■■■■□ 3
GSC-201ENST00000238558 KDM2BQ8NHM5 1336 aa33.79■■■■□ 3
GSC-201ENST00000238558 C8orf58Q8NAV2 365 aa33.78■■■■□ 3
GSC-201ENST00000238558 NLRP10Q86W26 655 aa33.77■■■■□ 3
GSC-201ENST00000238558 PLBD2Q8NHP8 589 aa33.77■■■■□ 3
GSC-201ENST00000238558 CCDC93Q567U6 631 aa33.76■■■□□ 2.99
GSC-201ENST00000238558 ANKRD13DQ6ZTN6 518 aa33.76■■■□□ 2.99
GSC-201ENST00000238558 HOXA10P31260 410 aaPredicted RBP33.75■■■□□ 2.99
GSC-201ENST00000238558 NCBP3Q53F19 620 aaKnown RBP33.75■■■□□ 2.99
GSC-201ENST00000238558 C3orf67Q6ZVT6 689 aa33.75■■■□□ 2.99
GSC-201ENST00000238558 RPGRQ92834 1020 aaKnown RBP33.75■■■□□ 2.99
GSC-201ENST00000238558 SLC10A5Q5PT55 438 aa33.74■■■□□ 2.99
GSC-201ENST00000238558 OLFM4Q6UX06 510 aa33.74■■■□□ 2.99
GSC-201ENST00000238558 ANKRD36CQ5JPF3 1778 aa33.74■■■□□ 2.99
GSC-201ENST00000238558 TSR2Q969E8 191 aaKnown RBP33.73■■■□□ 2.99
GSC-201ENST00000238558 RNF123Q5XPI4 1314 aa33.73■■■□□ 2.99
GSC-201ENST00000238558 NLRP3Q96P20 1036 aa33.72■■■□□ 2.99
GSC-201ENST00000238558 GLTPD2A6NH11 291 aa33.71■■■□□ 2.99
GSC-201ENST00000238558 RRAGCQ9HB90 399 aa33.71■■■□□ 2.99
GSC-201ENST00000238558 TIAM2Q8IVF5 1701 aa33.7■■■□□ 2.99
GSC-201ENST00000238558 TOMM70O94826 608 aa33.7■■■□□ 2.99
GSC-201ENST00000238558 TSPYL6Q8N831 410 aa33.7■■■□□ 2.99
GSC-201ENST00000238558 RBM17Q96I25 401 aaKnown RBP33.7■■■□□ 2.99
GSC-201ENST00000238558 TRMT112Q9UI30 125 aaKnown RBP33.7■■■□□ 2.99
GSC-201ENST00000238558 RTKN2Q8IZC4 609 aa33.69■■■□□ 2.98
GSC-201ENST00000238558 SYNE4Q8N205 404 aa33.69■■■□□ 2.98
GSC-201ENST00000238558 CRAMP1Q96RY5 1269 aa33.69■■■□□ 2.98
GSC-201ENST00000238558 IL16Q14005 1332 aa33.69■■■□□ 2.98
GSC-201ENST00000238558 DICER1Q9UPY3 1922 aaKnown RBP33.69■■■□□ 2.98
GSC-201ENST00000238558 FKBP4Q02790 459 aaKnown RBP eCLIP33.68■■■□□ 2.98
GSC-201ENST00000238558 ISCA1Q9BUE6 129 aa33.68■■■□□ 2.98
GSC-201ENST00000238558 PHAXQ9H814 394 aaKnown RBP33.68■■■□□ 2.98
GSC-201ENST00000238558 CCDC30Q5VVM6 783 aa33.67■■■□□ 2.98
GSC-201ENST00000238558 CHMP4AQ9BY43 222 aa33.67■■■□□ 2.98
GSC-201ENST00000238558 SALL2Q9Y467 1007 aaPredicted RBP33.67■■■□□ 2.98
GSC-201ENST00000238558 SH3TC1Q8TE82 1336 aa33.67■■■□□ 2.98
GSC-201ENST00000238558 HCLS1P14317 486 aaPredicted RBP33.66■■■□□ 2.98
GSC-201ENST00000238558 FAM9BQ8IZU0 186 aa33.66■■■□□ 2.98
GSC-201ENST00000238558 ZNF428Q96B54 188 aa33.66■■■□□ 2.98
GSC-201ENST00000238558 ATP5J2-PTCD1G3V325 749 aa33.65■■■□□ 2.98
GSC-201ENST00000238558 GOLGA2Q08379 1002 aa33.65■■■□□ 2.98
GSC-201ENST00000238558 C16orf71Q8IYS4 520 aaPredicted RBP33.65■■■□□ 2.98
GSC-201ENST00000238558 ZNF277Q9NRM2 450 aaPredicted RBP33.65■■■□□ 2.98
GSC-201ENST00000238558 RIC3Q7Z5B4 369 aa33.64■■■□□ 2.98
GSC-201ENST00000238558 CC2D2BQ6DHV5 1058 aa33.63■■■□□ 2.97
GSC-201ENST00000238558 DPY19L2Q6NUT2 758 aa33.63■■■□□ 2.97
GSC-201ENST00000238558 SNED1Q8TER0 1413 aa33.62■■■□□ 2.97
GSC-201ENST00000238558 HSPA6P17066 643 aa33.62■■■□□ 2.97
GSC-201ENST00000238558 PPEF1O14829 653 aaPredicted RBP33.61■■■□□ 2.97
GSC-201ENST00000238558 TRIM28Q13263 835 aaKnown RBP33.61■■■□□ 2.97
GSC-201ENST00000238558 WDR63Q8IWG1 891 aa33.61■■■□□ 2.97
GSC-201ENST00000238558 RBM46Q8TBY0 533 aaKnown RBP33.61■■■□□ 2.97
GSC-201ENST00000238558 TCERG1O14776 1098 aaKnown RBP33.6■■■□□ 2.97
GSC-201ENST00000238558 CEP350Q5VT06 3117 aa33.6■■■□□ 2.97
GSC-201ENST00000238558 VEGFAP15692 232 aaPredicted RBP33.59■■■□□ 2.97
GSC-201ENST00000238558 TWISTNBQ3B726 338 aaPredicted RBP33.59■■■□□ 2.97
GSC-201ENST00000238558 SLC51AQ86UW1 340 aa33.59■■■□□ 2.97
GSC-201ENST00000238558 FAM89AQ96GI7 184 aa33.59■■■□□ 2.97
GSC-201ENST00000238558 PSMD1Q99460 953 aa33.59■■■□□ 2.97
GSC-201ENST00000238558 ABCC4O15439 1325 aa33.58■■■□□ 2.97
GSC-201ENST00000238558 IARSP41252 1262 aaKnown RBP33.57■■■□□ 2.96
GSC-201ENST00000238558 LAMB2P55268 1798 aa33.57■■■□□ 2.96
GSC-201ENST00000238558 FANCIQ9NVI1 1328 aa33.56■■■□□ 2.96
GSC-201ENST00000238558 POTECB2RU33 542 aa33.56■■■□□ 2.96
GSC-201ENST00000238558 GRIPAP1Q4V328 841 aa33.56■■■□□ 2.96
GSC-201ENST00000238558 DDX58O95786 925 aaKnown RBP33.55■■■□□ 2.96
GSC-201ENST00000238558 MYD88Q99836 296 aa33.55■■■□□ 2.96
GSC-201ENST00000238558 STK31Q9BXU1 1019 aa33.55■■■□□ 2.96
GSC-201ENST00000238558 ATP6V0A2Q9Y487 856 aa33.55■■■□□ 2.96
GSC-201ENST00000238558 DDNO94850 711 aaPredicted RBP33.54■■■□□ 2.96
GSC-201ENST00000238558 RTL5Q5HYW3 569 aaPredicted RBP33.54■■■□□ 2.96
GSC-201ENST00000238558 DDX46Q7L014 1031 aaKnown RBP33.54■■■□□ 2.96
GSC-201ENST00000238558 WDR90Q96KV7 1748 aa33.53■■■□□ 2.96
GSC-201ENST00000238558 BBOX1O75936 387 aa33.53■■■□□ 2.96
GSC-201ENST00000238558 FSTL1Q12841 308 aa33.52■■■□□ 2.96
GSC-201ENST00000238558 METTL22Q9BUU2 404 aaPredicted RBP33.52■■■□□ 2.96
GSC-201ENST00000238558 TMX4Q9H1E5 349 aaPredicted RBP33.52■■■□□ 2.96
GSC-201ENST00000238558 DDX60Q8IY21 1712 aaKnown RBP33.51■■■□□ 2.96
GSC-201ENST00000238558 IRS4O14654 1257 aaPredicted RBP33.5■■■□□ 2.95
GSC-201ENST00000238558 GRAPQ13588 217 aa33.5■■■□□ 2.95
GSC-201ENST00000238558 SF3B3Q15393 1217 aaKnown RBP33.5■■■□□ 2.95
GSC-201ENST00000238558 ZBTB38Q8NAP3 1195 aaPredicted RBP33.5■■■□□ 2.95
GSC-201ENST00000238558 CCDC191Q8NCU4 936 aa33.5■■■□□ 2.95
GSC-201ENST00000238558 GRAPLQ8TC17 118 aaPredicted RBP33.5■■■□□ 2.95
GSC-201ENST00000238558 SPINK5Q9NQ38 1064 aaPredicted RBP33.5■■■□□ 2.95
GSC-201ENST00000238558 MAP3K2Q9Y2U5 619 aa33.5■■■□□ 2.95
GSC-201ENST00000238558 KSR2Q6VAB6 950 aa33.49■■■□□ 2.95
GSC-201ENST00000238558 ZNF541Q9H0D2 1346 aa33.49■■■□□ 2.95
GSC-201ENST00000238558 PI4KAP2A4QPH2 592 aa33.48■■■□□ 2.95
GSC-201ENST00000238558 FZD9O00144 591 aa33.48■■■□□ 2.95
GSC-201ENST00000238558 SLC4A2P04920 1241 aa33.48■■■□□ 2.95
GSC-201ENST00000238558 G2E3Q7L622 706 aa33.48■■■□□ 2.95
GSC-201ENST00000238558 SP8Q8IXZ3 490 aa33.48■■■□□ 2.95
GSC-201ENST00000238558 PI4KAP1Q8N8J0 262 aa33.48■■■□□ 2.95
GSC-201ENST00000238558 VAMP4O75379 141 aa33.47■■■□□ 2.95
GSC-201ENST00000238558 EXOSC9Q06265 439 aaKnown RBP33.47■■■□□ 2.95
GSC-201ENST00000238558 SMC1BQ8NDV3 1235 aa33.47■■■□□ 2.95
GSC-201ENST00000238558 JDP2Q8WYK2 163 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms