RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
TTC1-201ENST00000231238 WDR17Q8IZU2 1322 aa12.44□□□□□ -0.42
TTC1-201ENST00000231238 A0A0G2JS52 829 aa12.44□□□□□ -0.42
TTC1-201ENST00000231238 ZKSCAN2Q63HK3 967 aa12.44□□□□□ -0.42
TTC1-201ENST00000231238 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
TTC1-201ENST00000231238 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
TTC1-201ENST00000231238 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
TTC1-201ENST00000231238 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
TTC1-201ENST00000231238 CHL1O00533 1208 aa12.43□□□□□ -0.42
TTC1-201ENST00000231238 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
TTC1-201ENST00000231238 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
TTC1-201ENST00000231238 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
TTC1-201ENST00000231238 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
TTC1-201ENST00000231238 NKX2-3Q8TAU0 364 aa12.43□□□□□ -0.42
TTC1-201ENST00000231238 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
TTC1-201ENST00000231238 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
TTC1-201ENST00000231238 RGPD2P0DJD1 1756 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 SSH1Q8WYL5 1049 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 BTG4Q9NY30 223 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
TTC1-201ENST00000231238 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
TTC1-201ENST00000231238 CRB1P82279 1406 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 ZPR1O75312 459 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 FUT2Q10981 343 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
TTC1-201ENST00000231238 VAMP4O75379 141 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 IFNL2Q8IZJ0 200 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 CLUAP1Q96AJ1 413 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 CARD10Q9BWT7 1032 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.42
TTC1-201ENST00000231238 COL18A1P39060 1754 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
TTC1-201ENST00000231238 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.43
TTC1-201ENST00000231238 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.43
TTC1-201ENST00000231238 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.43
TTC1-201ENST00000231238 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.43
TTC1-201ENST00000231238 DZIP1LQ8IYY4 767 aaKnown RBP12.4□□□□□ -0.43
TTC1-201ENST00000231238 PANK1Q8TE04 598 aa12.4□□□□□ -0.43
TTC1-201ENST00000231238 BABAM1Q9NWV8 329 aa12.4□□□□□ -0.43
TTC1-201ENST00000231238 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.43
TTC1-201ENST00000231238 ABCA3Q99758 1704 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 BTBD11A6QL63 1104 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 IL2RBP14784 551 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 TTLL12Q14166 644 aaPredicted RBP12.39□□□□□ -0.43
TTC1-201ENST00000231238 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
TTC1-201ENST00000231238 SSTR3P32745 418 aaPredicted RBP12.38□□□□□ -0.43
TTC1-201ENST00000231238 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
TTC1-201ENST00000231238 CHMP4AQ9BY43 222 aa12.38□□□□□ -0.43
TTC1-201ENST00000231238 MEGF6O75095 1541 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 PHKG2P15735 406 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 MORN1Q5T089 497 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
TTC1-201ENST00000231238 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 ZCRB1Q8TBF4 217 aaKnown RBP12.37□□□□□ -0.43
TTC1-201ENST00000231238 CCDC9Q9Y3X0 531 aaKnown RBP12.37□□□□□ -0.43
TTC1-201ENST00000231238 PLEKHG2Q9H7P9 1386 aa12.37□□□□□ -0.43
TTC1-201ENST00000231238 TLL1O43897 1013 aa12.36□□□□□ -0.43
TTC1-201ENST00000231238 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
TTC1-201ENST00000231238 PCDH11XQ9BZA7 1347 aa12.36□□□□□ -0.43
TTC1-201ENST00000231238 PCDH11YQ9BZA8 1340 aa12.36□□□□□ -0.43
TTC1-201ENST00000231238 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
TTC1-201ENST00000231238 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
TTC1-201ENST00000231238 PDE4DQ08499 809 aa12.35□□□□□ -0.43
TTC1-201ENST00000231238 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
TTC1-201ENST00000231238 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
TTC1-201ENST00000231238 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
TTC1-201ENST00000231238 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
TTC1-201ENST00000231238 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
TTC1-201ENST00000231238 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
TTC1-201ENST00000231238 COL22A1Q8NFW1 1626 aaPredicted RBP12.35□□□□□ -0.43
TTC1-201ENST00000231238 TRIM27P14373 513 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 CABP4P57796 275 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
TTC1-201ENST00000231238 AAMPQ13685 434 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
TTC1-201ENST00000231238 JCADQ9P266 1359 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 KDM4AO75164 1064 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 NR1I2O75469 434 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
TTC1-201ENST00000231238 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 ARHGAP45Q92619 1136 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
TTC1-201ENST00000231238 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
TTC1-201ENST00000231238 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
TTC1-201ENST00000231238 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms