RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 STK38Q15208 465 aa18.68■□□□□ 0.58
TMEM30A-201ENST00000230461 SH2B1Q9NRF2 756 aaPredicted RBP18.68■□□□□ 0.58
TMEM30A-201ENST00000230461 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
TMEM30A-201ENST00000230461 C6orf229H3BNL8 230 aa18.68■□□□□ 0.58
TMEM30A-201ENST00000230461 ZNF213O14771 459 aa18.68■□□□□ 0.58
TMEM30A-201ENST00000230461 CCDC83Q8IWF9 413 aa18.68■□□□□ 0.58
TMEM30A-201ENST00000230461 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 CCDC191Q8NCU4 936 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 ESYT1Q9BSJ8 1104 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 CARD10Q9BWT7 1032 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 MCM4P33991 863 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 ABCC4O15439 1325 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 NBPF7P0C2Y1 421 aaPredicted RBP18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 CEBPZQ03701 1054 aaKnown RBP18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
TMEM30A-201ENST00000230461 PES1O00541 588 aaKnown RBP18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 FAM89AQ96GI7 184 aa18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 KINO60870 393 aaKnown RBP18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 USP5P45974 858 aa18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 ZSCAN29Q8IWY8 852 aaPredicted RBP18.66■□□□□ 0.58
TMEM30A-201ENST00000230461 ZFYP08048 801 aaPredicted RBP18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 ST5P78524 1137 aa18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 ARHGEF40Q8TER5 1519 aa18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 JMYQ8N9B5 988 aa18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 NYXQ9GZU5 481 aa18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 TCEAL9Q9UHQ7 104 aa18.65■□□□□ 0.58
TMEM30A-201ENST00000230461 GCKRQ14397 625 aa18.64■□□□□ 0.58
TMEM30A-201ENST00000230461 WDR17Q8IZU2 1322 aa18.64■□□□□ 0.58
TMEM30A-201ENST00000230461 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.57
TMEM30A-201ENST00000230461 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
TMEM30A-201ENST00000230461 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.57
TMEM30A-201ENST00000230461 USP21Q9UK80 565 aa18.64■□□□□ 0.57
TMEM30A-201ENST00000230461 TFCP2Q12800 502 aa18.63■□□□□ 0.57
TMEM30A-201ENST00000230461 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
TMEM30A-201ENST00000230461 SPATA31A3Q5VYP0 1347 aa18.63■□□□□ 0.57
TMEM30A-201ENST00000230461 PNMA6EA0A0J9YXQ4 647 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 GNPATO15228 680 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 RNF41Q9H4P4 317 aaPredicted RBP18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 MRE11P49959 708 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 PARP10Q53GL7 1025 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 POLR3DP05423 398 aaPredicted RBP18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 LAMC1P11047 1609 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 LETM1O95202 739 aaPredicted RBP18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 USP44Q9H0E7 712 aa18.62■□□□□ 0.57
TMEM30A-201ENST00000230461 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 LDHCP07864 332 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 TMOD2Q9NZR1 351 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 EYA2O00167 538 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 RNF214Q8ND24 703 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 MKNK2Q9HBH9 465 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 ME1P48163 572 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 IL27Q8NEV9 243 aa18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 OTUD7AQ8TE49 926 aaPredicted RBP18.61■□□□□ 0.57
TMEM30A-201ENST00000230461 ANAPC15P60006 121 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 FERMT3Q86UX7 667 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 NEK1Q96PY6 1258 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 CFAP45Q9UL16 551 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 PTPRMP28827 1452 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 TPM3P06753 285 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 ANKRD20A12PQ8NF67 263 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 HELBQ8NG08 1087 aaPredicted RBP18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 BRPF1P55201 1214 aaPredicted RBP18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 MCMDC2Q4G0Z9 681 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 WASF1Q92558 559 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 PAG1Q9NWQ8 432 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
TMEM30A-201ENST00000230461 HAND2P61296 217 aa18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 IQCA1Q86XH1 822 aa18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 RBM8AQ9Y5S9 174 aaKnown RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 LARP6Q9BRS8 491 aaKnown RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 IQSEC3Q9UPP2 1182 aaPredicted RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 RANBP6O60518 1105 aaKnown RBP18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 KLHDC4Q8TBB5 520 aa18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 TFCP2L1Q9NZI6 479 aa18.59■□□□□ 0.57
TMEM30A-201ENST00000230461 ADAMTS13Q76LX8 1427 aa18.58■□□□□ 0.57
TMEM30A-201ENST00000230461 CCDC196A0A1B0GTZ2 297 aa18.58■□□□□ 0.57
TMEM30A-201ENST00000230461 TPM2P07951 284 aa18.58■□□□□ 0.57
TMEM30A-201ENST00000230461 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.57
TMEM30A-201ENST00000230461 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.579e-7■■□□□ 14.2
TMEM30A-201ENST00000230461 SPATA32Q96LK8 384 aa18.58■□□□□ 0.57
TMEM30A-201ENST00000230461 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.56
TMEM30A-201ENST00000230461 TPM1P09493 284 aa18.58■□□□□ 0.56
TMEM30A-201ENST00000230461 CHMLP26374 656 aa18.58■□□□□ 0.56
TMEM30A-201ENST00000230461 NASPP49321 788 aaPredicted RBP18.58■□□□□ 0.56
TMEM30A-201ENST00000230461 GLIPR1L2Q4G1C9 344 aa18.58■□□□□ 0.56
TMEM30A-201ENST00000230461 NAT10Q9H0A0 1025 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms